RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W ECM19Q06011 112 aa1.87□□□□□ -2.11
CSI1YMR025W SPH1Q06160 661 aa1.87□□□□□ -2.11
CSI1YMR025W APC5Q08683 685 aa1.87□□□□□ -2.11
CSI1YMR025W RPN8Q08723 338 aaKnown RBP1.87□□□□□ -2.11
CSI1YMR025W YDR524C-BQ3E6R4 66 aa1.87□□□□□ -2.11
CSI1YMR025W VPS63O13549 108 aa1.86□□□□□ -2.11
CSI1YMR025W RAD1P06777 1100 aa1.86□□□□□ -2.11
CSI1YMR025W YLL053CP0CD98 152 aa1.86□□□□□ -2.11
CSI1YMR025W POX1P13711 748 aa1.86□□□□□ -2.11
CSI1YMR025W SNA3P14359 133 aa1.86□□□□□ -2.11
CSI1YMR025W CIN8P27895 1000 aa1.86□□□□□ -2.11
CSI1YMR025W RME1P32338 300 aaKnown RBP1.86□□□□□ -2.11
CSI1YMR025W PCH2P38126 564 aa1.86□□□□□ -2.11
CSI1YMR025W IST2P38250 946 aa1.86□□□□□ -2.11
CSI1YMR025W VPS45P38932 577 aa1.86□□□□□ -2.11
CSI1YMR025W POP2P39008 433 aa1.86□□□□□ -2.11
CSI1YMR025W LSG1P53145 640 aaKnown RBP1.86□□□□□ -2.11
CSI1YMR025W LSB1P53281 241 aa1.86□□□□□ -2.11
CSI1YMR025W CSM3Q04659 317 aa1.86□□□□□ -2.11
CSI1YMR025W YPR063CQ12160 140 aa1.86□□□□□ -2.11
CSI1YMR025W ERP3Q12403 225 aa1.86□□□□□ -2.11
CSI1YMR025W YDR034W-BQ6Q5X2 51 aa1.86□□□□□ -2.11
CSI1YMR025W PDR18P53756 1333 aa1.86□□□□□ -2.11
CSI1YMR025W FLO1P32768 1537 aa1.86□□□□□ -2.11
CSI1YMR025W KRR1P25586 316 aaPredicted RBP1.85□□□□□ -2.11
CSI1YMR025W MYO3P36006 1272 aa1.85□□□□□ -2.11
CSI1YMR025W PHO88P38264 188 aaPredicted RBP1.85□□□□□ -2.11
CSI1YMR025W IML3P38265 245 aa1.85□□□□□ -2.11
CSI1YMR025W LIN1P38852 340 aaPredicted RBP1.85□□□□□ -2.11
CSI1YMR025W PRP39P39682 629 aaKnown RBP1.85□□□□□ -2.11
CSI1YMR025W HMF1P40037 129 aaKnown RBP1.85□□□□□ -2.11
CSI1YMR025W YCH1P42937 148 aa1.85□□□□□ -2.11
CSI1YMR025W YGL114WP53134 725 aa1.85□□□□□ -2.11
CSI1YMR025W LIF1P53150 421 aa1.85□□□□□ -2.11
CSI1YMR025W YNL146WP53906 100 aa1.85□□□□□ -2.11
CSI1YMR025W YPL080CQ02826 108 aa1.85□□□□□ -2.11
CSI1YMR025W INP1Q03694 420 aa1.85□□□□□ -2.11
CSI1YMR025W YMR244WQ04018 355 aa1.85□□□□□ -2.11
CSI1YMR025W RRB1Q04225 511 aaKnown RBP1.85□□□□□ -2.11
CSI1YMR025W YMR321CQ04898 105 aa1.85□□□□□ -2.11
CSI1YMR025W CSF1Q12150 2958 aa1.84□□□□□ -2.11
CSI1YMR025W TDH2P00358 332 aaKnown RBP1.84□□□□□ -2.11
CSI1YMR025W TDH3P00359 332 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
CSI1YMR025W ARF2P19146 181 aaKnown RBP1.84□□□□□ -2.11
CSI1YMR025W BUD2P33314 1104 aa1.84□□□□□ -2.11
CSI1YMR025W TVP38P36164 337 aa1.84□□□□□ -2.11
CSI1YMR025W ABZ2Q03266 374 aa1.84□□□□□ -2.11
CSI1YMR025W STE23Q06010 1027 aa1.84□□□□□ -2.11
CSI1YMR025W TAF10Q12030 206 aa1.84□□□□□ -2.11
CSI1YMR025W REX3Q12090 404 aa1.84□□□□□ -2.11
CSI1YMR025W DFM1Q12743 341 aaKnown RBP1.84□□□□□ -2.11
CSI1YMR025W TRA1P38811 3744 aa1.84□□□□□ -2.12
CSI1YMR025W IRA1P18963 3092 aa1.84□□□□□ -2.12
CSI1YMR025W STF1P01098 86 aa1.83□□□□□ -2.12
CSI1YMR025W MAK31P23059 88 aa1.83□□□□□ -2.12
CSI1YMR025W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CSI1YMR025W PEX32P38292 413 aa1.83□□□□□ -2.12
CSI1YMR025W RRG9P40156 214 aa1.83□□□□□ -2.12
CSI1YMR025W YMR134WP40207 237 aa1.83□□□□□ -2.12
CSI1YMR025W BUD13P46947 266 aaPredicted RBP1.83□□□□□ -2.12
CSI1YMR025W PRO2P54885 456 aaKnown RBP1.83□□□□□ -2.12
CSI1YMR025W MYO5Q04439 1219 aaKnown RBP1.83□□□□□ -2.12
CSI1YMR025W RGS2Q99188 309 aa1.83□□□□□ -2.12
CSI1YMR025W RNR2P09938 399 aaKnown RBP1.82□□□□□ -2.12
CSI1YMR025W GAL3P13045 520 aa1.82□□□□□ -2.12
CSI1YMR025W KRE1P17260 313 aa1.82□□□□□ -2.12
CSI1YMR025W ITR2P30606 609 aa1.82□□□□□ -2.12
CSI1YMR025W SUR1P33300 382 aa1.82□□□□□ -2.12
CSI1YMR025W ZRT3P34240 503 aa1.82□□□□□ -2.12
CSI1YMR025W SMF2P38778 549 aa1.82□□□□□ -2.12
CSI1YMR025W MED6P38782 295 aa1.82□□□□□ -2.12
CSI1YMR025W TVP23P38962 199 aa1.82□□□□□ -2.12
CSI1YMR025W OSW5P40219 148 aa1.82□□□□□ -2.12
CSI1YMR025W BTT1P40314 149 aaPredicted RBP1.82□□□□□ -2.12
CSI1YMR025W AIM20P40451 204 aa1.82□□□□□ -2.12
CSI1YMR025W BUR2Q05949 395 aa1.82□□□□□ -2.12
CSI1YMR025W SUE1Q06524 206 aa1.82□□□□□ -2.12
CSI1YMR025W YDR262WQ12331 272 aa1.82□□□□□ -2.12
CSI1YMR025W RPN6Q12377 434 aa1.82□□□□□ -2.12
CSI1YMR025W OPY1P38271 328 aa1.81□□□□□ -2.12
CSI1YMR025W YIL054WP40524 105 aa1.81□□□□□ -2.12
CSI1YMR025W MNN5P46982 586 aa1.81□□□□□ -2.12
CSI1YMR025W PXR1P53335 271 aaPredicted RBP1.81□□□□□ -2.12
CSI1YMR025W YDR114CQ04597 100 aa1.81□□□□□ -2.12
CSI1YMR025W DXO1Q06349 442 aa1.81□□□□□ -2.12
CSI1YMR025W YPL264CQ08980 353 aa1.81□□□□□ -2.12
CSI1YMR025W CDC37P06101 506 aaKnown RBP1.8□□□□□ -2.12
CSI1YMR025W RPL18AP0CX49 186 aaKnown RBP1.8□□□□□ -2.12
CSI1YMR025W RPL18BP0CX50 186 aaKnown RBP1.8□□□□□ -2.12
CSI1YMR025W CTA1P15202 515 aa1.8□□□□□ -2.12
CSI1YMR025W ERG9P29704 444 aa1.8□□□□□ -2.12
CSI1YMR025W DRE2P36152 348 aa1.8□□□□□ -2.12
CSI1YMR025W RFT1P38206 574 aaPredicted RBP1.8□□□□□ -2.12
CSI1YMR025W RCK1P38622 512 aa1.8□□□□□ -2.12
CSI1YMR025W MMS21P38632 267 aa1.8□□□□□ -2.12
CSI1YMR025W CAX4P53223 239 aa1.8□□□□□ -2.12
CSI1YMR025W FMP48P53233 369 aa1.8□□□□□ -2.12
CSI1YMR025W YGR168CP53293 376 aa1.8□□□□□ -2.12
CSI1YMR025W YNL134CP53912 376 aaKnown RBP1.8□□□□□ -2.12
CSI1YMR025W VPS20Q04272 221 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms