RNA–Protein interactions for RNA: YIL139C

REV7, Transcript of Accessory subunit of DNA polymerase zeta, yeast

Gene REV7, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REV7	YIL139C	MYO5	Q04439	1219 aa	Known RBP	4.93	□□□□□ -1.62
REV7	YIL139C	YAL064W-B	O13512	126 aa		4.92	□□□□□ -1.62
REV7	YIL139C	JIP3	O13555	125 aa		4.92	□□□□□ -1.62
REV7	YIL139C	RPS3	P05750	240 aa	Known RBP	4.92	□□□□□ -1.62
REV7	YIL139C	ISY1	P21374	235 aa	Predicted RBP	4.92	□□□□□ -1.62
REV7	YIL139C	VPH2	P32341	215 aa		4.92	□□□□□ -1.62
REV7	YIL139C	HIT1	P46973	164 aa		4.92	□□□□□ -1.62
REV7	YIL139C	RNY1	Q02933	434 aa	Known RBP	4.92	□□□□□ -1.62
REV7	YIL139C	LIP2	Q06005	328 aa		4.92	□□□□□ -1.62
REV7	YIL139C	MMT2	Q08970	484 aa		4.92	□□□□□ -1.62
REV7	YIL139C	YOR114W	Q12219	294 aa		4.92	□□□□□ -1.62
REV7	YIL139C	HRT3	Q12347	344 aa		4.92	□□□□□ -1.62
REV7	YIL139C	SAC3	P46674	1301 aa		4.92	□□□□□ -1.62
REV7	YIL139C	RPS5	P26783	225 aa	Known RBP	4.91	□□□□□ -1.62
REV7	YIL139C	PPA2	P28239	310 aa		4.91	□□□□□ -1.62
REV7	YIL139C	ALK2	P32789	676 aa	Predicted RBP	4.91	□□□□□ -1.62
REV7	YIL139C	LDB7	P38210	180 aa		4.91	□□□□□ -1.62
REV7	YIL139C	WSC4	P38739	605 aa		4.91	□□□□□ -1.62
REV7	YIL139C	DSN1	P40568	576 aa		4.91	□□□□□ -1.62
REV7	YIL139C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
REV7	YIL139C	YNL040W	P53960	456 aa	Predicted RBP	4.91	□□□□□ -1.62
REV7	YIL139C	FOL3	Q12676	427 aa	Predicted RBP	4.91	□□□□□ -1.62
REV7	YIL139C	NCB2	Q92317	146 aa		4.91	□□□□□ -1.62
REV7	YIL139C	PET494	P07390	489 aa	Predicted RBP	4.9	□□□□□ -1.63
REV7	YIL139C	ASP3-2	P0CX77	362 aa		4.9	□□□□□ -1.63
REV7	YIL139C	ASP3-3	P0CX78	362 aa		4.9	□□□□□ -1.63
REV7	YIL139C	ASP3-4	P0CX79	362 aa		4.9	□□□□□ -1.63
REV7	YIL139C	ASP3-1	P0CZ17	362 aa		4.9	□□□□□ -1.63
REV7	YIL139C	TIP20	P33891	701 aa		4.9	□□□□□ -1.63
REV7	YIL139C	RFT1	P38206	574 aa	Predicted RBP	4.9	□□□□□ -1.63
REV7	YIL139C	THO1	P40040	218 aa	Known RBP	4.9	□□□□□ -1.63
REV7	YIL139C	MEP2	P41948	499 aa		4.9	□□□□□ -1.63
REV7	YIL139C	MAL13	P53338	473 aa		4.9	□□□□□ -1.63
REV7	YIL139C	YDR115W	Q04598	105 aa		4.9	□□□□□ -1.63
REV7	YIL139C	SPO77	Q06134	477 aa		4.9	□□□□□ -1.63
REV7	YIL139C	MHR1	Q06630	226 aa		4.9	□□□□□ -1.63
REV7	YIL139C	MIM1	Q08176	113 aa		4.9	□□□□□ -1.63
REV7	YIL139C	SNF8	Q12483	233 aa		4.9	□□□□□ -1.63
REV7	YIL139C	RPO26	P20435	155 aa		4.89	□□□□□ -1.63
REV7	YIL139C	CDC13	P32797	924 aa	Known RBP	4.89	□□□□□ -1.63
REV7	YIL139C	GPI18	P38211	433 aa		4.89	□□□□□ -1.63
REV7	YIL139C	GGC1	P38988	300 aa		4.89	□□□□□ -1.63
REV7	YIL139C	YRB1	P41920	201 aa	Known RBP	4.89	□□□□□ -1.63
REV7	YIL139C	LIF1	P53150	421 aa		4.89	□□□□□ -1.63
REV7	YIL139C	PEX31	P53203	462 aa		4.89	□□□□□ -1.63
REV7	YIL139C	VPS60	Q03390	229 aa		4.89	□□□□□ -1.63
REV7	YIL139C	SEC13	Q04491	297 aa	Known RBP	4.89	□□□□□ -1.63
REV7	YIL139C	YOR292C	Q08743	309 aa		4.89	□□□□□ -1.63
REV7	YIL139C	STH1	P32597	1359 aa		4.89	□□□□□ -1.63
REV7	YIL139C	RPP0	P05317	312 aa	Known RBP	4.88	□□□□□ -1.63
REV7	YIL139C	NHP6B	P11633	99 aa	Known RBP	4.88	□□□□□ -1.63
REV7	YIL139C	PBN1	P25580	416 aa		4.88	□□□□□ -1.63
REV7	YIL139C	GPX1	P36014	167 aa		4.88	□□□□□ -1.63
REV7	YIL139C	ALD5	P40047	520 aa	Known RBP	4.88	□□□□□ -1.63
REV7	YIL139C	RPC17	P47076	161 aa		4.88	□□□□□ -1.63
REV7	YIL139C	HOC1	P47124	396 aa		4.88	□□□□□ -1.63
REV7	YIL139C	CDC14	Q00684	551 aa		4.88	□□□□□ -1.63
REV7	YIL139C	RMI1	Q02685	241 aa		4.88	□□□□□ -1.63
REV7	YIL139C	MRX11	Q03079	207 aa		4.88	□□□□□ -1.63
REV7	YIL139C	BNA7	Q04066	261 aa		4.88	□□□□□ -1.63
REV7	YIL139C	YTH1	Q06102	208 aa	Predicted RBP	4.88	□□□□□ -1.63
REV7	YIL139C	SRO7	Q12038	1033 aa		4.88	□□□□□ -1.63
REV7	YIL139C	MATALPHA1	P0CY06	175 aa		4.87	□□□□□ -1.63
REV7	YIL139C	HMLALPHA1	P0CY07	175 aa		4.87	□□□□□ -1.63
REV7	YIL139C	MRPL25	P23369	157 aa		4.87	□□□□□ -1.63
REV7	YIL139C	SPS19	P32573	292 aa	Known RBP	4.87	□□□□□ -1.63
REV7	YIL139C	MBA1	P38300	278 aa		4.87	□□□□□ -1.63
REV7	YIL139C	SIP3	P38717	1229 aa		4.87	□□□□□ -1.63
REV7	YIL139C	MIC19	P43594	170 aa		4.87	□□□□□ -1.63
REV7	YIL139C	YPS5	P53057	165 aa		4.87	□□□□□ -1.63
REV7	YIL139C	SDT1	P53078	280 aa		4.87	□□□□□ -1.63
REV7	YIL139C	PAL1	Q05518	499 aa	Known RBP	4.87	□□□□□ -1.63
REV7	YIL139C	HOM6	P31116	359 aa	Known RBP	4.86	□□□□□ -1.63
REV7	YIL139C	VMA6	P32366	345 aa	Known RBP	4.86	□□□□□ -1.63
REV7	YIL139C	SWD3	P38123	315 aa		4.86	□□□□□ -1.63
REV7	YIL139C	MRP21	P38175	177 aa		4.86	□□□□□ -1.63
REV7	YIL139C	YFL064C	P43540	174 aa		4.86	□□□□□ -1.63
REV7	YIL139C	USE1	P53146	245 aa		4.86	□□□□□ -1.63
REV7	YIL139C	RPL21A	Q02753	160 aa	Known RBP	4.86	□□□□□ -1.63
REV7	YIL139C	MRPS17	Q03246	237 aa	Predicted RBP	4.86	□□□□□ -1.63
REV7	YIL139C	VHS1	Q03785	461 aa		4.86	□□□□□ -1.63
REV7	YIL139C	ATG38	Q05789	226 aa	Known RBP	4.86	□□□□□ -1.63
REV7	YIL139C	SNU23	Q12368	194 aa	Predicted RBP	4.86	□□□□□ -1.63
REV7	YIL139C	TRM10	Q12400	293 aa		4.86	□□□□□ -1.63
REV7	YIL139C	COQ1	P18900	473 aa		4.85	□□□□□ -1.63
REV7	YIL139C	QRI5	P32344	111 aa		4.85	□□□□□ -1.63
REV7	YIL139C	MRPL3	P36516	390 aa		4.85	□□□□□ -1.63
REV7	YIL139C	FZO1	P38297	855 aa		4.85	□□□□□ -1.63
REV7	YIL139C	SMB1	P40018	196 aa	Known RBP	4.85	□□□□□ -1.63
REV7	YIL139C	KRE29	P40026	464 aa		4.85	□□□□□ -1.63
REV7	YIL139C	COX15	P40086	486 aa		4.85	□□□□□ -1.63
REV7	YIL139C	GLG2	P47011	380 aa		4.85	□□□□□ -1.63
REV7	YIL139C	HSH155	P49955	971 aa	Known RBP	4.85	□□□□□ -1.63
REV7	YIL139C	GIM3	P53900	129 aa		4.85	□□□□□ -1.63
REV7	YIL139C	SWS2	P53937	143 aa		4.85	□□□□□ -1.63
REV7	YIL139C	ASI3	P53983	676 aa		4.85	□□□□□ -1.63
REV7	YIL139C	EBS1	Q03466	884 aa	Known RBP	4.85	□□□□□ -1.63
REV7	YIL139C	YOR376W	Q08900	122 aa		4.85	□□□□□ -1.63
REV7	YIL139C	YDR018C	Q12185	396 aa		4.85	□□□□□ -1.63
REV7	YIL139C	CHD1	P32657	1468 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms