RNA–Protein interactions for RNA: YNL312W

RFA2, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA2, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA2	YNL312W	COX20	Q04935	205 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	YLR173W	Q06247	608 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	RDL2	Q08742	149 aa	Known RBP	4.68	□□□□□ -1.66
RFA2	YNL312W	TAF10	Q12030	206 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	YOL107W	Q12239	342 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	COX2	P00410	251 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	HHF1	P02309	103 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	RPP0	P05317	312 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	RPS14A	P06367	137 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	NAM9	P27929	486 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	ZRT1	P32804	376 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	YBL059W	P34224	193 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	SWD2	P36104	329 aa	Predicted RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	RPS14B	P39516	138 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	PAN6	P40459	309 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	DFG10	P40526	253 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	YGR210C	P42942	411 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	YNL134C	P53912	376 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	SED5	Q01590	340 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	HRI1	Q05905	244 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	BER1	Q06688	274 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	CMS1	Q07897	291 aa	Known RBP	4.67	□□□□□ -1.66
RFA2	YNL312W	IZH2	Q12442	317 aa		4.67	□□□□□ -1.66
RFA2	YNL312W	ADH2	P00331	348 aa	Known RBP	4.66	□□□□□ -1.66
RFA2	YNL312W	RPS19A	P07280	144 aa	Known RBP	4.66	□□□□□ -1.66
RFA2	YNL312W	RPS19B	P07281	144 aa	Predicted RBP	4.66	□□□□□ -1.66
RFA2	YNL312W	MSF1	P08425	469 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	MIR1	P23641	311 aa	Known RBP	4.66	□□□□□ -1.66
RFA2	YNL312W	MEI5	P32489	222 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	LSM12	P38828	187 aa	Known RBP	4.66	□□□□□ -1.66
RFA2	YNL312W	PRM9	P39551	298 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	YNL320W	P42840	284 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	YJL118W	P47022	219 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	KAP114	P53067	1004 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	CRH1	P53301	507 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	VAC7	P53950	1165 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	SCS7	Q03529	384 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	BOP2	Q06150	570 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	ATP16	Q12165	160 aa		4.66	□□□□□ -1.66
RFA2	YNL312W	RPL31A	P0C2H8	113 aa	Known RBP	4.65	□□□□□ -1.67
RFA2	YNL312W	ARO2	P28777	376 aa	Known RBP	4.65	□□□□□ -1.67
RFA2	YNL312W	PDC2	P32896	925 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	TAE1	P38340	232 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	YAT2	P40017	923 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	SHQ1	P40486	507 aa	Predicted RBP	4.65	□□□□□ -1.67
RFA2	YNL312W	GDS1	P41913	522 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	KEL2	P50090	882 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	HCH1	P53834	153 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	CTS2	Q06350	511 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	PLP2	Q12017	286 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	SFM1	Q12314	213 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	JID1	Q12350	301 aa		4.65	□□□□□ -1.67
RFA2	YNL312W	SPS100	P13130	326 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	CBS2	P14905	389 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	YSR3	P23501	404 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	YFR057W	P43625	151 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	TIS11	P47977	285 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	YGL260W	P53056	76 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	SNX41	Q04053	625 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	GMC2	Q06201	188 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	NAG1	Q8TGN9	163 aa		4.64	□□□□□ -1.67
RFA2	YNL312W	PET123	P17558	318 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	RVS161	P25343	265 aa	Known RBP	4.63	□□□□□ -1.67
RFA2	YNL312W	MCH2	P36032	473 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	YPC1	P38298	316 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	CHL4	P38907	458 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	YER186C	P40101	306 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	MOB2	P43563	287 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	LIA1	P47120	325 aa	Known RBP	4.63	□□□□□ -1.67
RFA2	YNL312W	BIR1	P47134	954 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	SKI8	Q02793	397 aa	Predicted RBP	4.63	□□□□□ -1.67
RFA2	YNL312W	YPL077C	Q02831	240 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	FAR10	Q06001	478 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	IRC25	Q07951	179 aa		4.63	□□□□□ -1.67
RFA2	YNL312W	SKG6	P32900	734 aa	Predicted RBP	4.62	□□□□□ -1.67
RFA2	YNL312W	RPC37	P36121	282 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	YHR045W	P38775	560 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	BAT1	P38891	393 aa	Known RBP	4.62	□□□□□ -1.67
RFA2	YNL312W	SOP4	P39543	234 aa	Predicted RBP	4.62	□□□□□ -1.67
RFA2	YNL312W	VAB2	P40003	282 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	YNL208W	P40159	199 aa	Known RBP	4.62	□□□□□ -1.67
RFA2	YNL312W	SNM1	P40993	198 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	MRX5	P47007	382 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	AIM23	P47015	356 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	UBC13	P52490	153 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	TIM21	P53220	239 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	PRP38	Q00723	242 aa	Predicted RBP	4.62	□□□□□ -1.67
RFA2	YNL312W	SRL4	Q03085	281 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	ARV1	Q06541	321 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	GPN3	Q06543	272 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	RBD2	Q12270	262 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	ERP3	Q12403	225 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	PRM4	Q12498	284 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	NCB2	Q92317	146 aa		4.62	□□□□□ -1.67
RFA2	YNL312W	VPS13	Q07878	3144 aa		4.61	□□□□□ -1.67
RFA2	YNL312W	GIT1	P25346	518 aa		4.61	□□□□□ -1.67
RFA2	YNL312W	CWP1	P28319	239 aa		4.61	□□□□□ -1.67
RFA2	YNL312W	ARO4	P32449	370 aa	Known RBP	4.61	□□□□□ -1.67
RFA2	YNL312W	NUP2	P32499	720 aa		4.61	□□□□□ -1.67
RFA2	YNL312W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms