RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W USE1P53146 245 aa5.18□□□□□ -1.58
VMS1YDR049W LST7P53237 242 aa5.18□□□□□ -1.58
VMS1YDR049W GPI15P53961 229 aa5.18□□□□□ -1.58
VMS1YDR049W GRX8Q05926 109 aa5.18□□□□□ -1.58
VMS1YDR049W MRX9Q07349 420 aaKnown RBP5.18□□□□□ -1.58
VMS1YDR049W YLR050CQ12155 161 aaKnown RBP5.18□□□□□ -1.58
VMS1YDR049W HEM2P05373 342 aa5.17□□□□□ -1.58
VMS1YDR049W RPL31AP0C2H8 113 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W PMT2P31382 759 aa5.17□□□□□ -1.58
VMS1YDR049W MUD1P32605 298 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W YKL097CP34245 136 aa5.17□□□□□ -1.58
VMS1YDR049W ARP1P38696 384 aa5.17□□□□□ -1.58
VMS1YDR049W VPS52P39904 641 aa5.17□□□□□ -1.58
VMS1YDR049W RMD6P39975 231 aa5.17□□□□□ -1.58
VMS1YDR049W HPM1P40481 377 aa5.17□□□□□ -1.58
VMS1YDR049W YJR012CP47087 207 aa5.17□□□□□ -1.58
VMS1YDR049W CAF40P53829 373 aa5.17□□□□□ -1.58
VMS1YDR049W AIM34Q03673 198 aa5.17□□□□□ -1.58
VMS1YDR049W SNX41Q04053 625 aa5.17□□□□□ -1.58
VMS1YDR049W YMR034CQ05131 434 aaPredicted RBP5.17□□□□□ -1.58
VMS1YDR049W CTR3Q06686 241 aa5.17□□□□□ -1.58
VMS1YDR049W HEM25Q07534 307 aa5.17□□□□□ -1.58
VMS1YDR049W RGT2Q12300 763 aa5.17□□□□□ -1.58
VMS1YDR049W ICT1Q12385 394 aa5.17□□□□□ -1.58
VMS1YDR049W AGC1Q12482 902 aa5.17□□□□□ -1.58
VMS1YDR049W TY3B-GQ99315 1547 aa5.17□□□□□ -1.58
VMS1YDR049W TPI1P00942 248 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W RPL20AP0CX23 172 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W RPL20BP0CX24 172 aaPredicted RBP5.17□□□□□ -1.58
VMS1YDR049W QRI5P32344 111 aa5.17□□□□□ -1.58
VMS1YDR049W APE2P32454 952 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W KAR9P32526 644 aa5.17□□□□□ -1.58
VMS1YDR049W YHR035WP38769 630 aa5.17□□□□□ -1.58
VMS1YDR049W CSM2P40465 213 aa5.17□□□□□ -1.58
VMS1YDR049W GUF1P46943 645 aa5.17□□□□□ -1.58
VMS1YDR049W UBC11P52492 156 aa5.17□□□□□ -1.58
VMS1YDR049W MTM1P53320 366 aa5.17□□□□□ -1.58
VMS1YDR049W DUG3P53871 357 aa5.17□□□□□ -1.58
VMS1YDR049W YVH1Q02256 364 aaKnown RBP5.17□□□□□ -1.58
VMS1YDR049W NEJ1Q06148 342 aa5.17□□□□□ -1.58
VMS1YDR049W SKI7Q08491 747 aaPredicted RBP5.17□□□□□ -1.58
VMS1YDR049W VPS15P22219 1454 aa5.17□□□□□ -1.58
VMS1YDR049W SEC22P22214 214 aa5.16□□□□□ -1.58
VMS1YDR049W MGT1P26188 188 aa5.16□□□□□ -1.58
VMS1YDR049W MKK1P32490 508 aa5.16□□□□□ -1.58
VMS1YDR049W SPS18P32572 300 aa5.16□□□□□ -1.58
VMS1YDR049W JEN1P36035 616 aa5.16□□□□□ -1.58
VMS1YDR049W FAA2P39518 744 aa5.16□□□□□ -1.58
VMS1YDR049W YER076CP40049 302 aa5.16□□□□□ -1.58
VMS1YDR049W CHA4P43634 648 aa5.16□□□□□ -1.58
VMS1YDR049W YLR152CP54072 576 aa5.16□□□□□ -1.58
VMS1YDR049W YOR283WQ12040 230 aaKnown RBP5.16□□□□□ -1.58
VMS1YDR049W IZH4Q99393 312 aa5.16□□□□□ -1.58
VMS1YDR049W GCN2P15442 1659 aa5.16□□□□□ -1.58
VMS1YDR049W NTE1Q04958 1679 aa5.16□□□□□ -1.58
VMS1YDR049W YKR041WP36134 250 aa5.15□□□□□ -1.58
VMS1YDR049W RBG1P39729 369 aa5.15□□□□□ -1.58
VMS1YDR049W YCH1P42937 148 aa5.15□□□□□ -1.58
VMS1YDR049W MAL13P53338 473 aa5.15□□□□□ -1.58
VMS1YDR049W ASI3P53983 676 aa5.15□□□□□ -1.58
VMS1YDR049W ARL3Q02804 198 aa5.15□□□□□ -1.58
VMS1YDR049W CCE1Q03702 353 aa5.15□□□□□ -1.58
VMS1YDR049W CSN9Q03981 162 aa5.15□□□□□ -1.58
VMS1YDR049W SUT2Q12286 268 aa5.15□□□□□ -1.58
VMS1YDR049W EFG1Q3E705 233 aaKnown RBP5.15□□□□□ -1.58
VMS1YDR049W SPT3P06844 337 aa5.15□□□□□ -1.59
VMS1YDR049W TKL1P23254 680 aaKnown RBP5.15□□□□□ -1.59
VMS1YDR049W COX13P32799 129 aa5.15□□□□□ -1.59
VMS1YDR049W UBP5P39944 805 aa5.15□□□□□ -1.59
VMS1YDR049W CTK3P46963 296 aaPredicted RBP5.15□□□□□ -1.59
VMS1YDR049W POP6P53218 158 aa5.15□□□□□ -1.59
VMS1YDR049W GTF1P53260 183 aaPredicted RBP5.15□□□□□ -1.59
VMS1YDR049W CPR8P53728 308 aa5.15□□□□□ -1.59
VMS1YDR049W DPP1Q05521 289 aa5.15□□□□□ -1.59
VMS1YDR049W GAS2Q06135 555 aa5.15□□□□□ -1.59
VMS1YDR049W MCH4Q08268 501 aa5.15□□□□□ -1.59
VMS1YDR049W SME1Q12330 94 aaPredicted RBP5.15□□□□□ -1.59
VMS1YDR049W SNU23Q12368 194 aaPredicted RBP5.15□□□□□ -1.59
VMS1YDR049W NPC2Q12408 173 aa5.15□□□□□ -1.59
VMS1YDR049W RPO21P04050 1733 aaKnown RBP5.15□□□□□ -1.59
VMS1YDR049W SIR4P11978 1358 aa5.15□□□□□ -1.59
VMS1YDR049W PDR5P33302 1511 aaKnown RBP5.15□□□□□ -1.59
VMS1YDR049W YBT1P32386 1661 aa5.15□□□□□ -1.59
VMS1YDR049W CYC1P00044 109 aaPredicted RBP5.14□□□□□ -1.59
VMS1YDR049W HIS3P06633 220 aa5.14□□□□□ -1.59
VMS1YDR049W TUB1P09733 447 aaKnown RBP5.14□□□□□ -1.59
VMS1YDR049W MTF1P14908 341 aaKnown RBP5.14□□□□□ -1.59
VMS1YDR049W HEM15P16622 393 aa5.14□□□□□ -1.59
VMS1YDR049W GRX2P17695 143 aaKnown RBP5.14□□□□□ -1.59
VMS1YDR049W PHO80P20052 293 aa5.14□□□□□ -1.59
VMS1YDR049W SLY1P22213 666 aa5.14□□□□□ -1.59
VMS1YDR049W BUD23P25627 275 aaPredicted RBP5.14□□□□□ -1.59
VMS1YDR049W SAC1P32368 623 aaKnown RBP5.14□□□□□ -1.59
VMS1YDR049W MRPL17P36528 281 aa5.14□□□□□ -1.59
VMS1YDR049W HEK2P38199 381 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
VMS1YDR049W PRS3P38689 320 aaKnown RBP5.14□□□□□ -1.59
VMS1YDR049W OST3P48439 350 aa5.14□□□□□ -1.59
VMS1YDR049W MST27P53176 234 aa5.14□□□□□ -1.59
VMS1YDR049W BUD32P53323 261 aa5.14□□□□□ -1.59
VMS1YDR049W YMR279CQ03263 540 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms