RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 IFM1P25038 676 aa0.17□□□□□ -2.38
snR56snR56 YBR220CP38318 560 aa0.17□□□□□ -2.38
snR56snR56 VAB2P40003 282 aa0.17□□□□□ -2.38
snR56snR56 BUD21Q08492 214 aaPredicted RBP0.17□□□□□ -2.38
snR56snR56 YEL009C-AA0A023PZF2 135 aa0.16□□□□□ -2.38
snR56snR56 RPE1P46969 238 aa0.16□□□□□ -2.38
snR56snR56 RGS2Q99188 309 aa0.16□□□□□ -2.38
snR56snR56 FPR1P20081 114 aaKnown RBP0.15□□□□□ -2.39
snR56snR56 UBA1P22515 1024 aaKnown RBP0.15□□□□□ -2.39
snR56snR56 YPL039WQ03080 316 aa0.15□□□□□ -2.39
snR56snR56 YLL053CP0CD98 152 aa0.14□□□□□ -2.39
snR56snR56 ACB1P31787 87 aa0.14□□□□□ -2.39
snR56snR56 RPL37AP49166 88 aaKnown RBP0.14□□□□□ -2.39
snR56snR56 SNX41Q04053 625 aa0.14□□□□□ -2.39
snR56snR56 ECM18Q04623 453 aa0.14□□□□□ -2.39
snR56snR56 DCN1Q12395 269 aa0.14□□□□□ -2.39
snR56snR56 SMC6Q12749 1114 aa0.14□□□□□ -2.39
snR56snR56 RDS1P25611 832 aa0.13□□□□□ -2.39
snR56snR56 MDL1P33310 695 aa0.13□□□□□ -2.39
snR56snR56 CAJ1P39101 391 aa0.13□□□□□ -2.39
snR56snR56 YJL055WP47044 245 aa0.13□□□□□ -2.39
snR56snR56 AAH1P53909 347 aa0.13□□□□□ -2.39
snR56snR56 BUR2Q05949 395 aa0.13□□□□□ -2.39
snR56snR56 POX1P13711 748 aa0.12□□□□□ -2.39
snR56snR56 MCH2P36032 473 aa0.12□□□□□ -2.39
snR56snR56 YPT32P51996 222 aaKnown RBP0.12□□□□□ -2.39
snR56snR56 PEX12Q04370 399 aa0.12□□□□□ -2.39
snR56snR56 RPL6BP05739 176 aaKnown RBP0.11□□□□□ -2.39
snR56snR56 BMH1P29311 267 aaKnown RBP0.11□□□□□ -2.39
snR56snR56 PXA2P34230 853 aa0.11□□□□□ -2.39
snR56snR56 SPT8P38915 602 aa0.11□□□□□ -2.39
snR56snR56 AVT7P40501 490 aa0.11□□□□□ -2.39
snR56snR56 SNX4P47057 423 aa0.11□□□□□ -2.39
snR56snR56 RPL6AQ02326 176 aaKnown RBP0.11□□□□□ -2.39
snR56snR56 UTP23Q12339 254 aaKnown RBP0.11□□□□□ -2.39
snR56snR56 TFB5Q3E7C1 72 aaPredicted RBP0.11□□□□□ -2.39
snR56snR56 YGR016WP53209 190 aa0.1□□□□□ -2.39
snR56snR56 RPL2AP0CX45 254 aaKnown RBP0.09□□□□□ -2.4
snR56snR56 RPL2BP0CX46 254 aaKnown RBP0.09□□□□□ -2.4
snR56snR56 VMA5P31412 392 aaKnown RBP0.09□□□□□ -2.4
snR56snR56 IMP3P32899 183 aaPredicted RBP0.09□□□□□ -2.4
snR56snR56 PHO89P38361 574 aa0.09□□□□□ -2.4
snR56snR56 YHB1P39676 399 aaKnown RBP0.09□□□□□ -2.4
snR56snR56 SHQ1P40486 507 aaPredicted RBP0.09□□□□□ -2.4
snR56snR56 RPL37BP51402 88 aaKnown RBP0.09□□□□□ -2.4
snR56snR56 IRC4Q03036 179 aa0.09□□□□□ -2.4
snR56snR56 ERG2P32352 222 aa0.08□□□□□ -2.4
snR56snR56 KDX1P36005 433 aa0.08□□□□□ -2.4
snR56snR56 YSW1P38280 609 aa0.08□□□□□ -2.4
snR56snR56 GDT1P38301 280 aaPredicted RBP0.08□□□□□ -2.4
snR56snR56 YML6P51998 286 aa0.08□□□□□ -2.4
snR56snR56 RVB1Q03940 463 aaKnown RBP0.08□□□□□ -2.4
snR56snR56 VPH1P32563 840 aaKnown RBP0.07□□□□□ -2.4
snR56snR56 COT1P32798 439 aa0.07□□□□□ -2.4
snR56snR56 YPC1P38298 316 aa0.07□□□□□ -2.4
snR56snR56 YBR219CP38317 127 aa0.07□□□□□ -2.4
snR56snR56 YHR035WP38769 630 aa0.07□□□□□ -2.4
snR56snR56 ALP1P38971 573 aa0.07□□□□□ -2.4
snR56snR56 PRP39P39682 629 aaKnown RBP0.07□□□□□ -2.4
snR56snR56 VPS9P54787 451 aa0.07□□□□□ -2.4
snR56snR56 SCL1P21243 252 aaKnown RBP0.06□□□□□ -2.4
snR56snR56 GDH2P33327 1092 aaKnown RBP0.06□□□□□ -2.4
snR56snR56 POP8P38208 133 aa0.06□□□□□ -2.4
snR56snR56 SHC1P39000 512 aa0.06□□□□□ -2.4
snR56snR56 CSI2Q08054 341 aa0.06□□□□□ -2.4
snR56snR56 PAR32Q12515 295 aaKnown RBP0.06□□□□□ -2.4
snR56snR56 SPO24Q3E752 67 aa0.06□□□□□ -2.4
snR56snR56 FBA1P14540 359 aaKnown RBP0.05□□□□□ -2.4
snR56snR56 MDH2P22133 377 aa0.05□□□□□ -2.4
snR56snR56 HUA1P40325 198 aa0.05□□□□□ -2.4
snR56snR56 RPA34P47006 233 aaPredicted RBP0.05□□□□□ -2.4
snR56snR56 AEP1P32493 518 aa0.04□□□□□ -2.4
snR56snR56 SEN34P39707 275 aa0.04□□□□□ -2.4
snR56snR56 BMT5P40493 336 aa0.04□□□□□ -2.4
snR56snR56 TAD2P47058 250 aa0.04□□□□□ -2.4
snR56snR56 UBC13P52490 153 aa0.04□□□□□ -2.4
snR56snR56 MHT1Q12525 324 aa0.04□□□□□ -2.4
snR56snR56 DPB2P24482 689 aaPredicted RBP0.03□□□□□ -2.4
snR56snR56 MNE1P24720 663 aa0.03□□□□□ -2.4
snR56snR56 DRE2P36152 348 aa0.03□□□□□ -2.4
snR56snR56 VAR1P02381 398 aa0.02□□□□□ -2.41
snR56snR56 CCA1P21269 546 aa0.02□□□□□ -2.41
snR56snR56 CSG2P35206 410 aa0.02□□□□□ -2.41
snR56snR56 PRM15Q03262 622 aa0.02□□□□□ -2.41
snR56snR56 DSF1P0CX08 502 aa0.01□□□□□ -2.41
snR56snR56 YNR073CP0CX09 502 aa0.01□□□□□ -2.41
snR56snR56 ARN2P38724 620 aa0.01□□□□□ -2.41
snR56snR56 SMT3Q12306 101 aaKnown RBP0.01□□□□□ -2.41
snR56snR56 SAS5Q99314 248 aa0.01□□□□□ -2.41
snR56snR56 VMA2P16140 517 aaKnown RBP0□□□□□ -2.41
snR56snR56 PPH21P23594 369 aa0□□□□□ -2.41
snR56snR56 PEX4P29340 183 aa0□□□□□ -2.41
snR56snR56 ZRT1P32804 376 aa0□□□□□ -2.41
snR56snR56 YHI9P38765 294 aa0□□□□□ -2.41
snR56snR56 GDI1P39958 451 aaKnown RBP0□□□□□ -2.41
snR56snR56 VTC1P40046 129 aaRIP-Chip data0□□□□□ -2.41not detected
snR56snR56 RIO1Q12196 484 aaKnown RBP0□□□□□ -2.41
snR56snR56 GEP5Q12393 293 aa0□□□□□ -2.41
snR56snR56 TCD1P38756 429 aa-0.01□□□□□ -2.41
snR56snR56 YDR262WQ12331 272 aa-0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms