RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YDR209CQ03480 137 aa1.68□□□□□ -2.14
SMD1YGR074W YML018CQ03730 393 aa1.68□□□□□ -2.14
SMD1YGR074W YMR244WQ04018 355 aa1.68□□□□□ -2.14
SMD1YGR074W SEC13Q04491 297 aaKnown RBP1.68□□□□□ -2.14
SMD1YGR074W SFH1Q06168 426 aa1.68□□□□□ -2.14
SMD1YGR074W TAZ1Q06510 381 aa1.68□□□□□ -2.14
SMD1YGR074W MIM1Q08176 113 aa1.68□□□□□ -2.14
SMD1YGR074W YPL150WQ12152 901 aa1.68□□□□□ -2.14
SMD1YGR074W RAD3P06839 778 aa1.67□□□□□ -2.14
SMD1YGR074W CAM1P29547 415 aaKnown RBP1.67□□□□□ -2.14
SMD1YGR074W AEP1P32493 518 aa1.67□□□□□ -2.14
SMD1YGR074W MRPL3P36516 390 aa1.67□□□□□ -2.14
SMD1YGR074W ASP1P38986 381 aaPredicted RBP1.67□□□□□ -2.14
SMD1YGR074W SEN34P39707 275 aa1.67□□□□□ -2.14
SMD1YGR074W FRT2P39734 528 aa1.67□□□□□ -2.14
SMD1YGR074W VAB2P40003 282 aa1.67□□□□□ -2.14
SMD1YGR074W DDI1P40087 428 aa1.67□□□□□ -2.14
SMD1YGR074W COA1P40452 197 aa1.67□□□□□ -2.14
SMD1YGR074W YIL012WP40551 113 aa1.67□□□□□ -2.14
SMD1YGR074W RPL10P41805 221 aaKnown RBP1.67□□□□□ -2.14
SMD1YGR074W BNA6P43619 295 aa1.67□□□□□ -2.14
SMD1YGR074W YJR012CP47087 207 aa1.67□□□□□ -2.14
SMD1YGR074W NUP84P52891 726 aa1.67□□□□□ -2.14
SMD1YGR074W LIF1P53150 421 aa1.67□□□□□ -2.14
SMD1YGR074W PEX31P53203 462 aa1.67□□□□□ -2.14
SMD1YGR074W OST6Q03723 332 aa1.67□□□□□ -2.14
SMD1YGR074W TSA2Q04120 196 aa1.67□□□□□ -2.14
SMD1YGR074W COX20Q04935 205 aa1.67□□□□□ -2.14
SMD1YGR074W SEC10Q06245 871 aa1.67□□□□□ -2.14
SMD1YGR074W YDR018CQ12185 396 aa1.67□□□□□ -2.14
SMD1YGR074W TRM10Q12400 293 aa1.67□□□□□ -2.14
SMD1YGR074W YAL064W-BO13512 126 aa1.66□□□□□ -2.14
SMD1YGR074W FUS3P16892 353 aaKnown RBP1.66□□□□□ -2.14
SMD1YGR074W PEX3P28795 441 aa1.66□□□□□ -2.14
SMD1YGR074W VPH2P32341 215 aa1.66□□□□□ -2.14
SMD1YGR074W KRE6P32486 720 aa1.66□□□□□ -2.14
SMD1YGR074W SRB4P32569 687 aa1.66□□□□□ -2.14
SMD1YGR074W GPX1P36014 167 aa1.66□□□□□ -2.14
SMD1YGR074W DBP7P36120 742 aaKnown RBP1.66□□□□□ -2.14
SMD1YGR074W FRM2P37261 193 aa1.66□□□□□ -2.14
SMD1YGR074W PHO89P38361 574 aa1.66□□□□□ -2.14
SMD1YGR074W PRM9P39551 298 aa1.66□□□□□ -2.14
SMD1YGR074W SCC4P40090 624 aa1.66□□□□□ -2.14
SMD1YGR074W YIR035CP40579 254 aa1.66□□□□□ -2.14
SMD1YGR074W YGR018CP53211 109 aa1.66□□□□□ -2.14
SMD1YGR074W YGR067CP53243 804 aa1.66□□□□□ -2.14
SMD1YGR074W LSB1P53281 241 aa1.66□□□□□ -2.14
SMD1YGR074W MRS2Q01926 470 aa1.66□□□□□ -2.14
SMD1YGR074W TRM44Q02648 567 aaKnown RBP1.66□□□□□ -2.14
SMD1YGR074W RNY1Q02933 434 aaKnown RBP1.66□□□□□ -2.14
SMD1YGR074W VBA1Q04301 562 aa1.66□□□□□ -2.14
SMD1YGR074W CTS2Q06350 511 aa1.66□□□□□ -2.14
SMD1YGR074W TIR4Q12218 487 aaPredicted RBP1.66□□□□□ -2.14
SMD1YGR074W DFM1Q12743 341 aaKnown RBP1.66□□□□□ -2.14
SMD1YGR074W AUS1Q08409 1394 aa1.66□□□□□ -2.14
SMD1YGR074W COX2P00410 251 aa1.65□□□□□ -2.15
SMD1YGR074W RPS3P05750 240 aaKnown RBP1.65□□□□□ -2.15
SMD1YGR074W MSF1P08425 469 aa1.65□□□□□ -2.15
SMD1YGR074W POL30P15873 258 aaKnown RBP1.65□□□□□ -2.15
SMD1YGR074W OSM1P21375 501 aaKnown RBP1.65□□□□□ -2.15
SMD1YGR074W VPS3P23643 1011 aa1.65□□□□□ -2.15
SMD1YGR074W RRT12P25381 491 aa1.65□□□□□ -2.15
SMD1YGR074W POF1P25576 258 aa1.65□□□□□ -2.15
SMD1YGR074W ALK2P32789 676 aaPredicted RBP1.65□□□□□ -2.15
SMD1YGR074W TCD1P38756 429 aa1.65□□□□□ -2.15
SMD1YGR074W YHR045WP38775 560 aa1.65□□□□□ -2.15
SMD1YGR074W BDH1P39714 382 aa1.65□□□□□ -2.15
SMD1YGR074W FMC1P40491 155 aa1.65□□□□□ -2.15
SMD1YGR074W PGU1P47180 361 aa1.65□□□□□ -2.15
SMD1YGR074W TPN1P53099 579 aa1.65□□□□□ -2.15
SMD1YGR074W RSM27P53305 110 aa1.65□□□□□ -2.15
SMD1YGR074W PET117Q02771 107 aa1.65□□□□□ -2.15
SMD1YGR074W YPL113CQ02961 396 aa1.65□□□□□ -2.15
SMD1YGR074W VPS60Q03390 229 aa1.65□□□□□ -2.15
SMD1YGR074W PEX10Q05568 337 aa1.65□□□□□ -2.15
SMD1YGR074W NNT1Q05874 261 aa1.65□□□□□ -2.15
SMD1YGR074W BSC6Q08280 497 aa1.65□□□□□ -2.15
SMD1YGR074W YDL211CQ12121 372 aa1.65□□□□□ -2.15
SMD1YGR074W YOR114WQ12219 294 aa1.65□□□□□ -2.15
SMD1YGR074W RUD3Q12234 484 aaKnown RBP1.65□□□□□ -2.15
SMD1YGR074W YOS9Q99220 542 aa1.65□□□□□ -2.15
SMD1YGR074W STH1P32597 1359 aa1.64□□□□□ -2.15
SMD1YGR074W PET494P07390 489 aaPredicted RBP1.64□□□□□ -2.15
SMD1YGR074W CUP2P15315 225 aa1.64□□□□□ -2.15
SMD1YGR074W CPT1P17898 393 aa1.64□□□□□ -2.15
SMD1YGR074W CAT2P32796 670 aaKnown RBP1.64□□□□□ -2.15
SMD1YGR074W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SMD1YGR074W YBR062CP38239 180 aa1.64□□□□□ -2.15
SMD1YGR074W MBA1P38300 278 aa1.64□□□□□ -2.15
SMD1YGR074W BIG1P38813 335 aa1.64□□□□□ -2.15
SMD1YGR074W NPT1P39683 429 aaKnown RBP1.64□□□□□ -2.15
SMD1YGR074W AVT6P40074 448 aa1.64□□□□□ -2.15
SMD1YGR074W RRG9P40156 214 aa1.64□□□□□ -2.15
SMD1YGR074W YAR1P46683 200 aa1.64□□□□□ -2.15
SMD1YGR074W RPE1P46969 238 aa1.64□□□□□ -2.15
SMD1YGR074W IBA57P47158 497 aa1.64□□□□□ -2.15
SMD1YGR074W SLX9P53251 210 aaPredicted RBP1.64□□□□□ -2.15
SMD1YGR074W MNT4P53745 580 aa1.64□□□□□ -2.15
SMD1YGR074W YNL134CP53912 376 aaKnown RBP1.64□□□□□ -2.15
SMD1YGR074W ECM19Q06011 112 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms