RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W COS10P52924 374 aa2.02□□□□□ -2.09
VPS16YPL045W HCH1P53834 153 aa2.02□□□□□ -2.09
VPS16YPL045W MRPS17Q03246 237 aaPredicted RBP2.02□□□□□ -2.09
VPS16YPL045W SNX41Q04053 625 aa2.02□□□□□ -2.09
VPS16YPL045W YLR281CQ05863 155 aa2.02□□□□□ -2.09
VPS16YPL045W YLR012CQ07927 99 aa2.02□□□□□ -2.09
VPS16YPL045W SMC5Q08204 1093 aa2.02□□□□□ -2.09
VPS16YPL045W DDC1Q08949 612 aa2.02□□□□□ -2.09
VPS16YPL045W TMS1Q12116 473 aa2.02□□□□□ -2.09
VPS16YPL045W FCY22Q12119 530 aa2.02□□□□□ -2.09
VPS16YPL045W MSH5Q12175 901 aa2.02□□□□□ -2.09
VPS16YPL045W PCL9Q12477 304 aa2.02□□□□□ -2.09
VPS16YPL045W ILV1P00927 576 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W ATO2P32907 282 aa2.01□□□□□ -2.09
VPS16YPL045W LDB7P38210 180 aa2.01□□□□□ -2.09
VPS16YPL045W RCK2P38623 610 aa2.01□□□□□ -2.09
VPS16YPL045W YIL029CP40538 142 aa2.01□□□□□ -2.09
VPS16YPL045W GDS1P41913 522 aa2.01□□□□□ -2.09
VPS16YPL045W MST27P53176 234 aa2.01□□□□□ -2.09
VPS16YPL045W NOP13P53883 403 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
VPS16YPL045W CDC14Q00684 551 aa2.01□□□□□ -2.09
VPS16YPL045W OST6Q03723 332 aa2.01□□□□□ -2.09
VPS16YPL045W TRM82Q03774 444 aa2.01□□□□□ -2.09
VPS16YPL045W YMR027WQ04371 470 aa2.01□□□□□ -2.09
VPS16YPL045W SSQ1Q05931 657 aaPredicted RBP2.01□□□□□ -2.09
VPS16YPL045W YPR091CQ06833 770 aa2.01□□□□□ -2.09
VPS16YPL045W YDL114WQ07530 308 aa2.01□□□□□ -2.09
VPS16YPL045W POM33Q12164 279 aa2.01□□□□□ -2.09
VPS16YPL045W FRE8Q12209 686 aa2.01□□□□□ -2.09
VPS16YPL045W YOS9Q99220 542 aa2.01□□□□□ -2.09
VPS16YPL045W IZH4Q99393 312 aa2.01□□□□□ -2.09
VPS16YPL045W RSF2P46974 1380 aa2.01□□□□□ -2.09
VPS16YPL045W HIS1P00498 297 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W HEM4P06174 275 aa2.01□□□□□ -2.09
VPS16YPL045W RPL23AP0CX41 137 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W RPL23BP0CX42 137 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W NUP2P32499 720 aa2.01□□□□□ -2.09
VPS16YPL045W MRPL6P32904 214 aa2.01□□□□□ -2.09
VPS16YPL045W MCH2P36032 473 aa2.01□□□□□ -2.09
VPS16YPL045W RPC37P36121 282 aa2.01□□□□□ -2.09
VPS16YPL045W PFS1P38872 237 aa2.01□□□□□ -2.09
VPS16YPL045W NPT1P39683 429 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W NCA3P46955 337 aa2.01□□□□□ -2.09
VPS16YPL045W TAD2P47058 250 aa2.01□□□□□ -2.09
VPS16YPL045W CPD1P53314 239 aa2.01□□□□□ -2.09
VPS16YPL045W MTM1P53320 366 aa2.01□□□□□ -2.09
VPS16YPL045W SCW4P53334 386 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W MRPL50P53724 139 aa2.01□□□□□ -2.09
VPS16YPL045W WSC2P53832 503 aa2.01□□□□□ -2.09
VPS16YPL045W PRM6Q04705 352 aa2.01□□□□□ -2.09
VPS16YPL045W GRS2Q06817 618 aa2.01□□□□□ -2.09
VPS16YPL045W TSR1Q07381 788 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W SNA4Q07549 140 aa2.01□□□□□ -2.09
VPS16YPL045W RDL2Q08742 149 aaKnown RBP2.01□□□□□ -2.09
VPS16YPL045W EAF3Q12432 401 aa2.01□□□□□ -2.09
VPS16YPL045W TRP1P00912 224 aa2□□□□□ -2.09
VPS16YPL045W RHO1P06780 209 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W MRP1P10662 321 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W MCK1P21965 375 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W RPL16BP26785 198 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W PPA2P28239 310 aa2□□□□□ -2.09
VPS16YPL045W FUN26P31381 517 aa2□□□□□ -2.09
VPS16YPL045W ASF2P32448 525 aaPredicted RBP2□□□□□ -2.09
VPS16YPL045W CUE2P36075 443 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W YPC1P38298 316 aa2□□□□□ -2.09
VPS16YPL045W YER034WP40022 185 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W PMT4P46971 762 aa2□□□□□ -2.09
VPS16YPL045W HIT1P46973 164 aa2□□□□□ -2.09
VPS16YPL045W SUR7P54003 302 aa2□□□□□ -2.09
VPS16YPL045W SNZ1Q03148 297 aa2□□□□□ -2.09
VPS16YPL045W SRL1Q08673 210 aa2□□□□□ -2.09
VPS16YPL045W TAF10Q12030 206 aa2□□□□□ -2.09
VPS16YPL045W DAP1Q12091 152 aa2□□□□□ -2.09
VPS16YPL045W YGK3Q12222 375 aaPredicted RBP2□□□□□ -2.09
VPS16YPL045W UTP23Q12339 254 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W ROM2P51862 1356 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W SPS100P13130 326 aa2□□□□□ -2.09
VPS16YPL045W FUS3P16892 353 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W PBN1P25580 416 aa2□□□□□ -2.09
VPS16YPL045W CSE1P33307 960 aa2□□□□□ -2.09
VPS16YPL045W DDI1P40087 428 aa2□□□□□ -2.09
VPS16YPL045W PRM5P40476 318 aa2□□□□□ -2.09
VPS16YPL045W MAM33P40513 266 aa2□□□□□ -2.09
VPS16YPL045W YFL067WP43537 175 aa2□□□□□ -2.09
VPS16YPL045W MSO1P53604 210 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W KRE28Q04431 385 aa2□□□□□ -2.09
VPS16YPL045W SPO77Q06134 477 aa2□□□□□ -2.09
VPS16YPL045W CLP1Q08685 445 aaPredicted RBP2□□□□□ -2.09
VPS16YPL045W YDL109CQ12103 647 aa2□□□□□ -2.09
VPS16YPL045W YDL199CQ12407 687 aa2□□□□□ -2.09
VPS16YPL045W HTZ1Q12692 134 aaKnown RBP2□□□□□ -2.09
VPS16YPL045W SIR4P11978 1358 aa2□□□□□ -2.09
VPS16YPL045W AUS1Q08409 1394 aa2□□□□□ -2.09
VPS16YPL045W RPS18AP0CX55 146 aaKnown RBP1.99□□□□□ -2.09
VPS16YPL045W RPS18BP0CX56 146 aaPredicted RBP1.99□□□□□ -2.09
VPS16YPL045W REV1P12689 985 aa1.99□□□□□ -2.09
VPS16YPL045W TFS1P14306 219 aa1.99□□□□□ -2.09
VPS16YPL045W ZRC1P20107 442 aa1.99□□□□□ -2.09
VPS16YPL045W CPR3P25719 182 aa1.99□□□□□ -2.09
VPS16YPL045W PMT2P31382 759 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms