RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	PUT3	P25502	979 aa	Predicted RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	SFK1	P35735	353 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	SSO2	P39926	295 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	YIL024C	P40543	189 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	HIS6	P40545	261 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	FAF1	P40546	346 aa	Predicted RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	CAF16	P43569	289 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	LOH1	P47055	219 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	YGL235W	P53071	178 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	ERG26	P53199	349 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
PDH1	YPR002W	ODC1	Q03028	310 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	SNX41	Q04053	625 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	UTP15	Q04305	513 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	NAT4	Q04751	285 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	PEX30	Q06169	523 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	ANT1	Q06497	328 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	GRC3	Q07845	632 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	YOR385W	Q08909	290 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	VPS68	Q12016	184 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	BTS1	Q12051	335 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	RTC5	Q12108	567 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	LYS21	Q12122	440 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	ADK1	P07170	222 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	MCK1	P21965	375 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	FUN19	P28003	413 aa	Predicted RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	MRP17	P28778	131 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	ITR1	P30605	584 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	SSH4	P32343	579 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	ERG1	P32476	496 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	SUA5	P32579	426 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	FLO10	P36170	1169 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	MAL32	P38158	584 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
PDH1	YPR002W	MAL12	P53341	584 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	ATG10	Q07879	167 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	XYL2	Q07993	356 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	RPS21B	Q3E754	87 aa	Known RBP	4.99	□□□□□ -1.61
PDH1	YPR002W	FSH3	Q99369	266 aa		4.99	□□□□□ -1.61
PDH1	YPR002W	INH1	P01097	85 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	PRB1	P09232	635 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YKR104W	P0CE69	306 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	RPB5	P20434	215 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	MAG1	P22134	296 aa	Known RBP	4.98	□□□□□ -1.61
PDH1	YPR002W	SEC22	P22214	214 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	GPI12	P23797	304 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	BOS1	P25385	244 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	PMT2	P31382	759 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	SRB6	P32570	121 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	MRPL37	P36532	105 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	LAG1	P38703	411 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	COS8	P38723	381 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	PZF1	P39933	429 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	BMT5	P40493	336 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YJR120W	P47157	116 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YGL159W	P53110	370 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	VHT1	P53241	593 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YPL113C	Q02961	396 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	NMA1	Q06178	401 aa	Known RBP	4.98	□□□□□ -1.61
PDH1	YPR002W	YLR352W	Q06479	807 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	PUS9	Q12069	462 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YDL177C	Q12257	170 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YRM1	Q12340	786 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	EAF3	Q12432	401 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	AHC1	Q12433	566 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	VMA9	Q3E7B6	73 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	YKL033W-A	Q86ZR7	236 aa		4.98	□□□□□ -1.61
PDH1	YPR002W	DET1	Q99288	334 aa	Known RBP	4.98	□□□□□ -1.61
PDH1	YPR002W	ARO3	P14843	370 aa	Known RBP	4.97	□□□□□ -1.61
PDH1	YPR002W	CNE1	P27825	502 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	LDS1	P31379	325 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	PEX32	P38292	413 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	ECM34	P38728	170 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	SDP1	P40479	209 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	RPL10	P41805	221 aa	Known RBP	4.97	□□□□□ -1.61
PDH1	YPR002W	SNN1	P48232	102 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	YGL204C	P53089	101 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	SNT309	Q06091	175 aa	Predicted RBP	4.97	□□□□□ -1.61
PDH1	YPR002W	TAZ1	Q06510	381 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	PFA4	Q12006	378 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	TRM13	Q12383	476 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	YLR111W	Q12528	110 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	Q0142	Q9ZZW4	58 aa		4.97	□□□□□ -1.61
PDH1	YPR002W	STE50	P25344	346 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	MRP20	P32387	263 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	MTC4	P38335	694 aa	Known RBP	4.96	□□□□□ -1.62
PDH1	YPR002W	GCV3	P39726	170 aa	Predicted RBP	4.96	□□□□□ -1.62
PDH1	YPR002W	UTP25	P40498	721 aa	Known RBP	4.96	□□□□□ -1.62
PDH1	YPR002W	LYS20	P48570	428 aa	Known RBP	4.96	□□□□□ -1.62
PDH1	YPR002W	NIT3	P49954	291 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	CAC2	Q04199	468 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	FDH1	Q08911	376 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	YOR114W	Q12219	294 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	DFG16	Q99234	619 aa		4.96	□□□□□ -1.62
PDH1	YPR002W	PHO2	P07269	559 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	CHO1	P08456	276 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	APA2	P22108	325 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	ERG4	P25340	473 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	NAM9	P27929	486 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	RPS0A	P32905	252 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms