RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W MCH1Q07376 486 aa1.12□□□□□ -2.23
SLX4YLR135W TFC7Q12415 435 aa1.12□□□□□ -2.23
SLX4YLR135W YAL064W-BO13512 126 aa1.12□□□□□ -2.23
SLX4YLR135W PET494P07390 489 aaPredicted RBP1.12□□□□□ -2.23
SLX4YLR135W CDC13P32797 924 aaKnown RBP1.12□□□□□ -2.23
SLX4YLR135W COT1P32798 439 aa1.12□□□□□ -2.23
SLX4YLR135W MRPL6P32904 214 aa1.12□□□□□ -2.23
SLX4YLR135W MRPL3P36516 390 aa1.12□□□□□ -2.23
SLX4YLR135W YBR062CP38239 180 aa1.12□□□□□ -2.23
SLX4YLR135W YHL044WP38727 235 aa1.12□□□□□ -2.23
SLX4YLR135W YIL054WP40524 105 aa1.12□□□□□ -2.23
SLX4YLR135W YFL012WP43580 148 aa1.12□□□□□ -2.23
SLX4YLR135W COQ5P49017 307 aa1.12□□□□□ -2.23
SLX4YLR135W FMP48P53233 369 aa1.12□□□□□ -2.23
SLX4YLR135W CPD1P53314 239 aa1.12□□□□□ -2.23
SLX4YLR135W YMR209CQ03648 457 aa1.12□□□□□ -2.23
SLX4YLR135W INP1Q03694 420 aa1.12□□□□□ -2.23
SLX4YLR135W TAF9Q05027 157 aa1.12□□□□□ -2.23
SLX4YLR135W BOP2Q06150 570 aa1.12□□□□□ -2.23
SLX4YLR135W YDL144CQ07589 356 aa1.12□□□□□ -2.23
SLX4YLR135W YOL029CQ08187 201 aa1.12□□□□□ -2.23
SLX4YLR135W TIR4Q12218 487 aaPredicted RBP1.12□□□□□ -2.23
SLX4YLR135W SME1Q12330 94 aaPredicted RBP1.12□□□□□ -2.23
SLX4YLR135W MED4Q12343 284 aa1.12□□□□□ -2.23
SLX4YLR135W YBL111CQ3E7Y5 667 aa1.12□□□□□ -2.23
SLX4YLR135W YOS9Q99220 542 aa1.12□□□□□ -2.23
SLX4YLR135W RPS3P05750 240 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W RPB9P27999 122 aa1.11□□□□□ -2.23
SLX4YLR135W PRS4P38063 326 aaPredicted RBP1.11□□□□□ -2.23
SLX4YLR135W HSM3P38348 480 aa1.11□□□□□ -2.23
SLX4YLR135W FRT2P39734 528 aa1.11□□□□□ -2.23
SLX4YLR135W DSN1P40568 576 aa1.11□□□□□ -2.23
SLX4YLR135W COG7P53195 279 aa1.11□□□□□ -2.23
SLX4YLR135W MNT4P53745 580 aa1.11□□□□□ -2.23
SLX4YLR135W SMD1Q02260 146 aaPredicted RBP1.11□□□□□ -2.23
SLX4YLR135W SDC1Q03323 175 aa1.11□□□□□ -2.23
SLX4YLR135W VPS60Q03390 229 aa1.11□□□□□ -2.23
SLX4YLR135W YMR244WQ04018 355 aa1.11□□□□□ -2.23
SLX4YLR135W ECM11Q04110 302 aa1.11□□□□□ -2.23
SLX4YLR135W UTP15Q04305 513 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W SFH1Q06168 426 aa1.11□□□□□ -2.23
SLX4YLR135W SEC10Q06245 871 aa1.11□□□□□ -2.23
SLX4YLR135W CTS2Q06350 511 aa1.11□□□□□ -2.23
SLX4YLR135W ARV1Q06541 321 aa1.11□□□□□ -2.23
SLX4YLR135W BSC6Q08280 497 aa1.11□□□□□ -2.23
SLX4YLR135W YAL063C-AQ3E791 96 aa1.11□□□□□ -2.23
SLX4YLR135W RPP0P05317 312 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W RAD3P06839 778 aa1.11□□□□□ -2.23
SLX4YLR135W VPS1P21576 704 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W COX10P21592 462 aa1.11□□□□□ -2.23
SLX4YLR135W POF1P25576 258 aa1.11□□□□□ -2.23
SLX4YLR135W ATG15P25641 520 aa1.11□□□□□ -2.23
SLX4YLR135W ZRT3P34240 503 aa1.11□□□□□ -2.23
SLX4YLR135W MRX3P38172 270 aa1.11□□□□□ -2.23
SLX4YLR135W PRS2P38620 318 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W ASP1P38986 381 aaPredicted RBP1.11□□□□□ -2.23
SLX4YLR135W EDC2P40023 145 aaPredicted RBP1.11□□□□□ -2.23
SLX4YLR135W ASG7P46993 209 aa1.11□□□□□ -2.23
SLX4YLR135W UFD1P53044 361 aa1.11□□□□□ -2.23
SLX4YLR135W FLC3P53121 802 aa1.11□□□□□ -2.23
SLX4YLR135W SWS2P53937 143 aa1.11□□□□□ -2.23
SLX4YLR135W ALG11P53954 548 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W CDC14Q00684 551 aa1.11□□□□□ -2.23
SLX4YLR135W LOA1Q06508 300 aa1.11□□□□□ -2.23
SLX4YLR135W SDO1Q07953 250 aaKnown RBP1.11□□□□□ -2.23
SLX4YLR135W CSM4Q08955 156 aa1.11□□□□□ -2.23
SLX4YLR135W STH1P32597 1359 aa1.11□□□□□ -2.23
SLX4YLR135W HIS1P00498 297 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W FUS3P16892 353 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W PHO80P20052 293 aa1.1□□□□□ -2.23
SLX4YLR135W OSM1P21375 501 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W DAL82P21705 255 aa1.1□□□□□ -2.23
SLX4YLR135W YCR025CP25352 136 aa1.1□□□□□ -2.23
SLX4YLR135W TPS2P31688 896 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W ALK2P32789 676 aaPredicted RBP1.1□□□□□ -2.23
SLX4YLR135W ATG12P38316 186 aa1.1□□□□□ -2.23
SLX4YLR135W YHI9P38765 294 aa1.1□□□□□ -2.23
SLX4YLR135W TRR2P38816 342 aa1.1□□□□□ -2.23
SLX4YLR135W SEN34P39707 275 aa1.1□□□□□ -2.23
SLX4YLR135W BDH1P39714 382 aa1.1□□□□□ -2.23
SLX4YLR135W KRE29P40026 464 aa1.1□□□□□ -2.23
SLX4YLR135W FMC1P40491 155 aa1.1□□□□□ -2.23
SLX4YLR135W SER33P40510 469 aa1.1□□□□□ -2.23
SLX4YLR135W YJL118WP47022 219 aa1.1□□□□□ -2.23
SLX4YLR135W LIA1P47120 325 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W PRP24P49960 444 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W NBP35P52920 328 aa1.1□□□□□ -2.23
SLX4YLR135W YGL118CP53132 145 aa1.1□□□□□ -2.23
SLX4YLR135W YNL134CP53912 376 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W TIM11P81449 96 aaPredicted RBP1.1□□□□□ -2.23
SLX4YLR135W YPL113CQ02961 396 aa1.1□□□□□ -2.23
SLX4YLR135W OST6Q03723 332 aa1.1□□□□□ -2.23
SLX4YLR135W YLR283WQ05867 314 aa1.1□□□□□ -2.23
SLX4YLR135W ARC18Q05933 178 aaKnown RBP1.1□□□□□ -2.23
SLX4YLR135W PER33Q12144 273 aa1.1□□□□□ -2.23
SLX4YLR135W ATG31Q12421 196 aa1.1□□□□□ -2.23
SLX4YLR135W SNF8Q12483 233 aa1.1□□□□□ -2.23
SLX4YLR135W AUS1Q08409 1394 aa1.1□□□□□ -2.23
SLX4YLR135W CCH1P50077 2039 aa1.1□□□□□ -2.23
SLX4YLR135W CUP2P15315 225 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms