RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W FRE8Q12209 686 aa2.04□□□□□ -2.08
SSF2YDR312W RAX2Q12465 1220 aa2.04□□□□□ -2.08
SSF2YDR312W TRA1P38811 3744 aa2.04□□□□□ -2.08
SSF2YDR312W PDR18P53756 1333 aa2.03□□□□□ -2.08
SSF2YDR312W IPP1P00817 287 aaKnown RBP2.03□□□□□ -2.08
SSF2YDR312W RAD1P06777 1100 aa2.03□□□□□ -2.08
SSF2YDR312W MSF1P08425 469 aa2.03□□□□□ -2.08
SSF2YDR312W UTR1P21373 530 aa2.03□□□□□ -2.08
SSF2YDR312W DAL80P26343 269 aa2.03□□□□□ -2.08
SSF2YDR312W CIN8P27895 1000 aa2.03□□□□□ -2.08
SSF2YDR312W YKL071WP36086 256 aa2.03□□□□□ -2.08
SSF2YDR312W RRF1P38771 230 aa2.03□□□□□ -2.08
SSF2YDR312W YER184CP39961 794 aa2.03□□□□□ -2.08
SSF2YDR312W INA22P40576 216 aa2.03□□□□□ -2.08
SSF2YDR312W CDC40P40968 455 aaPredicted RBP2.03□□□□□ -2.08
SSF2YDR312W LSG1P53145 640 aaKnown RBP2.03□□□□□ -2.08
SSF2YDR312W ALG11P53954 548 aaKnown RBP2.03□□□□□ -2.08
SSF2YDR312W SUR7P54003 302 aa2.03□□□□□ -2.08
SSF2YDR312W MRX11Q03079 207 aa2.03□□□□□ -2.08
SSF2YDR312W PRM4Q12498 284 aa2.03□□□□□ -2.08
SSF2YDR312W YOL085CQ99345 113 aa2.03□□□□□ -2.08
SSF2YDR312W YCL042WP25572 119 aa2.02□□□□□ -2.09
SSF2YDR312W MEI5P32489 222 aa2.02□□□□□ -2.09
SSF2YDR312W RCK2P38623 610 aa2.02□□□□□ -2.09
SSF2YDR312W YHR035WP38769 630 aa2.02□□□□□ -2.09
SSF2YDR312W SMF2P38778 549 aa2.02□□□□□ -2.09
SSF2YDR312W END3P39013 349 aa2.02□□□□□ -2.09
SSF2YDR312W MNN9P39107 395 aaKnown RBP2.02□□□□□ -2.09
SSF2YDR312W FHL1P39521 936 aa2.02□□□□□ -2.09
SSF2YDR312W TIF34P40217 347 aaKnown RBP2.02□□□□□ -2.09
SSF2YDR312W FIS1P40515 155 aa2.02□□□□□ -2.09
SSF2YDR312W ERG10P41338 398 aaKnown RBP2.02□□□□□ -2.09
SSF2YDR312W STB1P42845 420 aa2.02□□□□□ -2.09
SSF2YDR312W COX16P47081 118 aa2.02□□□□□ -2.09
SSF2YDR312W NAS6P50086 228 aa2.02□□□□□ -2.09
SSF2YDR312W VOA1P53262 265 aa2.02□□□□□ -2.09
SSF2YDR312W PXR1P53335 271 aaPredicted RBP2.02□□□□□ -2.09
SSF2YDR312W EGD1Q02642 157 aaKnown RBP2.02□□□□□ -2.09
SSF2YDR312W CAB5Q03941 241 aa2.02□□□□□ -2.09
SSF2YDR312W FAR10Q06001 478 aa2.02□□□□□ -2.09
SSF2YDR312W MDY2Q12285 212 aa2.02□□□□□ -2.09
SSF2YDR312W DCP1Q12517 231 aaPredicted RBP2.02□□□□□ -2.09
SSF2YDR312W SPO24Q3E752 67 aa2.02□□□□□ -2.09
SSF2YDR312W RAD3P06839 778 aa2.01□□□□□ -2.09
SSF2YDR312W RPL18AP0CX49 186 aaKnown RBP2.01□□□□□ -2.09
SSF2YDR312W RPL18BP0CX50 186 aaKnown RBP2.01□□□□□ -2.09
SSF2YDR312W EPT1P22140 391 aa2.01□□□□□ -2.09
SSF2YDR312W RAD23P32628 398 aaKnown RBP2.01□□□□□ -2.09
SSF2YDR312W SKG6P32900 734 aaPredicted RBP2.01□□□□□ -2.09
SSF2YDR312W KTI12P34253 313 aaKnown RBP2.01□□□□□ -2.09
SSF2YDR312W DTR1P38125 572 aa2.01□□□□□ -2.09
SSF2YDR312W IML3P38265 245 aa2.01□□□□□ -2.09
SSF2YDR312W SWC5P38326 303 aa2.01□□□□□ -2.09
SSF2YDR312W SCS7Q03529 384 aa2.01□□□□□ -2.09
SSF2YDR312W APC4Q04601 652 aa2.01□□□□□ -2.09
SSF2YDR312W BUR2Q05949 395 aa2.01□□□□□ -2.09
SSF2YDR312W STE23Q06010 1027 aa2.01□□□□□ -2.09
SSF2YDR312W RRG8Q06109 277 aa2.01□□□□□ -2.09
SSF2YDR312W BCP1Q06338 283 aa2.01□□□□□ -2.09
SSF2YDR312W YLR012CQ07927 99 aa2.01□□□□□ -2.09
SSF2YDR312W DDC1Q08949 612 aa2.01□□□□□ -2.09
SSF2YDR312W STE2D6VTK4 431 aa2□□□□□ -2.09
SSF2YDR312W VPS63O13549 108 aa2□□□□□ -2.09
SSF2YDR312W ILV1P00927 576 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W DAL82P21705 255 aa2□□□□□ -2.09
SSF2YDR312W VPS3P23643 1011 aa2□□□□□ -2.09
SSF2YDR312W IFM1P25038 676 aa2□□□□□ -2.09
SSF2YDR312W RPL5P26321 297 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W YPS1P32329 569 aa2□□□□□ -2.09
SSF2YDR312W SPS19P32573 292 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W YKL187CP34231 750 aa2□□□□□ -2.09
SSF2YDR312W ECM34P38728 170 aa2□□□□□ -2.09
SSF2YDR312W RRT13P40042 185 aa2□□□□□ -2.09
SSF2YDR312W AIM20P40451 204 aa2□□□□□ -2.09
SSF2YDR312W YCH1P42937 148 aa2□□□□□ -2.09
SSF2YDR312W MIC19P43594 170 aa2□□□□□ -2.09
SSF2YDR312W YFR018CP43599 363 aa2□□□□□ -2.09
SSF2YDR312W PMT4P46971 762 aa2□□□□□ -2.09
SSF2YDR312W YGR067CP53243 804 aa2□□□□□ -2.09
SSF2YDR312W YGR168CP53293 376 aa2□□□□□ -2.09
SSF2YDR312W SED5Q01590 340 aa2□□□□□ -2.09
SSF2YDR312W CWC21Q03375 135 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W SMD2Q06217 110 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W MRX9Q07349 420 aaKnown RBP2□□□□□ -2.09
SSF2YDR312W REP1P03871 373 aa1.99□□□□□ -2.09
SSF2YDR312W BGL2P15703 313 aaKnown RBP1.99□□□□□ -2.09
SSF2YDR312W COT1P32798 439 aa1.99□□□□□ -2.09
SSF2YDR312W TIP20P33891 701 aa1.99□□□□□ -2.09
SSF2YDR312W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SSF2YDR312W MRPL40P36534 297 aa1.99□□□□□ -2.09
SSF2YDR312W ATG12P38316 186 aa1.99□□□□□ -2.09
SSF2YDR312W GGC1P38988 300 aa1.99□□□□□ -2.09
SSF2YDR312W PCL7P40186 285 aa1.99□□□□□ -2.09
SSF2YDR312W NUP84P52891 726 aa1.99□□□□□ -2.09
SSF2YDR312W OKP1P53298 406 aa1.99□□□□□ -2.09
SSF2YDR312W SPO19Q03029 223 aa1.99□□□□□ -2.09
SSF2YDR312W CDD1Q06549 142 aa1.99□□□□□ -2.09
SSF2YDR312W RDL2Q08742 149 aaKnown RBP1.99□□□□□ -2.09
SSF2YDR312W YPL245WQ12179 454 aaKnown RBP1.99□□□□□ -2.09
SSF2YDR312W SIA1Q12212 622 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms