RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W ZIP1P31111 875 aa3.59□□□□□ -1.83
YJR028WYJR028W SPS19P32573 292 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W ATG12P38316 186 aa3.59□□□□□ -1.83
YJR028WYJR028W YGL262WP53054 175 aa3.59□□□□□ -1.83
YJR028WYJR028W PEX31P53203 462 aa3.59□□□□□ -1.83
YJR028WYJR028W FMP48P53233 369 aa3.59□□□□□ -1.83
YJR028WYJR028W RNY1Q02933 434 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W ADH6Q04894 360 aaKnown RBP3.59□□□□□ -1.83
YJR028WYJR028W VIK1Q12045 647 aa3.59□□□□□ -1.83
YJR028WYJR028W TRM10Q12400 293 aa3.59□□□□□ -1.83
YJR028WYJR028W TFC7Q12415 435 aa3.59□□□□□ -1.83
YJR028WYJR028W HIS1P00498 297 aaKnown RBP3.58□□□□□ -1.84
YJR028WYJR028W ASP3-2P0CX77 362 aa3.58□□□□□ -1.84
YJR028WYJR028W ASP3-3P0CX78 362 aa3.58□□□□□ -1.84
YJR028WYJR028W ASP3-4P0CX79 362 aa3.58□□□□□ -1.84
YJR028WYJR028W ASP3-1P0CZ17 362 aa3.58□□□□□ -1.84
YJR028WYJR028W YCR025CP25352 136 aa3.58□□□□□ -1.84
YJR028WYJR028W ATG15P25641 520 aa3.58□□□□□ -1.84
YJR028WYJR028W VPH2P32341 215 aa3.58□□□□□ -1.84
YJR028WYJR028W CDC13P32797 924 aaKnown RBP3.58□□□□□ -1.84
YJR028WYJR028W FRM2P37261 193 aa3.58□□□□□ -1.84
YJR028WYJR028W PRS2P38620 318 aaKnown RBP3.58□□□□□ -1.84
YJR028WYJR028W DED81P38707 554 aaKnown RBP3.58□□□□□ -1.84
YJR028WYJR028W RRT13P40042 185 aa3.58□□□□□ -1.84
YJR028WYJR028W TAD2P47058 250 aa3.58□□□□□ -1.84
YJR028WYJR028W HAL1Q01766 294 aa3.58□□□□□ -1.84
YJR028WYJR028W PET117Q02771 107 aa3.58□□□□□ -1.84
YJR028WYJR028W RUD3Q12234 484 aaKnown RBP3.58□□□□□ -1.84
YJR028WYJR028W REV1P12689 985 aa3.57□□□□□ -1.84
YJR028WYJR028W EPT1P22140 391 aa3.57□□□□□ -1.84
YJR028WYJR028W SER33P40510 469 aa3.57□□□□□ -1.84
YJR028WYJR028W VEL1P53058 206 aa3.57□□□□□ -1.84
YJR028WYJR028W SWS2P53937 143 aa3.57□□□□□ -1.84
YJR028WYJR028W INP1Q03694 420 aa3.57□□□□□ -1.84
YJR028WYJR028W YMR244WQ04018 355 aa3.57□□□□□ -1.84
YJR028WYJR028W PIN3Q06449 215 aa3.57□□□□□ -1.84
YJR028WYJR028W YOL029CQ08187 201 aa3.57□□□□□ -1.84
YJR028WYJR028W SME1Q12330 94 aaPredicted RBP3.57□□□□□ -1.84
YJR028WYJR028W DFM1Q12743 341 aaKnown RBP3.57□□□□□ -1.84
YJR028WYJR028W YAL067W-AQ8TGK6 75 aa3.57□□□□□ -1.84
YJR028WYJR028W PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
YJR028WYJR028W ZRT3P34240 503 aa3.56□□□□□ -1.84
YJR028WYJR028W UTH1P36135 365 aa3.56□□□□□ -1.84
YJR028WYJR028W MRX3P38172 270 aa3.56□□□□□ -1.84
YJR028WYJR028W YER184CP39961 794 aa3.56□□□□□ -1.84
YJR028WYJR028W YER085CP40058 173 aa3.56□□□□□ -1.84
YJR028WYJR028W NBP1P52919 319 aaPredicted RBP3.56□□□□□ -1.84
YJR028WYJR028W ACT1P60010 375 aaKnown RBP3.56□□□□□ -1.84
YJR028WYJR028W VPS60Q03390 229 aa3.56□□□□□ -1.84
YJR028WYJR028W ECM19Q06011 112 aa3.56□□□□□ -1.84
YJR028WYJR028W SEC10Q06245 871 aa3.56□□□□□ -1.84
YJR028WYJR028W MSH5Q12175 901 aa3.56□□□□□ -1.84
YJR028WYJR028W YAL063C-AQ3E791 96 aa3.56□□□□□ -1.84
YJR028WYJR028W RPS5P26783 225 aaKnown RBP3.55□□□□□ -1.84
YJR028WYJR028W DBP7P36120 742 aaKnown RBP3.55□□□□□ -1.84
YJR028WYJR028W GCN20P43535 752 aaKnown RBP3.55□□□□□ -1.84
YJR028WYJR028W YFL064CP43540 174 aa3.55□□□□□ -1.84
YJR028WYJR028W MIC19P43594 170 aa3.55□□□□□ -1.84
YJR028WYJR028W HIT1P46973 164 aa3.55□□□□□ -1.84
YJR028WYJR028W ASG7P46993 209 aa3.55□□□□□ -1.84
YJR028WYJR028W NBP35P52920 328 aa3.55□□□□□ -1.84
YJR028WYJR028W LIF1P53150 421 aa3.55□□□□□ -1.84
YJR028WYJR028W MAL13P53338 473 aa3.55□□□□□ -1.84
YJR028WYJR028W YLR283WQ05867 314 aa3.55□□□□□ -1.84
YJR028WYJR028W DIB1Q06819 143 aaPredicted RBP3.55□□□□□ -1.84
YJR028WYJR028W TIR4Q12218 487 aaPredicted RBP3.55□□□□□ -1.84
YJR028WYJR028W PSK1P31374 1356 aa3.54□□□□□ -1.84
YJR028WYJR028W YAL064W-BO13512 126 aa3.54□□□□□ -1.84
YJR028WYJR028W MRP1P10662 321 aaKnown RBP3.54□□□□□ -1.84
YJR028WYJR028W RPB9P27999 122 aa3.54□□□□□ -1.84
YJR028WYJR028W MSN4P33749 630 aa3.54□□□□□ -1.84
YJR028WYJR028W AVT7P40501 490 aa3.54□□□□□ -1.84
YJR028WYJR028W GLG2P47011 380 aa3.54□□□□□ -1.84
YJR028WYJR028W SDC1Q03323 175 aa3.54□□□□□ -1.84
YJR028WYJR028W CTR3Q06686 241 aa3.54□□□□□ -1.84
YJR028WYJR028W PAM18Q07914 168 aa3.54□□□□□ -1.84
YJR028WYJR028W YOS9Q99220 542 aa3.54□□□□□ -1.84
YJR028WYJR028W TDH2P00358 332 aaKnown RBP3.53□□□□□ -1.84
YJR028WYJR028W RPO26P20435 155 aa3.53□□□□□ -1.84
YJR028WYJR028W COX10P21592 462 aa3.53□□□□□ -1.84
YJR028WYJR028W PEX3P28795 441 aa3.53□□□□□ -1.84
YJR028WYJR028W ALK2P32789 676 aaPredicted RBP3.53□□□□□ -1.84
YJR028WYJR028W AIM29P36154 155 aa3.53□□□□□ -1.84
YJR028WYJR028W MRPL3P36516 390 aa3.53□□□□□ -1.84
YJR028WYJR028W SHC1P39000 512 aa3.53□□□□□ -1.84
YJR028WYJR028W DSN1P40568 576 aa3.53□□□□□ -1.84
YJR028WYJR028W RPL10P41805 221 aaKnown RBP3.53□□□□□ -1.84
YJR028WYJR028W YPL113CQ02961 396 aa3.53□□□□□ -1.84
YJR028WYJR028W CSM4Q08955 156 aa3.53□□□□□ -1.84
YJR028WYJR028W PER33Q12144 273 aa3.53□□□□□ -1.84
YJR028WYJR028W CFT1Q06632 1357 aaKnown RBP3.52□□□□□ -1.85
YJR028WYJR028W SOD1P00445 154 aaKnown RBP3.52□□□□□ -1.85
YJR028WYJR028W YCR016WP25617 290 aaKnown RBP3.52□□□□□ -1.85
YJR028WYJR028W EHD3P28817 500 aa3.52□□□□□ -1.85
YJR028WYJR028W QRI5P32344 111 aa3.52□□□□□ -1.85
YJR028WYJR028W ECM34P38728 170 aa3.52□□□□□ -1.85
YJR028WYJR028W BFR1P38934 470 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
YJR028WYJR028W SMB1P40018 196 aaKnown RBP3.52□□□□□ -1.85
YJR028WYJR028W YJR012CP47087 207 aa3.52□□□□□ -1.85
YJR028WYJR028W UTP15Q04305 513 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms