RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C NHP10Q03435 203 aa3.01□□□□□ -1.93
VPS33YLR396C SPO77Q06134 477 aa3.01□□□□□ -1.93
VPS33YLR396C YRM1Q12340 786 aa3.01□□□□□ -1.93
VPS33YLR396C RRP12Q12754 1228 aaKnown RBP3.01□□□□□ -1.93
VPS33YLR396C CMC2Q3E7A4 109 aa3.01□□□□□ -1.93
VPS33YLR396C THP2O13539 261 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C COS2P0CX12 379 aa3□□□□□ -1.93
VPS33YLR396C COS3P0CX13 379 aa3□□□□□ -1.93
VPS33YLR396C MER1P16523 270 aa3□□□□□ -1.93
VPS33YLR396C CDC42P19073 191 aa3□□□□□ -1.93
VPS33YLR396C PEX34P25584 144 aa3□□□□□ -1.93
VPS33YLR396C ITR1P30605 584 aa3□□□□□ -1.93
VPS33YLR396C YSC83P32792 385 aa3□□□□□ -1.93
VPS33YLR396C MRPL6P32904 214 aa3□□□□□ -1.93
VPS33YLR396C SDH3P33421 198 aa3□□□□□ -1.93
VPS33YLR396C PTI1P39927 425 aaPredicted RBP3□□□□□ -1.93
VPS33YLR396C AIM24P47127 394 aa3□□□□□ -1.93
VPS33YLR396C YJR141WP47172 347 aaPredicted RBP3□□□□□ -1.93
VPS33YLR396C YIF1P53845 314 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C RMI1Q02685 241 aa3□□□□□ -1.93
VPS33YLR396C ARV1Q06541 321 aa3□□□□□ -1.93
VPS33YLR396C HNT3Q08702 217 aa3□□□□□ -1.93
VPS33YLR396C YOR283WQ12040 230 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C AI5_BETAQ9ZZX0 354 aa3□□□□□ -1.93
VPS33YLR396C CHS1P08004 1131 aa3□□□□□ -1.93
VPS33YLR396C FUS3P16892 353 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C HPR1P17629 752 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C SPT10P35208 640 aa3□□□□□ -1.93
VPS33YLR396C GEP4P38812 185 aa3□□□□□ -1.93
VPS33YLR396C PRP24P49960 444 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C PMT5P52867 743 aa3□□□□□ -1.93
VPS33YLR396C HHO1P53551 258 aa3□□□□□ -1.93
VPS33YLR396C LSM3P57743 89 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C EGD1Q02642 157 aaKnown RBP3□□□□□ -1.93
VPS33YLR396C MRP51Q02950 344 aa3□□□□□ -1.93
VPS33YLR396C YLR283WQ05867 314 aa3□□□□□ -1.93
VPS33YLR396C CUR1Q06469 252 aa3□□□□□ -1.93
VPS33YLR396C SLD7Q08457 257 aa3□□□□□ -1.93
VPS33YLR396C DCN1Q12395 269 aa3□□□□□ -1.93
VPS33YLR396C HMS1Q12398 434 aa3□□□□□ -1.93
VPS33YLR396C ISA2Q12425 185 aa3□□□□□ -1.93
VPS33YLR396C YCL021W-AQ96VH3 125 aa3□□□□□ -1.93
VPS33YLR396C RIB3Q99258 208 aa3□□□□□ -1.93
VPS33YLR396C SAS5Q99314 248 aa3□□□□□ -1.93
VPS33YLR396C REP2P03872 296 aa2.99□□□□□ -1.93
VPS33YLR396C SCEIP03882 235 aa2.99□□□□□ -1.93
VPS33YLR396C YFR010W-AP0C5N0 62 aa2.99□□□□□ -1.93
VPS33YLR396C CPR1P14832 162 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C CPR2P23285 205 aa2.99□□□□□ -1.93
VPS33YLR396C PHO91P27514 894 aa2.99□□□□□ -1.93
VPS33YLR396C DED81P38707 554 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C PES4P39684 611 aa2.99□□□□□ -1.93
VPS33YLR396C COG3P40094 801 aa2.99□□□□□ -1.93
VPS33YLR396C YIR035CP40579 254 aa2.99□□□□□ -1.93
VPS33YLR396C ERG10P41338 398 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C YJL132WP47014 750 aa2.99□□□□□ -1.93
VPS33YLR396C NQM1P53228 333 aaPredicted RBP2.99□□□□□ -1.93
VPS33YLR396C RPT4P53549 437 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C YNR068CP53754 272 aa2.99□□□□□ -1.93
VPS33YLR396C ERV25P54837 211 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C GAS3Q03655 524 aa2.99□□□□□ -1.93
VPS33YLR396C AIM36Q03798 255 aa2.99□□□□□ -1.93
VPS33YLR396C CDC123Q05791 360 aa2.99□□□□□ -1.93
VPS33YLR396C YPL199CQ08954 240 aa2.99□□□□□ -1.93
VPS33YLR396C YLL056CQ12177 298 aa2.99□□□□□ -1.93
VPS33YLR396C YLR126CQ12288 251 aa2.99□□□□□ -1.93
VPS33YLR396C ERP4Q12450 207 aa2.99□□□□□ -1.93
VPS33YLR396C SUS1Q6WNK7 96 aa2.99□□□□□ -1.93
VPS33YLR396C MAS1P10507 462 aa2.99□□□□□ -1.93
VPS33YLR396C HSP26P15992 214 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
VPS33YLR396C SAM2P19358 384 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C PHO80P20052 293 aa2.99□□□□□ -1.93
VPS33YLR396C CKS1P20486 150 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C YCL068CP25593 260 aa2.99□□□□□ -1.93
VPS33YLR396C TIP1P27654 210 aaPredicted RBP2.99□□□□□ -1.93
VPS33YLR396C RIM1P32445 135 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C PDC2P32896 925 aa2.99□□□□□ -1.93
VPS33YLR396C SOR1P35497 357 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C SRY1P36007 326 aa2.99□□□□□ -1.93
VPS33YLR396C MRPL37P36532 105 aa2.99□□□□□ -1.93
VPS33YLR396C MBA1P38300 278 aa2.99□□□□□ -1.93
VPS33YLR396C VPS45P38932 577 aa2.99□□□□□ -1.93
VPS33YLR396C MST28P39552 234 aa2.99□□□□□ -1.93
VPS33YLR396C AGE2P40529 298 aa2.99□□□□□ -1.93
VPS33YLR396C YJL218WP40892 196 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C ZIM17P42844 174 aa2.99□□□□□ -1.93
VPS33YLR396C YGR067CP53243 804 aa2.99□□□□□ -1.93
VPS33YLR396C MNT4P53745 580 aa2.99□□□□□ -1.93
VPS33YLR396C BOR1P53838 576 aa2.99□□□□□ -1.93
VPS33YLR396C LSM7P53905 115 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C ALG11P53954 548 aaKnown RBP2.99□□□□□ -1.93
VPS33YLR396C SLM2P53955 656 aa2.99□□□□□ -1.93
VPS33YLR396C PRM15Q03262 622 aa2.99□□□□□ -1.93
VPS33YLR396C AIM32Q04689 311 aa2.99□□□□□ -1.93
VPS33YLR396C SOR2Q07786 357 aa2.99□□□□□ -1.93
VPS33YLR396C RRG7Q08774 242 aaPredicted RBP2.99□□□□□ -1.93
VPS33YLR396C AEP3Q12089 606 aa2.99□□□□□ -1.93
VPS33YLR396C YPR063CQ12160 140 aa2.99□□□□□ -1.93
VPS33YLR396C RPS18AP0CX55 146 aaKnown RBP2.98□□□□□ -1.93
VPS33YLR396C RPS18BP0CX56 146 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms