RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W YNL165WP53891 406 aa8.34□□□□□ -1.07
MSB4YOL112W RCE1Q03530 315 aa8.34□□□□□ -1.07
MSB4YOL112W SYC1Q08553 188 aaPredicted RBP8.34□□□□□ -1.07
MSB4YOL112W YOR378WQ08902 515 aa8.34□□□□□ -1.07
MSB4YOL112W FRE5Q08908 694 aa8.34□□□□□ -1.07
MSB4YOL112W THP3Q12049 470 aaKnown RBP8.34□□□□□ -1.07
MSB4YOL112W NKP1Q12493 238 aa8.34□□□□□ -1.07
MSB4YOL112W MSW1P04803 379 aa8.33□□□□□ -1.08
MSB4YOL112W MDH1P17505 334 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
MSB4YOL112W CNA1P23287 553 aa8.33□□□□□ -1.08
MSB4YOL112W SRP102P36057 244 aaPredicted RBP8.33□□□□□ -1.08
MSB4YOL112W YGP1P38616 354 aaKnown RBP8.33□□□□□ -1.08
MSB4YOL112W YER084WP40057 128 aa8.33□□□□□ -1.08
MSB4YOL112W SDP1P40479 209 aa8.33□□□□□ -1.08
MSB4YOL112W MOB2P43563 287 aa8.33□□□□□ -1.08
MSB4YOL112W MRX10Q05648 414 aa8.33□□□□□ -1.08
MSB4YOL112W MRL1Q06815 381 aa8.33□□□□□ -1.08
MSB4YOL112W ACF2Q12168 779 aa8.33□□□□□ -1.08
MSB4YOL112W RPA135P22138 1203 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W NTA1P40354 457 aa8.32□□□□□ -1.08
MSB4YOL112W FMC1P40491 155 aa8.32□□□□□ -1.08
MSB4YOL112W HAS1Q03532 505 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W AIM36Q03798 255 aa8.32□□□□□ -1.08
MSB4YOL112W MRX8Q05473 314 aa8.32□□□□□ -1.08
MSB4YOL112W RBS1Q05672 457 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W NNT1Q05874 261 aa8.32□□□□□ -1.08
MSB4YOL112W MCT1Q12283 360 aa8.32□□□□□ -1.08
MSB4YOL112W VCX1Q99385 411 aa8.32□□□□□ -1.08
MSB4YOL112W MEK1P24719 497 aaPredicted RBP8.32□□□□□ -1.08
MSB4YOL112W ITR1P30605 584 aa8.32□□□□□ -1.08
MSB4YOL112W MTR2P34232 184 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W THI2P38141 450 aa8.32□□□□□ -1.08
MSB4YOL112W SLZ1P40167 298 aa8.32□□□□□ -1.08
MSB4YOL112W PFS2P42841 465 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W PAM16P42949 149 aa8.32□□□□□ -1.08
MSB4YOL112W TNA1P53322 534 aa8.32□□□□□ -1.08
MSB4YOL112W RPL6AQ02326 176 aaKnown RBP8.32□□□□□ -1.08
MSB4YOL112W BPH1P25356 2167 aa8.31□□□□□ -1.08
MSB4YOL112W DBF2P22204 572 aa8.31□□□□□ -1.08
MSB4YOL112W PUT3P25502 979 aaPredicted RBP8.31□□□□□ -1.08
MSB4YOL112W VMA6P32366 345 aaKnown RBP8.31□□□□□ -1.08
MSB4YOL112W AVT7P40501 490 aa8.31□□□□□ -1.08
MSB4YOL112W TMA20P89886 181 aaPredicted RBP8.31□□□□□ -1.08
MSB4YOL112W PRP3Q03338 469 aaPredicted RBP8.31□□□□□ -1.08
MSB4YOL112W MAK3Q03503 176 aa8.31□□□□□ -1.08
MSB4YOL112W YLR346CQ06139 101 aa8.31□□□□□ -1.08
MSB4YOL112W RBD2Q12270 262 aa8.31□□□□□ -1.08
MSB4YOL112W IZH2Q12442 317 aa8.31□□□□□ -1.08
MSB4YOL112W YGL041W-AP0C5N3 154 aa8.3□□□□□ -1.08
MSB4YOL112W BOS1P25385 244 aa8.3□□□□□ -1.08
MSB4YOL112W PUB1P32588 453 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
MSB4YOL112W SDS22P36047 338 aa8.3□□□□□ -1.08
MSB4YOL112W YPK3P38070 525 aa8.3□□□□□ -1.08
MSB4YOL112W BUR6P40096 142 aa8.3□□□□□ -1.08
MSB4YOL112W SIP18P50263 79 aa8.3□□□□□ -1.08
MSB4YOL112W NOG1Q02892 647 aaKnown RBP8.3□□□□□ -1.08
MSB4YOL112W YDR387CQ04162 555 aa8.3□□□□□ -1.08
MSB4YOL112W YOL114CQ12322 202 aa8.3□□□□□ -1.08
MSB4YOL112W ERG4P25340 473 aa8.29□□□□□ -1.08
MSB4YOL112W YMR144WP40214 342 aaKnown RBP8.29□□□□□ -1.08
MSB4YOL112W TIR3P40552 269 aa8.29□□□□□ -1.08
MSB4YOL112W EFM3P47163 339 aa8.29□□□□□ -1.08
MSB4YOL112W HLR1Q04429 423 aa8.29□□□□□ -1.08
MSB4YOL112W YMR252CQ04814 134 aa8.29□□□□□ -1.08
MSB4YOL112W NEJ1Q06148 342 aa8.29□□□□□ -1.08
MSB4YOL112W THI72Q08579 599 aa8.29□□□□□ -1.08
MSB4YOL112W FIT3Q08907 204 aa8.29□□□□□ -1.08
MSB4YOL112W RNH203Q12338 110 aa8.29□□□□□ -1.08
MSB4YOL112W COX5BP00425 151 aa8.28□□□□□ -1.08
MSB4YOL112W SCEIP03882 235 aa8.28□□□□□ -1.08
MSB4YOL112W ARO7P32178 256 aa8.28□□□□□ -1.08
MSB4YOL112W NVJ1P38881 321 aa8.28□□□□□ -1.08
MSB4YOL112W ACS1Q01574 713 aa8.28□□□□□ -1.08
MSB4YOL112W YDR179W-AQ03983 463 aa8.28□□□□□ -1.08
MSB4YOL112W RPL35AP0CX84 120 aaKnown RBP8.27□□□□□ -1.09
MSB4YOL112W RPL35BP0CX85 120 aaKnown RBP8.27□□□□□ -1.09
MSB4YOL112W PEX32P38292 413 aa8.27□□□□□ -1.09
MSB4YOL112W PMT6P42934 759 aa8.27□□□□□ -1.09
MSB4YOL112W LOH1P47055 219 aa8.27□□□□□ -1.09
MSB4YOL112W SCW11P53189 542 aa8.27□□□□□ -1.09
MSB4YOL112W PAU12P53343 120 aa8.27□□□□□ -1.09
MSB4YOL112W BRE4Q07660 1125 aa8.27□□□□□ -1.09
MSB4YOL112W RSC58Q07979 502 aa8.27□□□□□ -1.09
MSB4YOL112W NCE102Q12207 173 aaRIP-Chip data8.27□□□□□ -1.09not detected
MSB4YOL112W TY1A-NL1Q12391 440 aaKnown RBP8.27□□□□□ -1.09
MSB4YOL112W RRI1Q12468 440 aa8.27□□□□□ -1.09
MSB4YOL112W FUN26P31381 517 aa8.26□□□□□ -1.09
MSB4YOL112W MTC2P34246 357 aa8.26□□□□□ -1.09
MSB4YOL112W YBR220CP38318 560 aa8.26□□□□□ -1.09
MSB4YOL112W QDR1P40475 563 aa8.26□□□□□ -1.09
MSB4YOL112W CCC1P47818 322 aa8.26□□□□□ -1.09
MSB4YOL112W MTM1P53320 366 aa8.26□□□□□ -1.09
MSB4YOL112W SPO19Q03029 223 aa8.26□□□□□ -1.09
MSB4YOL112W ATG17Q06410 417 aa8.26□□□□□ -1.09
MSB4YOL112W YPR1Q12458 312 aa8.26□□□□□ -1.09
MSB4YOL112W FRE6Q12473 712 aa8.26□□□□□ -1.09
MSB4YOL112W PDA1P16387 420 aaKnown RBP8.26□□□□□ -1.09
MSB4YOL112W SPT10P35208 640 aa8.26□□□□□ -1.09
MSB4YOL112W ANR2P36090 516 aaPredicted RBP8.26□□□□□ -1.09
MSB4YOL112W TAT1P38085 619 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms