RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W SGN1P40561 250 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
TRM3YDL112W FMP32P43557 207 aa1.46□□□□□ -2.18
TRM3YDL112W IRC7P43623 340 aa1.46□□□□□ -2.18
TRM3YDL112W IMD4P50094 524 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W SCS7Q03529 384 aa1.46□□□□□ -2.18
TRM3YDL112W NAT4Q04751 285 aa1.46□□□□□ -2.18
TRM3YDL112W BRX1Q08235 291 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W SRL2Q12020 392 aa1.46□□□□□ -2.18
TRM3YDL112W GEP5Q12393 293 aa1.46□□□□□ -2.18
TRM3YDL112W FOL3Q12676 427 aaPredicted RBP1.46□□□□□ -2.18
TRM3YDL112W RAS2P01120 322 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W UGA1P17649 471 aa1.46□□□□□ -2.18
TRM3YDL112W CDC10P25342 322 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W RPB9P27999 122 aa1.46□□□□□ -2.18
TRM3YDL112W ZIP1P31111 875 aa1.46□□□□□ -2.18
TRM3YDL112W ASF2P32448 525 aaPredicted RBP1.46□□□□□ -2.18
TRM3YDL112W RIB1P38066 345 aa1.46□□□□□ -2.18
TRM3YDL112W YBR220CP38318 560 aa1.46□□□□□ -2.18
TRM3YDL112W YGR201CP42936 225 aa1.46□□□□□ -2.18
TRM3YDL112W YIP5P53108 310 aa1.46□□□□□ -2.18
TRM3YDL112W DBP6P53734 629 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W RSM23Q01163 450 aa1.46□□□□□ -2.18
TRM3YDL112W EKI1Q03764 534 aa1.46□□□□□ -2.18
TRM3YDL112W YDL109CQ12103 647 aa1.46□□□□□ -2.18
TRM3YDL112W RPL3P14126 387 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W MDH2P22133 377 aa1.45□□□□□ -2.18
TRM3YDL112W COQ3P27680 312 aa1.45□□□□□ -2.18
TRM3YDL112W MNS1P32906 549 aa1.45□□□□□ -2.18
TRM3YDL112W YKL071WP36086 256 aa1.45□□□□□ -2.18
TRM3YDL112W PRY2P36110 329 aa1.45□□□□□ -2.18
TRM3YDL112W IST2P38250 946 aa1.45□□□□□ -2.18
TRM3YDL112W MRX1P40050 688 aa1.45□□□□□ -2.18
TRM3YDL112W YIL169CP40442 995 aa1.45□□□□□ -2.18
TRM3YDL112W TOM22P49334 152 aa1.45□□□□□ -2.18
TRM3YDL112W SHE4P51534 789 aa1.45□□□□□ -2.18
TRM3YDL112W MNT4P53745 580 aa1.45□□□□□ -2.18
TRM3YDL112W MTQ1P53944 314 aa1.45□□□□□ -2.18
TRM3YDL112W RSC9Q03124 581 aa1.45□□□□□ -2.18
TRM3YDL112W MCH4Q08268 501 aa1.45□□□□□ -2.18
TRM3YDL112W ERP4Q12450 207 aa1.45□□□□□ -2.18
TRM3YDL112W YOR343CQ12484 108 aa1.45□□□□□ -2.18
TRM3YDL112W FSH3Q99369 266 aa1.45□□□□□ -2.18
TRM3YDL112W RPL6BP05739 176 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W DPM1P14020 267 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W ARO3P14843 370 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W SPO7P18410 259 aa1.45□□□□□ -2.18
TRM3YDL112W CAM1P29547 415 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W ATP7P30902 174 aa1.45□□□□□ -2.18
TRM3YDL112W YKL187CP34231 750 aa1.45□□□□□ -2.18
