RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W LSG1P53145 640 aaKnown RBP2.78□□□□□ -1.96
MSH2YOL090W NRD1P53617 575 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
MSH2YOL090W THI20Q08224 551 aa2.78□□□□□ -1.96
MSH2YOL090W YOL073CQ08232 322 aa2.78□□□□□ -1.96
MSH2YOL090W ESA1Q08649 445 aa2.78□□□□□ -1.96
MSH2YOL090W ILV1P00927 576 aaKnown RBP2.78□□□□□ -1.97
MSH2YOL090W TPI1P00942 248 aaKnown RBP2.78□□□□□ -1.97
MSH2YOL090W URA6P15700 204 aa2.78□□□□□ -1.97
MSH2YOL090W RPB8P20436 146 aa2.78□□□□□ -1.97
MSH2YOL090W SPO11P23179 398 aa2.78□□□□□ -1.97
MSH2YOL090W HRR25P29295 494 aaKnown RBP2.78□□□□□ -1.97
MSH2YOL090W ELM1P32801 640 aa2.78□□□□□ -1.97
MSH2YOL090W MCH2P36032 473 aa2.78□□□□□ -1.97
MSH2YOL090W ECM8P38246 354 aa2.78□□□□□ -1.97
MSH2YOL090W YHK8P38776 514 aa2.78□□□□□ -1.97
MSH2YOL090W SNO1Q03144 224 aa2.78□□□□□ -1.97
MSH2YOL090W ARC18Q05933 178 aaKnown RBP2.78□□□□□ -1.97
MSH2YOL090W MFG1Q07684 458 aa2.78□□□□□ -1.97
MSH2YOL090W YAP7Q08182 245 aa2.78□□□□□ -1.97
MSH2YOL090W SGT1Q08446 395 aa2.78□□□□□ -1.97
MSH2YOL090W RDL1Q12305 139 aaKnown RBP2.78□□□□□ -1.97
MSH2YOL090W HEM1P09950 548 aaPredicted RBP2.77□□□□□ -1.97
MSH2YOL090W CBS2P14905 389 aa2.77□□□□□ -1.97
MSH2YOL090W EXO70P19658 623 aa2.77□□□□□ -1.97
MSH2YOL090W CPR3P25719 182 aa2.77□□□□□ -1.97
MSH2YOL090W CDC13P32797 924 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W SPC34P36131 295 aa2.77□□□□□ -1.97
MSH2YOL090W GEP4P38812 185 aa2.77□□□□□ -1.97
MSH2YOL090W YJR149WP47177 404 aa2.77□□□□□ -1.97
MSH2YOL090W ERG13P54839 491 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W BET5Q03630 159 aa2.77□□□□□ -1.97
MSH2YOL090W SNX41Q04053 625 aa2.77□□□□□ -1.97
MSH2YOL090W SWF1Q04629 336 aa2.77□□□□□ -1.97
MSH2YOL090W LOA1Q06508 300 aa2.77□□□□□ -1.97
MSH2YOL090W YLR012CQ07927 99 aa2.77□□□□□ -1.97
MSH2YOL090W TPT1Q12272 230 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W LYS2P07702 1392 aa2.77□□□□□ -1.97
MSH2YOL090W REP1P03871 373 aa2.77□□□□□ -1.97
MSH2YOL090W TFS1P14306 219 aa2.77□□□□□ -1.97
MSH2YOL090W PHO80P20052 293 aa2.77□□□□□ -1.97
MSH2YOL090W YCR100CP25606 316 aa2.77□□□□□ -1.97
MSH2YOL090W TIR2P33890 251 aa2.77□□□□□ -1.97
MSH2YOL090W VPS52P39904 641 aa2.77□□□□□ -1.97
MSH2YOL090W AGE2P40529 298 aa2.77□□□□□ -1.97
MSH2YOL090W MRPL49P40858 161 aaPredicted RBP2.77□□□□□ -1.97
MSH2YOL090W TES1P41903 349 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W ASG7P46993 209 aa2.77□□□□□ -1.97
MSH2YOL090W YJL043WP47053 257 aa2.77□□□□□ -1.97
MSH2YOL090W UBC13P52490 153 aa2.77□□□□□ -1.97
MSH2YOL090W MSO1P53604 210 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W GOR1P53839 350 aa2.77□□□□□ -1.97
MSH2YOL090W YLR460CP54007 376 aa2.77□□□□□ -1.97
MSH2YOL090W YDR209CQ03480 137 aa2.77□□□□□ -1.97
MSH2YOL090W YMR206WQ03695 313 aa2.77□□□□□ -1.97
MSH2YOL090W YDL144CQ07589 356 aa2.77□□□□□ -1.97
MSH2YOL090W IRC10Q08118 586 aa2.77□□□□□ -1.97
MSH2YOL090W TAF10Q12030 206 aa2.77□□□□□ -1.97
MSH2YOL090W BSC1Q12140 328 aa2.77□□□□□ -1.97
MSH2YOL090W WTM1Q12363 437 aaKnown RBP2.77□□□□□ -1.97
MSH2YOL090W PUT1P09368 476 aa2.76□□□□□ -1.97
MSH2YOL090W SNA3P14359 133 aa2.76□□□□□ -1.97
MSH2YOL090W CDC10P25342 322 aaKnown RBP2.76□□□□□ -1.97
MSH2YOL090W NAM9P27929 486 aa2.76□□□□□ -1.97
MSH2YOL090W TPS2P31688 896 aaKnown RBP2.76□□□□□ -1.97
MSH2YOL090W YOX1P34161 385 aa2.76□□□□□ -1.97
MSH2YOL090W PHD1P36093 366 aa2.76□□□□□ -1.97
MSH2YOL090W COX15P40086 486 aa2.76□□□□□ -1.97
MSH2YOL090W COG3P40094 801 aa2.76□□□□□ -1.97
MSH2YOL090W RRT5P43607 289 aa2.76□□□□□ -1.97
MSH2YOL090W LSM1P47017 172 aaKnown RBP2.76□□□□□ -1.97
MSH2YOL090W YJR141WP47172 347 aaPredicted RBP2.76□□□□□ -1.97
MSH2YOL090W VHT1P53241 593 aa2.76□□□□□ -1.97
MSH2YOL090W PER33Q12144 273 aa2.76□□□□□ -1.97
MSH2YOL090W YCT1Q12235 531 aa2.76□□□□□ -1.97
MSH2YOL090W SME1Q12330 94 aaPredicted RBP2.76□□□□□ -1.97
MSH2YOL090W DCN1Q12395 269 aa2.76□□□□□ -1.97
MSH2YOL090W LSO2Q3E772 92 aaKnown RBP2.76□□□□□ -1.97
MSH2YOL090W TIP1P27654 210 aaPredicted RBP2.76□□□□□ -1.97
MSH2YOL090W ITR2P30606 609 aa2.76□□□□□ -1.97
MSH2YOL090W PMT2P31382 759 aa2.76□□□□□ -1.97
MSH2YOL090W YKL075CP36083 450 aa2.76□□□□□ -1.97
MSH2YOL090W POP7P38291 140 aa2.76□□□□□ -1.97
MSH2YOL090W YBP1P38315 674 aa2.76□□□□□ -1.97
MSH2YOL090W SRP14P38985 146 aa2.76□□□□□ -1.97
MSH2YOL090W CSM2P40465 213 aa2.76□□□□□ -1.97
MSH2YOL090W MIC26P50087 233 aa2.76□□□□□ -1.97
MSH2YOL090W PEX31P53203 462 aa2.76□□□□□ -1.97
MSH2YOL090W RNY1Q02933 434 aaKnown RBP2.76□□□□□ -1.97
MSH2YOL090W CCE1Q03702 353 aa2.76□□□□□ -1.97
MSH2YOL090W PEX12Q04370 399 aa2.76□□□□□ -1.97
MSH2YOL090W YML096WQ04489 525 aa2.76□□□□□ -1.97
MSH2YOL090W SFH1Q06168 426 aa2.76□□□□□ -1.97
MSH2YOL090W DXO1Q06349 442 aa2.76□□□□□ -1.97
MSH2YOL090W JLP1Q12358 412 aa2.76□□□□□ -1.97
MSH2YOL090W BI2P03873 423 aa2.75□□□□□ -1.97
MSH2YOL090W QCR2P07257 368 aa2.75□□□□□ -1.97
MSH2YOL090W CPT1P17898 393 aa2.75□□□□□ -1.97
MSH2YOL090W YCR022CP25620 114 aa2.75□□□□□ -1.97
MSH2YOL090W SPT4P32914 102 aaPredicted RBP2.75□□□□□ -1.97
MSH2YOL090W YBR137WP38276 179 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms