RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B TVP15Q03860 143 aa-0.29□□□□□ -2.46
snR39BsnR39B AIM33Q04516 312 aa-0.29□□□□□ -2.46
snR39BsnR39B ERB1Q04660 807 aaKnown RBP-0.29□□□□□ -2.46
snR39BsnR39B NNT1Q05874 261 aa-0.29□□□□□ -2.46
snR39BsnR39B VIK1Q12045 647 aa-0.29□□□□□ -2.46
snR39BsnR39B SFI1Q12369 946 aa-0.29□□□□□ -2.46
snR39BsnR39B ATG5Q12380 294 aa-0.29□□□□□ -2.46
snR39BsnR39B NOT5Q12514 560 aaPredicted RBP-0.29□□□□□ -2.46
snR39BsnR39B TOM40P23644 387 aaKnown RBP-0.3□□□□□ -2.46
snR39BsnR39B PUP2P32379 260 aa-0.3□□□□□ -2.46
snR39BsnR39B GPX1P36014 167 aa-0.3□□□□□ -2.46
snR39BsnR39B SPL2P38839 148 aa-0.3□□□□□ -2.46
snR39BsnR39B SUR2P38992 349 aa-0.3□□□□□ -2.46
snR39BsnR39B YGR111WP53265 400 aa-0.3□□□□□ -2.46
snR39BsnR39B MRX9Q07349 420 aaKnown RBP-0.3□□□□□ -2.46
snR39BsnR39B AIM45Q12480 344 aaKnown RBP-0.3□□□□□ -2.46
snR39BsnR39B PAN1P32521 1480 aa-0.3□□□□□ -2.46
snR39BsnR39B RAD1P06777 1100 aa-0.31□□□□□ -2.46
snR39BsnR39B UTR1P21373 530 aa-0.31□□□□□ -2.46
snR39BsnR39B MDH2P22133 377 aa-0.31□□□□□ -2.46
snR39BsnR39B GRR1P24814 1151 aa-0.31□□□□□ -2.46
snR39BsnR39B RPL16BP26785 198 aaKnown RBP-0.31□□□□□ -2.46
snR39BsnR39B MSK1P32048 576 aa-0.31□□□□□ -2.46
snR39BsnR39B MRPL6P32904 214 aa-0.31□□□□□ -2.46
snR39BsnR39B YBR062CP38239 180 aa-0.31□□□□□ -2.46
snR39BsnR39B TCD1P38756 429 aa-0.31□□□□□ -2.46
snR39BsnR39B AAH1P53909 347 aa-0.31□□□□□ -2.46
snR39BsnR39B PRM15Q03262 622 aa-0.31□□□□□ -2.46
snR39BsnR39B SEC13Q04491 297 aaKnown RBP-0.31□□□□□ -2.46
snR39BsnR39B GLE1Q12315 538 aa-0.31□□□□□ -2.46
snR39BsnR39B PRM4Q12498 284 aa-0.31□□□□□ -2.46
snR39BsnR39B FBA1P14540 359 aaKnown RBP-0.32□□□□□ -2.46
snR39BsnR39B CKI1P20485 582 aa-0.32□□□□□ -2.46
snR39BsnR39B ERG9P29704 444 aa-0.32□□□□□ -2.46
snR39BsnR39B SCM4P32564 187 aa-0.32□□□□□ -2.46
snR39BsnR39B SPT8P38915 602 aa-0.32□□□□□ -2.46
snR39BsnR39B MLH1P38920 769 aa-0.32□□□□□ -2.46
snR39BsnR39B YHB1P39676 399 aaKnown RBP-0.32□□□□□ -2.46
snR39BsnR39B TIF34P40217 347 aaKnown RBP-0.32□□□□□ -2.46
snR39BsnR39B CSI2Q08054 341 aa-0.32□□□□□ -2.46
snR39BsnR39B NUP157P40064 1391 aaKnown RBP-0.32□□□□□ -2.46
snR39BsnR39B GCG1P32656 232 aaKnown RBP-0.33□□□□□ -2.46
snR39BsnR39B UPS2P35200 230 aa-0.33□□□□□ -2.46
snR39BsnR39B YBR219CP38317 127 aa-0.33□□□□□ -2.46
snR39BsnR39B RPL13BP40212 199 aaKnown RBP-0.33□□□□□ -2.46
snR39BsnR39B YIL012WP40551 113 aa-0.33□□□□□ -2.46
snR39BsnR39B YFL064CP43540 174 aa-0.33□□□□□ -2.46
snR39BsnR39B COG7P53195 279 aa-0.33□□□□□ -2.46
snR39BsnR39B HCH1P53834 153 aa-0.33□□□□□ -2.46
snR39BsnR39B NAT4Q04751 285 aa-0.33□□□□□ -2.46
snR39BsnR39B RDL2Q08742 149 aaKnown RBP-0.33□□□□□ -2.46
snR39BsnR39B RPL13AQ12690 199 aaPredicted RBP-0.33□□□□□ -2.46
snR39BsnR39B FSH3Q99369 266 aa-0.33□□□□□ -2.46
snR39BsnR39B CYR1P08678 2026 aaKnown RBP-0.34□□□□□ -2.46
snR39BsnR39B ARF2P19146 181 aaKnown RBP-0.34□□□□□ -2.46
snR39BsnR39B SCL1P21243 252 aaKnown RBP-0.34□□□□□ -2.46
snR39BsnR39B HXT2P23585 541 aa-0.34□□□□□ -2.46
snR39BsnR39B MXR2P25566 168 aa-0.34□□□□□ -2.46
snR39BsnR39B PSO2P30620 661 aa-0.34□□□□□ -2.46
snR39BsnR39B LTV1P34078 463 aa-0.34□□□□□ -2.46
snR39BsnR39B TPO5P36029 618 aa-0.34□□□□□ -2.46
snR39BsnR39B YBL028CP38202 106 aa-0.34□□□□□ -2.46
snR39BsnR39B AVT6P40074 448 aa-0.34□□□□□ -2.46
snR39BsnR39B YIL089WP40500 205 aa-0.34□□□□□ -2.46
snR39BsnR39B ZIM17P42844 174 aa-0.34□□□□□ -2.46
snR39BsnR39B GON7P46984 123 aa-0.34□□□□□ -2.46
snR39BsnR39B YPT32P51996 222 aaKnown RBP-0.34□□□□□ -2.46
snR39BsnR39B YNL143CP53908 130 aa-0.34□□□□□ -2.46
snR39BsnR39B CTR3Q06686 241 aa-0.34□□□□□ -2.46
snR39BsnR39B YDL144CQ07589 356 aa-0.34□□□□□ -2.46
snR39BsnR39B YPL278CQ08990 100 aa-0.34□□□□□ -2.46
snR39BsnR39B SFG1Q12507 346 aa-0.34□□□□□ -2.46
snR39BsnR39B YBL112CQ3E7Y4 105 aa-0.34□□□□□ -2.46
snR39BsnR39B ISD11Q6Q560 94 aa-0.34□□□□□ -2.46
snR39BsnR39B SRN2Q99176 213 aa-0.34□□□□□ -2.46
snR39BsnR39B YEL009C-AA0A023PZF2 135 aa-0.35□□□□□ -2.47
snR39BsnR39B DSF1P0CX08 502 aa-0.35□□□□□ -2.47
snR39BsnR39B YNR073CP0CX09 502 aa-0.35□□□□□ -2.47
snR39BsnR39B RPE1P46969 238 aa-0.35□□□□□ -2.47
snR39BsnR39B PRP24P49960 444 aaKnown RBP-0.35□□□□□ -2.47
snR39BsnR39B KEL2P50090 882 aa-0.35□□□□□ -2.47
snR39BsnR39B YNR062CP53748 327 aa-0.35□□□□□ -2.47
snR39BsnR39B YMR114CQ04471 368 aaKnown RBP-0.35□□□□□ -2.47
snR39BsnR39B YLR287CQ05881 355 aa-0.35□□□□□ -2.47
snR39BsnR39B YLR162WQ06235 118 aa-0.35□□□□□ -2.47
snR39BsnR39B YLL007CQ07799 665 aa-0.35□□□□□ -2.47
snR39BsnR39B DCI1Q08558 271 aa-0.35□□□□□ -2.47
snR39BsnR39B OSM1P21375 501 aaKnown RBP-0.36□□□□□ -2.47
snR39BsnR39B DCC1P25559 380 aa-0.36□□□□□ -2.47
snR39BsnR39B IML3P38265 245 aa-0.36□□□□□ -2.47
snR39BsnR39B PEX32P38292 413 aa-0.36□□□□□ -2.47
snR39BsnR39B BMT5P40493 336 aa-0.36□□□□□ -2.47
snR39BsnR39B ERG25P53045 309 aa-0.36□□□□□ -2.47
snR39BsnR39B BUD25P85052 153 aa-0.36□□□□□ -2.47
snR39BsnR39B GYL1Q04322 720 aa-0.36□□□□□ -2.47
snR39BsnR39B YOL160WQ08321 113 aa-0.36□□□□□ -2.47
snR39BsnR39B PEX27Q08580 376 aa-0.36□□□□□ -2.47
snR39BsnR39B MHT1Q12525 324 aa-0.36□□□□□ -2.47
snR39BsnR39B SLH1P53327 1967 aaKnown RBP-0.36□□□□□ -2.47
snR39BsnR39B RPL1AP0CX43 217 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms