RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W RPS1BP23248 255 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W PPH22P23595 377 aa2.22□□□□□ -2.05
SNX41YDR425W TAH1P25638 111 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W BEM1P29366 551 aa2.22□□□□□ -2.05
SNX41YDR425W ATP11P32453 318 aa2.22□□□□□ -2.05
SNX41YDR425W CDC13P32797 924 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W COT1P32798 439 aa2.22□□□□□ -2.05
SNX41YDR425W RPS1AP33442 255 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W WBP1P33767 430 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W CPR5P35176 225 aa2.22□□□□□ -2.05
SNX41YDR425W RIB1P38066 345 aa2.22□□□□□ -2.05
SNX41YDR425W YBL028CP38202 106 aa2.22□□□□□ -2.05
SNX41YDR425W NSG1P38837 291 aa2.22□□□□□ -2.05
SNX41YDR425W AIM18P38884 321 aa2.22□□□□□ -2.05
SNX41YDR425W SEN34P39707 275 aa2.22□□□□□ -2.05
SNX41YDR425W GDI1P39958 451 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W HPA3P39979 161 aa2.22□□□□□ -2.05
SNX41YDR425W SEC28P40509 296 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W CAK1P43568 368 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W AIM24P47127 394 aa2.22□□□□□ -2.05
SNX41YDR425W MRX6P48564 524 aa2.22□□□□□ -2.05
SNX41YDR425W PMT5P52867 743 aa2.22□□□□□ -2.05
SNX41YDR425W MPC1P53157 130 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W YGR067CP53243 804 aa2.22□□□□□ -2.05
SNX41YDR425W HHO1P53551 258 aa2.22□□□□□ -2.05
SNX41YDR425W HXT11P54862 567 aa2.22□□□□□ -2.05
SNX41YDR425W MEH1Q02205 184 aa2.22□□□□□ -2.05
SNX41YDR425W NHP10Q03435 203 aa2.22□□□□□ -2.05
SNX41YDR425W RIF2Q06208 395 aa2.22□□□□□ -2.05
SNX41YDR425W ASR1Q06834 288 aa2.22□□□□□ -2.05
SNX41YDR425W SCP1Q08873 200 aa2.22□□□□□ -2.05
SNX41YDR425W RLM1Q12224 676 aa2.22□□□□□ -2.05
SNX41YDR425W JLP1Q12358 412 aa2.22□□□□□ -2.05
SNX41YDR425W YDL199CQ12407 687 aa2.22□□□□□ -2.05
SNX41YDR425W CMC2Q3E7A4 109 aa2.22□□□□□ -2.05
SNX41YDR425W RPS18AP0CX55 146 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W RPS18BP0CX56 146 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W REV1P12689 985 aa2.22□□□□□ -2.05
SNX41YDR425W MDH1P17505 334 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SNX41YDR425W IDP1P21954 428 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W MNE1P24720 663 aa2.22□□□□□ -2.05
SNX41YDR425W YCR102CP25608 368 aa2.22□□□□□ -2.05
SNX41YDR425W ACB1P31787 87 aa2.22□□□□□ -2.05
SNX41YDR425W SRB6P32570 121 aa2.22□□□□□ -2.05
SNX41YDR425W CAT2P32796 670 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W PDC2P32896 925 aa2.22□□□□□ -2.05
SNX41YDR425W SPO23P33757 523 aa2.22□□□□□ -2.05
SNX41YDR425W SPT10P35208 640 aa2.22□□□□□ -2.05
SNX41YDR425W DED81P38707 554 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W ATM1P40416 690 aa2.22□□□□□ -2.05
SNX41YDR425W SGN1P40561 250 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SNX41YDR425W RPL10P41805 221 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W NSE4P43124 402 aa2.22□□□□□ -2.05
SNX41YDR425W GNA1P43577 159 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W ATG18P43601 500 aa2.22□□□□□ -2.05
SNX41YDR425W JHD2P47156 728 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W YJR141WP47172 347 aaPredicted RBP2.22□□□□□ -2.05
SNX41YDR425W PRP24P49960 444 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W NBP35P52920 328 aa2.22□□□□□ -2.05
SNX41YDR425W MKC7P53379 596 aa2.22□□□□□ -2.05
SNX41YDR425W RRN9P53437 365 aa2.22□□□□□ -2.05
SNX41YDR425W YNL146WP53906 100 aa2.22□□□□□ -2.05
SNX41YDR425W NUP116Q02630 1113 aa2.22□□□□□ -2.05
SNX41YDR425W EMI1Q04406 187 aa2.22□□□□□ -2.05
SNX41YDR425W RNH1Q04740 348 aa2.22□□□□□ -2.05
SNX41YDR425W SPO77Q06134 477 aa2.22□□□□□ -2.05
SNX41YDR425W SWC7Q06707 132 aa2.22□□□□□ -2.05
SNX41YDR425W YDL121CQ07541 149 aa2.22□□□□□ -2.05
SNX41YDR425W SHS1Q07657 551 aa2.22□□□□□ -2.05
SNX41YDR425W YOL019WQ08157 551 aa2.22□□□□□ -2.05
SNX41YDR425W YOL131WQ08270 108 aa2.22□□□□□ -2.05
SNX41YDR425W IES4Q08561 116 aa2.22□□□□□ -2.05
SNX41YDR425W UAF30Q08747 228 aa2.22□□□□□ -2.05
SNX41YDR425W YLR108CQ12259 485 aa2.22□□□□□ -2.05
SNX41YDR425W RKM5Q12367 367 aa2.22□□□□□ -2.05
SNX41YDR425W DCN1Q12395 269 aa2.22□□□□□ -2.05
SNX41YDR425W PCC1Q3E833 88 aa2.22□□□□□ -2.05
SNX41YDR425W RPC40P07703 335 aaKnown RBP2.21□□□□□ -2.06
SNX41YDR425W DFR1P07807 211 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SNX41YDR425W ASP3-2P0CX77 362 aa2.21□□□□□ -2.06
SNX41YDR425W ASP3-3P0CX78 362 aa2.21□□□□□ -2.06
SNX41YDR425W ASP3-4P0CX79 362 aa2.21□□□□□ -2.06
SNX41YDR425W ASP3-1P0CZ17 362 aa2.21□□□□□ -2.06
SNX41YDR425W RPL4AP10664 362 aaKnown RBP2.21□□□□□ -2.06
SNX41YDR425W MAG1P22134 296 aaKnown RBP2.21□□□□□ -2.06
SNX41YDR425W LDS1P31379 325 aa2.21□□□□□ -2.06
SNX41YDR425W COX13P32799 129 aa2.21□□□□□ -2.06
SNX41YDR425W SKT5P34226 696 aa2.21□□□□□ -2.06
SNX41YDR425W CAF4P36130 643 aa2.21□□□□□ -2.06
SNX41YDR425W MRPL37P36532 105 aa2.21□□□□□ -2.06
SNX41YDR425W MBB1P39534 108 aa2.21□□□□□ -2.06
SNX41YDR425W ISC1P40015 477 aaKnown RBP2.21□□□□□ -2.06
SNX41YDR425W SPO73P40031 143 aa2.21□□□□□ -2.06
SNX41YDR425W MPM1P40364 252 aa2.21□□□□□ -2.06
SNX41YDR425W YIR035CP40579 254 aa2.21□□□□□ -2.06
SNX41YDR425W ERG10P41338 398 aaKnown RBP2.21□□□□□ -2.06
SNX41YDR425W TAD2P47058 250 aa2.21□□□□□ -2.06
SNX41YDR425W SNN1P48232 102 aa2.21□□□□□ -2.06
SNX41YDR425W RPL4BP49626 362 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms