RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W MRPL35Q06678 367 aa3.08□□□□□ -1.92
NUP60YAR002W SYO1Q07395 620 aa3.08□□□□□ -1.92
NUP60YAR002W YDL086WQ07505 273 aa3.08□□□□□ -1.92
NUP60YAR002W HSP33Q08914 237 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W HSP32Q08992 237 aa3.08□□□□□ -1.92
NUP60YAR002W USV1Q12132 391 aa3.08□□□□□ -1.92
NUP60YAR002W FRE6Q12473 712 aa3.08□□□□□ -1.92
NUP60YAR002W QCR7P00128 127 aa3.08□□□□□ -1.92
NUP60YAR002W KIN28P06242 306 aa3.08□□□□□ -1.92
NUP60YAR002W BAR1P12630 587 aa3.08□□□□□ -1.92
NUP60YAR002W GPI12P23797 304 aa3.08□□□□□ -1.92
NUP60YAR002W MXR2P25566 168 aa3.08□□□□□ -1.92
NUP60YAR002W PBN1P25580 416 aa3.08□□□□□ -1.92
NUP60YAR002W FUN26P31381 517 aa3.08□□□□□ -1.92
NUP60YAR002W DOA4P32571 926 aa3.08□□□□□ -1.92
NUP60YAR002W TIM12P32830 109 aa3.08□□□□□ -1.92
NUP60YAR002W PPQ1P32945 549 aa3.08□□□□□ -1.92
NUP60YAR002W TMA19P35691 167 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W RPS27AP35997 82 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W JEN1P36035 616 aa3.08□□□□□ -1.92
NUP60YAR002W SHE2P36068 246 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
NUP60YAR002W UTP30P36144 274 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W MAL32P38158 584 aa3.08□□□□□ -1.92
NUP60YAR002W RPS27BP38711 82 aa3.08□□□□□ -1.92
NUP60YAR002W UTP25P40498 721 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W HIS6P40545 261 aa3.08□□□□□ -1.92
NUP60YAR002W PAM16P42949 149 aa3.08□□□□□ -1.92
NUP60YAR002W RPE1P46969 238 aa3.08□□□□□ -1.92
NUP60YAR002W APS3P47064 194 aa3.08□□□□□ -1.92
NUP60YAR002W YGR151CP53287 111 aa3.08□□□□□ -1.92
NUP60YAR002W MAL12P53341 584 aa3.08□□□□□ -1.92
NUP60YAR002W YNR062CP53748 327 aa3.08□□□□□ -1.92
NUP60YAR002W LSM7P53905 115 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W NUP116Q02630 1113 aa3.08□□□□□ -1.92
NUP60YAR002W MFB1Q04922 465 aa3.08□□□□□ -1.92
NUP60YAR002W TPO3Q06451 622 aa3.08□□□□□ -1.92
NUP60YAR002W TSR2Q06672 205 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W YLR030WQ07967 263 aa3.08□□□□□ -1.92
NUP60YAR002W YOR283WQ12040 230 aaKnown RBP3.08□□□□□ -1.92
NUP60YAR002W YPR1Q12458 312 aa3.08□□□□□ -1.92
NUP60YAR002W PSF1Q12488 208 aa3.08□□□□□ -1.92
NUP60YAR002W YLR099W-AQ3E798 87 aa3.08□□□□□ -1.92
NUP60YAR002W RPL20AP0CX23 172 aaKnown RBP3.07□□□□□ -1.92
NUP60YAR002W RPL20BP0CX24 172 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W RPS18AP0CX55 146 aaKnown RBP3.07□□□□□ -1.92
NUP60YAR002W RPS18BP0CX56 146 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W PET122P10355 254 aa3.07□□□□□ -1.92
NUP60YAR002W MRP1P10662 321 aaKnown RBP3.07□□□□□ -1.92
NUP60YAR002W PET54P10834 293 aa3.07□□□□□ -1.92
NUP60YAR002W STE12P13574 688 aa3.07□□□□□ -1.92
NUP60YAR002W STF2P16965 84 aa3.07□□□□□ -1.92
NUP60YAR002W CDC43P18898 376 aa3.07□□□□□ -1.92
NUP60YAR002W YPK2P18961 677 aa3.07□□□□□ -1.92
NUP60YAR002W ATG22P25568 528 aa3.07□□□□□ -1.92
NUP60YAR002W IMG1P25626 169 aa3.07□□□□□ -1.92
NUP60YAR002W FUN19P28003 413 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W CWP1P28319 239 aa3.07□□□□□ -1.92
NUP60YAR002W ERG9P29704 444 aa3.07□□□□□ -1.92
NUP60YAR002W PRE2P30656 287 aaKnown RBP3.07□□□□□ -1.92
NUP60YAR002W HYM1P32464 399 aa3.07□□□□□ -1.92
NUP60YAR002W MTC7P32633 139 aa3.07□□□□□ -1.92
NUP60YAR002W NIC96P34077 839 aa3.07□□□□□ -1.92
NUP60YAR002W YKL071WP36086 256 aa3.07□□□□□ -1.92
NUP60YAR002W ANR2P36090 516 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W CDS1P38221 457 aa3.07□□□□□ -1.92
NUP60YAR002W YBR242WP38331 238 aa3.07□□□□□ -1.92
NUP60YAR002W RRP4P38792 359 aaKnown RBP3.07□□□□□ -1.92
NUP60YAR002W NAB3P38996 802 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
NUP60YAR002W HPA3P39979 161 aa3.07□□□□□ -1.92
NUP60YAR002W LTP1P40347 161 aa3.07□□□□□ -1.92
NUP60YAR002W YIL152WP40455 235 aa3.07□□□□□ -1.92
NUP60YAR002W YIL086CP40503 102 aa3.07□□□□□ -1.92
NUP60YAR002W SYG1P40528 902 aa3.07□□□□□ -1.92
NUP60YAR002W YPS6P40583 537 aa3.07□□□□□ -1.92
NUP60YAR002W PMT5P52867 743 aa3.07□□□□□ -1.92
NUP60YAR002W PEF1P53238 335 aa3.07□□□□□ -1.92
NUP60YAR002W VOA1P53262 265 aa3.07□□□□□ -1.92
NUP60YAR002W NCE101Q02820 53 aa3.07□□□□□ -1.92
NUP60YAR002W YMR252CQ04814 134 aa3.07□□□□□ -1.92
NUP60YAR002W YML053CQ04978 212 aa3.07□□□□□ -1.92
NUP60YAR002W DIC1Q06143 298 aa3.07□□□□□ -1.92
NUP60YAR002W TAZ1Q06510 381 aa3.07□□□□□ -1.92
NUP60YAR002W YOR378WQ08902 515 aa3.07□□□□□ -1.92
NUP60YAR002W FMP40Q08968 688 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W ATG41Q12048 136 aa3.07□□□□□ -1.92
NUP60YAR002W TIR4Q12218 487 aaPredicted RBP3.07□□□□□ -1.92
NUP60YAR002W YMR084WA2P2R3 262 aa3.06□□□□□ -1.92
NUP60YAR002W GCN4P03069 281 aa3.06□□□□□ -1.92
NUP60YAR002W HIS3P06633 220 aa3.06□□□□□ -1.92
NUP60YAR002W PEP4P07267 405 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W YSF3P0C074 85 aaPredicted RBP3.06□□□□□ -1.92
NUP60YAR002W GRX2P17695 143 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W SAR1P20606 190 aaKnown RBP3.06□□□□□ -1.92
NUP60YAR002W BOS1P25385 244 aa3.06□□□□□ -1.92
NUP60YAR002W PUT3P25502 979 aaPredicted RBP3.06□□□□□ -1.92
NUP60YAR002W STP22P25604 385 aa3.06□□□□□ -1.92
NUP60YAR002W YCR102CP25608 368 aa3.06□□□□□ -1.92
NUP60YAR002W CWH43P25618 953 aa3.06□□□□□ -1.92
NUP60YAR002W RNP1P32385 249 aa3.06□□□□□ -1.92
NUP60YAR002W MSS1P32559 526 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms