RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W URE2P23202 354 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W MDH3P32419 343 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SHM1YBR263W PAD1P33751 242 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SHM1YBR263W COS9P36034 407 aa5□□□□□ -1.61
SHM1YBR263W RPS20P38701 121 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W ARN2P38724 620 aa5□□□□□ -1.61
SHM1YBR263W FET3P38993 636 aa5□□□□□ -1.61
SHM1YBR263W RIO2P40160 425 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W RFC4P40339 323 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W NAS2P40555 220 aa5□□□□□ -1.61
SHM1YBR263W NIT2P47016 307 aa5□□□□□ -1.61
SHM1YBR263W MDE1P47095 244 aa5□□□□□ -1.61
SHM1YBR263W RRN9P53437 365 aa5□□□□□ -1.61
SHM1YBR263W PGA1P53896 198 aa5□□□□□ -1.61
SHM1YBR263W GAS2Q06135 555 aa5□□□□□ -1.61
SHM1YBR263W YPR147CQ06522 304 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W PHO2P07269 559 aa5□□□□□ -1.61
SHM1YBR263W UTR1P21373 530 aa5□□□□□ -1.61
SHM1YBR263W PTC6P25646 442 aa5□□□□□ -1.61
SHM1YBR263W IPT1P38954 527 aa5□□□□□ -1.61
SHM1YBR263W KRE29P40026 464 aa5□□□□□ -1.61
SHM1YBR263W MSS2P40990 351 aa5□□□□□ -1.61
SHM1YBR263W RET2P43621 546 aa5□□□□□ -1.61
SHM1YBR263W BRR6P53062 197 aa5□□□□□ -1.61
SHM1YBR263W BSC5P53755 489 aa5□□□□□ -1.61
SHM1YBR263W VBA4Q04602 768 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W RKM1Q08961 583 aaPredicted RBP5□□□□□ -1.61
SHM1YBR263W SFG1Q12507 346 aa5□□□□□ -1.61
SHM1YBR263W RPP2AP05319 106 aaKnown RBP4.99□□□□□ -1.61
SHM1YBR263W CBP6P07253 162 aaPredicted RBP4.99□□□□□ -1.61
SHM1YBR263W YCL002CP25565 263 aa4.99□□□□□ -1.61
SHM1YBR263W THI4P32318 326 aa4.99□□□□□ -1.61
SHM1YBR263W CHK1P38147 527 aa4.99□□□□□ -1.61
SHM1YBR263W MSY1P48527 492 aa4.99□□□□□ -1.61
SHM1YBR263W HSV2P50079 448 aaPredicted RBP4.99□□□□□ -1.61
SHM1YBR263W HRI1Q05905 244 aaKnown RBP4.99□□□□□ -1.61
SHM1YBR263W YLR040CQ07988 224 aa4.99□□□□□ -1.61
SHM1YBR263W YGK3Q12222 375 aaPredicted RBP4.99□□□□□ -1.61
SHM1YBR263W PRS5Q12265 496 aaKnown RBP4.99□□□□□ -1.61
SHM1YBR263W MED11Q99278 115 aa4.99□□□□□ -1.61
SHM1YBR263W MET2P08465 486 aa4.98□□□□□ -1.61
SHM1YBR263W PHO80P20052 293 aa4.98□□□□□ -1.61
SHM1YBR263W IDP1P21954 428 aaKnown RBP4.98□□□□□ -1.61
SHM1YBR263W PPA2P28239 310 aa4.98□□□□□ -1.61
SHM1YBR263W NDC1P32500 655 aa4.98□□□□□ -1.61
SHM1YBR263W YME2P32843 850 aa4.98□□□□□ -1.61
SHM1YBR263W ECM4P36156 370 aa4.98□□□□□ -1.61
SHM1YBR263W MAL32P38158 584 aa4.98□□□□□ -1.61
SHM1YBR263W GPI16P38875 610 aa4.98□□□□□ -1.61
SHM1YBR263W AVT6P40074 448 aa4.98□□□□□ -1.61
SHM1YBR263W SSY5P47002 699 aa4.98□□□□□ -1.61
SHM1YBR263W COS10P52924 374 aa4.98□□□□□ -1.61
SHM1YBR263W NQM1P53228 333 aaPredicted RBP4.98□□□□□ -1.61
SHM1YBR263W MAL12P53341 584 aa4.98□□□□□ -1.61
SHM1YBR263W BUD17P53727 317 aa4.98□□□□□ -1.61
SHM1YBR263W YML122CQ03207 126 aa4.98□□□□□ -1.61
SHM1YBR263W SPC19Q03954 165 aa4.98□□□□□ -1.61
SHM1YBR263W TAZ1Q06510 381 aa4.98□□□□□ -1.61
SHM1YBR263W MLC2Q06580 163 aa4.98□□□□□ -1.61
SHM1YBR263W GSH2Q08220 491 aa4.98□□□□□ -1.61
SHM1YBR263W NIP7Q08962 181 aaKnown RBP4.98□□□□□ -1.61
SHM1YBR263W BAG7Q12128 409 aa4.98□□□□□ -1.61
SHM1YBR263W HMS1Q12398 434 aa4.98□□□□□ -1.61
SHM1YBR263W TRM10Q12400 293 aa4.98□□□□□ -1.61
SHM1YBR263W LAS17Q12446 633 aa4.98□□□□□ -1.61
SHM1YBR263W YGR161W-CQ3E744 92 aa4.98□□□□□ -1.61
SHM1YBR263W MCM10P32354 571 aa4.97□□□□□ -1.61
SHM1YBR263W YMR262WP38430 313 aa4.97□□□□□ -1.61
SHM1YBR263W GOS1P38736 223 aa4.97□□□□□ -1.61
SHM1YBR263W MDM31P38880 579 aa4.97□□□□□ -1.61
SHM1YBR263W MLH1P38920 769 aa4.97□□□□□ -1.61
SHM1YBR263W AIM10P39965 576 aaKnown RBP4.97□□□□□ -1.61
SHM1YBR263W TYW3P53177 273 aa4.97□□□□□ -1.61
SHM1YBR263W ALG12P53730 551 aa4.97□□□□□ -1.61
SHM1YBR263W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
SHM1YBR263W FIN1Q03898 291 aa4.97□□□□□ -1.61
SHM1YBR263W YMR087WQ04299 284 aa4.97□□□□□ -1.61
SHM1YBR263W MIM1Q08176 113 aa4.97□□□□□ -1.61
SHM1YBR263W PCL9Q12477 304 aa4.97□□□□□ -1.61
SHM1YBR263W YHR214C-EQ8TGK0 99 aa4.97□□□□□ -1.61
SHM1YBR263W OPI3P05375 206 aa4.96□□□□□ -1.62
SHM1YBR263W MET17P06106 444 aa4.96□□□□□ -1.62
SHM1YBR263W CPR2P23285 205 aa4.96□□□□□ -1.62
SHM1YBR263W CNA1P23287 553 aa4.96□□□□□ -1.62
SHM1YBR263W CAM1P29547 415 aaKnown RBP4.96□□□□□ -1.62
SHM1YBR263W ITR1P30605 584 aa4.96□□□□□ -1.62
SHM1YBR263W SUR1P33300 382 aa4.96□□□□□ -1.62
SHM1YBR263W SOF1P33750 489 aaKnown RBP4.96□□□□□ -1.62
SHM1YBR263W MIA40P36046 403 aa4.96□□□□□ -1.62
SHM1YBR263W YHR035WP38769 630 aa4.96□□□□□ -1.62
SHM1YBR263W MTC6P38849 526 aa4.96□□□□□ -1.62
SHM1YBR263W PTH1P38876 190 aaKnown RBP4.96□□□□□ -1.62
SHM1YBR263W XBP1P40489 647 aa4.96□□□□□ -1.62
SHM1YBR263W HIS6P40545 261 aa4.96□□□□□ -1.62
SHM1YBR263W SFH5P47008 294 aa4.96□□□□□ -1.62
SHM1YBR263W ADO1P47143 340 aaKnown RBP4.96□□□□□ -1.62
SHM1YBR263W MNT4P53745 580 aa4.96□□□□□ -1.62
SHM1YBR263W APM1Q00776 475 aaPredicted RBP4.96□□□□□ -1.62
SHM1YBR263W NUP116Q02630 1113 aa4.96□□□□□ -1.62
SHM1YBR263W KAP120Q02932 1032 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 150.6 ms