RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YHL049CP38722 271 aa5.45□□□□□ -1.54
SKN1YGR143W CKB2P38930 258 aa5.45□□□□□ -1.54
SKN1YGR143W YEL075CP39972 122 aa5.45□□□□□ -1.54
SKN1YGR143W YER188WP40103 239 aa5.45□□□□□ -1.54
SKN1YGR143W YER189WP40104 122 aa5.45□□□□□ -1.54
SKN1YGR143W SLZ1P40167 298 aa5.45□□□□□ -1.54
SKN1YGR143W FMC1P40491 155 aa5.45□□□□□ -1.54
SKN1YGR143W GLR1P41921 483 aaKnown RBP5.45□□□□□ -1.54
SKN1YGR143W YFL064CP43540 174 aa5.45□□□□□ -1.54
SKN1YGR143W PHB2P50085 310 aa5.45□□□□□ -1.54
SKN1YGR143W MDM34P53083 459 aa5.45□□□□□ -1.54
SKN1YGR143W MKC7P53379 596 aa5.45□□□□□ -1.54
SKN1YGR143W BOR1P53838 576 aa5.45□□□□□ -1.54
SKN1YGR143W ARG5,6Q01217 863 aa5.45□□□□□ -1.54
SKN1YGR143W MRPS16Q02608 121 aa5.45□□□□□ -1.54
SKN1YGR143W MAK3Q03503 176 aa5.45□□□□□ -1.54
SKN1YGR143W DPP1Q05521 289 aa5.45□□□□□ -1.54
SKN1YGR143W RNH202Q05635 350 aa5.45□□□□□ -1.54
SKN1YGR143W VMA9Q3E7B6 73 aa5.45□□□□□ -1.54
SKN1YGR143W ADH3P07246 375 aaKnown RBP5.44□□□□□ -1.54
SKN1YGR143W PHO2P07269 559 aa5.44□□□□□ -1.54
SKN1YGR143W HAP3P13434 144 aa5.44□□□□□ -1.54
SKN1YGR143W PHO80P20052 293 aa5.44□□□□□ -1.54
SKN1YGR143W CKS1P20486 150 aaKnown RBP5.44□□□□□ -1.54
SKN1YGR143W EHD3P28817 500 aa5.44□□□□□ -1.54
SKN1YGR143W SHE2P36068 246 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SKN1YGR143W IRS4P36115 615 aaKnown RBP5.44□□□□□ -1.54
SKN1YGR143W DER1P38307 211 aa5.44□□□□□ -1.54
SKN1YGR143W ALP1P38971 573 aa5.44□□□□□ -1.54
SKN1YGR143W YIL054WP40524 105 aa5.44□□□□□ -1.54
SKN1YGR143W SPG5P42933 373 aa5.44□□□□□ -1.54
SKN1YGR143W CSN12P47130 423 aa5.44□□□□□ -1.54
SKN1YGR143W YGL101WP53144 215 aa5.44□□□□□ -1.54
SKN1YGR143W YNL140CP53910 189 aa5.44□□□□□ -1.54
SKN1YGR143W YMR210WQ03649 449 aa5.44□□□□□ -1.54
SKN1YGR143W CUE4Q04201 117 aaPredicted RBP5.44□□□□□ -1.54
SKN1YGR143W RIF2Q06208 395 aa5.44□□□□□ -1.54
SKN1YGR143W CUR1Q06469 252 aa5.44□□□□□ -1.54
SKN1YGR143W SHS1Q07657 551 aa5.44□□□□□ -1.54
SKN1YGR143W TEN1Q07921 160 aa5.44□□□□□ -1.54
SKN1YGR143W GCR1P07261 785 aa5.43□□□□□ -1.54
SKN1YGR143W RPL27AP0C2H6 136 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W RPL27BP0C2H7 136 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W RPL1AP0CX43 217 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W RPL1BP0CX44 217 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W MDH3P32419 343 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SKN1YGR143W YBR096WP38256 230 aa5.43□□□□□ -1.54
SKN1YGR143W YHR097CP38809 366 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W MDM31P38880 579 aa5.43□□□□□ -1.54
SKN1YGR143W CHL4P38907 458 aa5.43□□□□□ -1.54
SKN1YGR143W SNU13P39990 126 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W NPP2P39997 493 aa5.43□□□□□ -1.54
SKN1YGR143W SNM1P40993 198 aa5.43□□□□□ -1.54
SKN1YGR143W YCH1P42937 148 aa5.43□□□□□ -1.54
SKN1YGR143W ZAP1P47043 880 aa5.43□□□□□ -1.54
SKN1YGR143W SBH2P52871 88 aa5.43□□□□□ -1.54
SKN1YGR143W BIO4P53630 237 aa5.43□□□□□ -1.54
SKN1YGR143W TPO3Q06451 622 aa5.43□□□□□ -1.54
SKN1YGR143W AIM39Q08223 395 aa5.43□□□□□ -1.54
SKN1YGR143W TMS1Q12116 473 aa5.43□□□□□ -1.54
SKN1YGR143W YPL245WQ12179 454 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W KCS1Q12494 1050 aa5.43□□□□□ -1.54
SKN1YGR143W YCR075W-AQ3E830 75 aa5.43□□□□□ -1.54
SKN1YGR143W STE4P18851 423 aa5.43□□□□□ -1.54
SKN1YGR143W PRE9P23638 258 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W YCP4P25349 247 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W SKG6P32900 734 aaPredicted RBP5.43□□□□□ -1.54
SKN1YGR143W OMA1P36163 345 aa5.43□□□□□ -1.54
SKN1YGR143W YAR028WP39548 234 aa5.43□□□□□ -1.54
SKN1YGR143W VNX1P42839 908 aa5.43□□□□□ -1.54
SKN1YGR143W AAD14P42884 376 aa5.43□□□□□ -1.54
SKN1YGR143W DPB11P47027 764 aaPredicted RBP5.43□□□□□ -1.54
SKN1YGR143W PHO23P50947 330 aa5.43□□□□□ -1.54
SKN1YGR143W DIA3P52290 468 aa5.43□□□□□ -1.54
SKN1YGR143W VPS73P53142 486 aaKnown RBP5.43□□□□□ -1.54
SKN1YGR143W SMX3P54999 86 aaPredicted RBP5.43□□□□□ -1.54
SKN1YGR143W MRPL1Q04599 285 aa5.43□□□□□ -1.54
SKN1YGR143W AAD15Q08361 143 aa5.43□□□□□ -1.54
SKN1YGR143W YIR021W-AQ3E739 70 aa5.43□□□□□ -1.54
SKN1YGR143W QCR7P00128 127 aa5.42□□□□□ -1.54
SKN1YGR143W SUC2P00724 532 aa5.42□□□□□ -1.54
SKN1YGR143W CDC4P07834 779 aa5.42□□□□□ -1.54
SKN1YGR143W ERR1P0CX10 437 aa5.42□□□□□ -1.54
SKN1YGR143W ERR2P0CX11 437 aa5.42□□□□□ -1.54
SKN1YGR143W ACB1P31787 87 aa5.42□□□□□ -1.54
SKN1YGR143W STE14P32584 239 aa5.42□□□□□ -1.54
SKN1YGR143W PEX2P32800 271 aa5.42□□□□□ -1.54
SKN1YGR143W SPC29P33419 253 aa5.42□□□□□ -1.54
SKN1YGR143W GCS1P35197 352 aa5.42□□□□□ -1.54
SKN1YGR143W DAD2P36162 133 aa5.42□□□□□ -1.54
SKN1YGR143W MGE1P38523 228 aa5.42□□□□□ -1.54
SKN1YGR143W CHS7P38843 316 aa5.42□□□□□ -1.54
SKN1YGR143W IPT1P38954 527 aa5.42□□□□□ -1.54
SKN1YGR143W OYE3P41816 400 aaPredicted RBP5.42□□□□□ -1.54
SKN1YGR143W GAT1P43574 510 aa5.42□□□□□ -1.54
SKN1YGR143W TOS3P43637 560 aa5.42□□□□□ -1.54
SKN1YGR143W FAA4P47912 694 aaKnown RBP5.42□□□□□ -1.54
SKN1YGR143W SKP1P52286 194 aa5.42□□□□□ -1.54
SKN1YGR143W SKO1Q02100 647 aa5.42□□□□□ -1.54
SKN1YGR143W CSI2Q08054 341 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms