RNA–Protein interactions for RNA: YER013W

PRP22, Transcript of DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase, yeast

Gene PRP22, Length 3,438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP22	YER013W	ASK10	P48361	1146 aa		3.2	□□□□□ -1.9
PRP22	YER013W	FMP41	P53889	259 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	PRP38	Q00723	242 aa	Predicted RBP	3.2	□□□□□ -1.9
PRP22	YER013W	EST3	Q03096	181 aa		3.2	□□□□□ -1.9
PRP22	YER013W	GSF2	Q04697	403 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	BSC6	Q08280	497 aa		3.2	□□□□□ -1.9
PRP22	YER013W	CSM4	Q08955	156 aa		3.2	□□□□□ -1.9
PRP22	YER013W	AHA1	Q12449	350 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	SGA1	P08019	549 aa		3.2	□□□□□ -1.9
PRP22	YER013W	PUT1	P09368	476 aa		3.2	□□□□□ -1.9
PRP22	YER013W	AIM17	P23180	465 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	HMX1	P32339	317 aa		3.2	□□□□□ -1.9
PRP22	YER013W	YUH1	P35127	236 aa		3.2	□□□□□ -1.9
PRP22	YER013W	YBR220C	P38318	560 aa		3.2	□□□□□ -1.9
PRP22	YER013W	RRP3	P38712	501 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	YHR035W	P38769	630 aa		3.2	□□□□□ -1.9
PRP22	YER013W	PTH1	P38876	190 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	BDH1	P39714	382 aa		3.2	□□□□□ -1.9
PRP22	YER013W	HPA3	P39979	161 aa		3.2	□□□□□ -1.9
PRP22	YER013W	ARG2	P40360	574 aa		3.2	□□□□□ -1.9
PRP22	YER013W	MND2	P40577	368 aa		3.2	□□□□□ -1.9
PRP22	YER013W	GWT1	P47026	490 aa		3.2	□□□□□ -1.9
PRP22	YER013W	NRK1	P53915	240 aa		3.2	□□□□□ -1.9
PRP22	YER013W	GPI15	P53961	229 aa		3.2	□□□□□ -1.9
PRP22	YER013W	ACT1	P60010	375 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	CDC14	Q00684	551 aa		3.2	□□□□□ -1.9
PRP22	YER013W	EKI1	Q03764	534 aa		3.2	□□□□□ -1.9
PRP22	YER013W	YMR315W	Q04869	349 aa	Known RBP	3.2	□□□□□ -1.9
PRP22	YER013W	YLR413W	Q06689	675 aa		3.2	□□□□□ -1.9
PRP22	YER013W	SUL2	Q12325	893 aa		3.2	□□□□□ -1.9
PRP22	YER013W	PET20	Q99373	253 aa		3.2	□□□□□ -1.9
PRP22	YER013W	MNE1	P24720	663 aa		3.19	□□□□□ -1.9
PRP22	YER013W	BUD5	P25300	642 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	PUT3	P25502	979 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	IMG2	P25642	146 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	EHD3	P28817	500 aa		3.19	□□□□□ -1.9
PRP22	YER013W	LRO1	P40345	661 aa		3.19	□□□□□ -1.9
PRP22	YER013W	GDS1	P41913	522 aa		3.19	□□□□□ -1.9
PRP22	YER013W	OST3	P48439	350 aa		3.19	□□□□□ -1.9
PRP22	YER013W	AAH1	P53909	347 aa		3.19	□□□□□ -1.9
PRP22	YER013W	OAZ1	Q02803	292 aa		3.19	□□□□□ -1.9
PRP22	YER013W	GIP3	Q03016	1276 aa		3.19	□□□□□ -1.9
PRP22	YER013W	MSC1	Q03104	513 aa		3.19	□□□□□ -1.9
PRP22	YER013W	PEX12	Q04370	399 aa		3.19	□□□□□ -1.9
PRP22	YER013W	CDD1	Q06549	142 aa		3.19	□□□□□ -1.9
PRP22	YER013W	SUS1	Q6WNK7	96 aa		3.19	□□□□□ -1.9
PRP22	YER013W	MES1	P00958	751 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	RPP2A	P05319	106 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	EPT1	P22140	391 aa		3.19	□□□□□ -1.9
PRP22	YER013W	RML2	P32611	393 aa		3.19	□□□□□ -1.9
PRP22	YER013W	RRN10	P38204	145 aa		3.19	□□□□□ -1.9
PRP22	YER013W	POG1	P40473	351 aa		3.19	□□□□□ -1.9
PRP22	YER013W	YIR007W	P40566	764 aa		3.19	□□□□□ -1.9
PRP22	YER013W	PAM16	P42949	149 aa		3.19	□□□□□ -1.9
PRP22	YER013W	EXG2	P52911	562 aa		3.19	□□□□□ -1.9
PRP22	YER013W	FLC3	P53121	802 aa		3.19	□□□□□ -1.9
PRP22	YER013W	PNC1	P53184	216 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	YMR034C	Q05131	434 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	MEX67	Q99257	599 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	ADE4	P04046	510 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	CDC7	P06243	507 aa		3.19	□□□□□ -1.9
PRP22	YER013W	CDC33	P07260	213 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	SAC7	P17121	654 aa		3.19	□□□□□ -1.9
PRP22	YER013W	MEK1	P24719	497 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	BUB2	P26448	306 aa	Predicted RBP	3.19	□□□□□ -1.9
PRP22	YER013W	TMA19	P35691	167 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	MTC4	P38335	694 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	AFG3	P39925	761 aa		3.19	□□□□□ -1.9
PRP22	YER013W	HEM14	P40012	539 aa		3.19	□□□□□ -1.9
PRP22	YER013W	IRC7	P43623	340 aa		3.19	□□□□□ -1.9
PRP22	YER013W	YJL163C	P46996	555 aa		3.19	□□□□□ -1.9
PRP22	YER013W	AVT4	P50944	713 aa		3.19	□□□□□ -1.9
PRP22	YER013W	PRM8	P53174	237 aa		3.19	□□□□□ -1.9
PRP22	YER013W	DUS1	P53759	423 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	RCR2	Q03446	210 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	CGI121	Q03705	181 aa	Known RBP	3.19	□□□□□ -1.9
PRP22	YER013W	EMI1	Q04406	187 aa		3.19	□□□□□ -1.9
PRP22	YER013W	YML053C	Q04978	212 aa		3.19	□□□□□ -1.9
PRP22	YER013W	HRD3	Q05787	833 aa		3.19	□□□□□ -1.9
PRP22	YER013W	ATG41	Q12048	136 aa		3.19	□□□□□ -1.9
PRP22	YER013W	YPR027C	Q12079	277 aa		3.19	□□□□□ -1.9
PRP22	YER013W	SIA1	Q12212	622 aa		3.19	□□□□□ -1.9
PRP22	YER013W	YFL068W	P0CX99	160 aa		3.18	□□□□□ -1.9
PRP22	YER013W	YLL066W-A	P0CY00	160 aa		3.18	□□□□□ -1.9
PRP22	YER013W	YLL067W-A	P0CY01	160 aa		3.18	□□□□□ -1.9
PRP22	YER013W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
PRP22	YER013W	SAM2	P19358	384 aa	Known RBP	3.18	□□□□□ -1.9
PRP22	YER013W	YCK2	P23292	546 aa	Known RBP	3.18	□□□□□ -1.9
PRP22	YER013W	PRE8	P23639	250 aa		3.18	□□□□□ -1.9
PRP22	YER013W	YCR087C-A	P37263	153 aa		3.18	□□□□□ -1.9
PRP22	YER013W	FIG1	P38224	298 aa		3.18	□□□□□ -1.9
PRP22	YER013W	CHS7	P38843	316 aa		3.18	□□□□□ -1.9
PRP22	YER013W	SKN7	P38889	622 aa		3.18	□□□□□ -1.9
PRP22	YER013W	MET30	P39014	640 aa		3.18	□□□□□ -1.9
PRP22	YER013W	EAF5	P39995	279 aa		3.18	□□□□□ -1.9
PRP22	YER013W	SMK1	P41808	388 aa		3.18	□□□□□ -1.9
PRP22	YER013W	RPA34	P47006	233 aa	Predicted RBP	3.18	□□□□□ -1.9
PRP22	YER013W	BIT61	P47041	543 aa		3.18	□□□□□ -1.9
PRP22	YER013W	SDT1	P53078	280 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 131.7 ms