TRM3YDL112W MTC6P38849 526 aa1.45□□□□□ -2.18
TRM3YDL112W YIL029CP40538 142 aa1.45□□□□□ -2.18
TRM3YDL112W YIR020CP40575 100 aa1.45□□□□□ -2.18
TRM3YDL112W MRM2P53123 320 aa1.45□□□□□ -2.18
TRM3YDL112W TWF1P53250 332 aa1.45□□□□□ -2.18
TRM3YDL112W RCE1Q03530 315 aa1.45□□□□□ -2.18
TRM3YDL112W SNX41Q04053 625 aa1.45□□□□□ -2.18
TRM3YDL112W YDR387CQ04162 555 aa1.45□□□□□ -2.18
TRM3YDL112W COQ11Q05892 277 aa1.45□□□□□ -2.18
TRM3YDL112W SNT309Q06091 175 aaPredicted RBP1.45□□□□□ -2.18
TRM3YDL112W TAZ1Q06510 381 aa1.45□□□□□ -2.18
TRM3YDL112W YPR202WQ08993 238 aa1.45□□□□□ -2.18
TRM3YDL112W TFS1P14306 219 aa1.45□□□□□ -2.18
TRM3YDL112W GSH1P32477 678 aa1.45□□□□□ -2.18
TRM3YDL112W TOA1P32773 286 aa1.45□□□□□ -2.18
TRM3YDL112W SIP2P34164 415 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W MTC4P38335 694 aaKnown RBP1.45□□□□□ -2.18
TRM3YDL112W BNA1P47096 177 aa1.45□□□□□ -2.18
TRM3YDL112W SIP18P50263 79 aa1.45□□□□□ -2.18
TRM3YDL112W GMC1Q04399 608 aa1.45□□□□□ -2.18
TRM3YDL112W FRE3Q08905 711 aa1.45□□□□□ -2.18
TRM3YDL112W RKM1Q08961 583 aaPredicted RBP1.45□□□□□ -2.18
TRM3YDL112W CRC1Q12289 327 aa1.45□□□□□ -2.18
TRM3YDL112W RPS23AP0CX29 145 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W RPS23BP0CX30 145 aa1.44□□□□□ -2.18
TRM3YDL112W DAL80P26343 269 aa1.44□□□□□ -2.18
TRM3YDL112W ITR2P30606 609 aa1.44□□□□□ -2.18
TRM3YDL112W SNC1P31109 117 aa1.44□□□□□ -2.18
TRM3YDL112W CYS4P32582 507 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W MRPL17P36528 281 aa1.44□□□□□ -2.18
TRM3YDL112W YBR241CP38142 488 aa1.44□□□□□ -2.18
TRM3YDL112W ARN2P38724 620 aa1.44□□□□□ -2.18
TRM3YDL112W DDI1P40087 428 aa1.44□□□□□ -2.18
TRM3YDL112W YER188WP40103 239 aa1.44□□□□□ -2.18
TRM3YDL112W TDA10P42938 290 aa1.44□□□□□ -2.18
TRM3YDL112W MOB2P43563 287 aa1.44□□□□□ -2.18
TRM3YDL112W NUP57P48837 541 aa1.44□□□□□ -2.18
TRM3YDL112W MPC1P53157 130 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W COS1P53822 381 aa1.44□□□□□ -2.18
TRM3YDL112W YMR279CQ03263 540 aa1.44□□□□□ -2.18
TRM3YDL112W SPO77Q06134 477 aa1.44□□□□□ -2.18
TRM3YDL112W SNX3Q08826 162 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W IZH2Q12442 317 aa1.44□□□□□ -2.18
TRM3YDL112W YOL087CQ99247 1116 aa1.44□□□□□ -2.18
TRM3YDL112W YPT6Q99260 215 aa1.44□□□□□ -2.18
TRM3YDL112W CCW14O13547 238 aa1.44□□□□□ -2.18
TRM3YDL112W MER1P16523 270 aa1.44□□□□□ -2.18
TRM3YDL112W EXG1P23776 448 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W SUA7P29055 345 aaPredicted RBP1.44□□□□□ -2.18
TRM3YDL112W MDH3P32419 343 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
TRM3YDL112W MRE11P32829 692 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 110 ms