RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	MRX3	P38172	270 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	DIA4	P38705	446 aa	Predicted RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	RRP4	P38792	359 aa	Known RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	OXA1	P39952	402 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	GAT2	P40209	560 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	RPN11	P43588	306 aa	Known RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	ASG7	P46993	209 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	AZR1	P50080	613 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	ORC5	P50874	479 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	NBP1	P52919	319 aa	Predicted RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	NUP49	Q02199	472 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	DYN2	Q02647	92 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	CAC2	Q04199	468 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	NKP2	Q06162	153 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YLR031W	Q07978	186 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	SIA1	Q12212	622 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YRF1-2	P40105	1681 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	FKS3	Q04952	1785 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YCR102C	P25608	368 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	MSK1	P32048	576 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YCR087C-A	P37263	153 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	RRP3	P38712	501 aa	Known RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	ARN1	P38731	627 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	VPS52	P39904	641 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	CSM2	P40465	213 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YPS6	P40583	537 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	CIN2	P46670	268 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	ADO1	P47143	340 aa	Known RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	YPT32	P51996	222 aa	Known RBP	3.58	□□□□□ -1.84
GCD1	YOR260W	VEL1	P53058	206 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	YGR168C	P53293	376 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	COG5	P53951	403 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	RSM23	Q01163	450 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	NUP53	Q03790	475 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	PLP1	Q04004	230 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	SSK1	Q07084	712 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	SGT1	Q08446	395 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	FSH3	Q99369	266 aa		3.58	□□□□□ -1.84
GCD1	YOR260W	ADE6	P38972	1358 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	RPS28B	P0C0X0	67 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	RSA4	P25382	515 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	MXR2	P25566	168 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	GSP1	P32835	219 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	GSP2	P32836	220 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	ATO2	P32907	282 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	YKL187C	P34231	750 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	SOR1	P35497	357 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	YKR041W	P36134	250 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	ARP1	P38696	384 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	RMD6	P39975	231 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	YMR134W	P40207	237 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	PAC11	P40960	533 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	YFH7	P43591	353 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	FAR3	P46671	204 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	PHO86	P46956	311 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	CTK3	P46963	296 aa	Predicted RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	TIS11	P47977	285 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	PHB2	P50085	310 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	ORM1	P53224	222 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	CWC25	P53854	179 aa	Known RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	YML096W	Q04489	525 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	NAT4	Q04751	285 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	BCH1	Q05029	724 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	DPP1	Q05521	289 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	YET3	Q07451	203 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	SOR2	Q07786	357 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	LDB18	Q07887	179 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	HNT3	Q08702	217 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	BBP1	Q12365	385 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	AGC1	Q12482	902 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.57	□□□□□ -1.84
GCD1	YOR260W	YCL001W-B	Q96VH2	84 aa		3.57	□□□□□ -1.84
GCD1	YOR260W	DUR1,2	P32528	1835 aa	Known RBP	3.56	□□□□□ -1.84
GCD1	YOR260W	OPI3	P05375	206 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	CBP6	P07253	162 aa	Predicted RBP	3.56	□□□□□ -1.84
GCD1	YOR260W	MCK1	P21965	375 aa	Known RBP	3.56	□□□□□ -1.84
GCD1	YOR260W	YCR006C	P25350	157 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	POP5	P28005	173 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	MRPL6	P32904	214 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	SGE1	P33335	543 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	TVP38	P36164	337 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	VHC1	P38329	1120 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	RCK2	P38623	610 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	INM1	P38710	295 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	WSC4	P38739	605 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	MBB1	P39534	108 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	SNL1	P40548	159 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	TOS2	P50078	622 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	ALG13	P53178	202 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	NRK1	P53915	240 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	PRM6	Q04705	352 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	MRX9	Q07349	420 aa	Known RBP	3.56	□□□□□ -1.84
GCD1	YOR260W	LDS2	Q08218	356 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	YNG1	Q08465	219 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	ATX2	Q12067	313 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	NCE102	Q12207	173 aa	RIP-Chip data	3.56	□□□□□ -1.84	not detected
GCD1	YOR260W	COR1	P07256	457 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	RPL12A	P0CX53	165 aa	Known RBP	3.56	□□□□□ -1.84
GCD1	YOR260W	RPL12B	P0CX54	165 aa		3.56	□□□□□ -1.84
GCD1	YOR260W	RPB8	P20436	146 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms