RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W YKR104WP0CE69 306 aa1.7□□□□□ -2.14
HSH155YMR288W AAT2P23542 418 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W IMG1P25626 169 aa1.7□□□□□ -2.14
HSH155YMR288W RAD14P28519 371 aa1.7□□□□□ -2.14
HSH155YMR288W SNC1P31109 117 aa1.7□□□□□ -2.14
HSH155YMR288W SIN4P32259 974 aa1.7□□□□□ -2.14
HSH155YMR288W SPS19P32573 292 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W MUD1P32605 298 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W PRP18P33411 251 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W VPS51P36116 164 aa1.7□□□□□ -2.14
HSH155YMR288W SPP381P38282 291 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W LAG1P38703 411 aa1.7□□□□□ -2.14
HSH155YMR288W ANS1P38832 159 aa1.7□□□□□ -2.14
HSH155YMR288W ALP1P38971 573 aa1.7□□□□□ -2.14
HSH155YMR288W SOP4P39543 234 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W YER137CP40083 148 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W YIL067CP40514 678 aa1.7□□□□□ -2.14
HSH155YMR288W YIL001WP40560 513 aa1.7□□□□□ -2.14
HSH155YMR288W HXT9P40885 567 aa1.7□□□□□ -2.14
HSH155YMR288W AZF1P41696 914 aa1.7□□□□□ -2.14
HSH155YMR288W GAB1P41733 394 aa1.7□□□□□ -2.14
HSH155YMR288W TES1P41903 349 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W RPS10BP46784 105 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W ATG27P46989 271 aa1.7□□□□□ -2.14
HSH155YMR288W YJL118WP47022 219 aa1.7□□□□□ -2.14
HSH155YMR288W ASN2P49090 572 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W NOP19P53317 196 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W HXT11P54862 567 aa1.7□□□□□ -2.14
HSH155YMR288W RSM23Q01163 450 aa1.7□□□□□ -2.14
HSH155YMR288W YMR254CQ04838 102 aa1.7□□□□□ -2.14
HSH155YMR288W ATG10Q07879 167 aa1.7□□□□□ -2.14
HSH155YMR288W RPS10AQ08745 105 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W DDC1Q08949 612 aa1.7□□□□□ -2.14
HSH155YMR288W AI5_BETAQ9ZZX0 354 aa1.7□□□□□ -2.14
HSH155YMR288W QCR7P00128 127 aa1.7□□□□□ -2.14
HSH155YMR288W YPT1P01123 206 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W PUT2P07275 575 aa1.7□□□□□ -2.14
HSH155YMR288W RPS16AP0CX51 143 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W RPS16BP0CX52 143 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W CBS2P14905 389 aa1.7□□□□□ -2.14
HSH155YMR288W YCR043CP25361 127 aa1.7□□□□□ -2.14
HSH155YMR288W CPR3P25719 182 aa1.7□□□□□ -2.14
HSH155YMR288W PAD1P33751 242 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
HSH155YMR288W YBR144CP34215 104 aa1.7□□□□□ -2.14
HSH155YMR288W SKT5P34226 696 aa1.7□□□□□ -2.14
HSH155YMR288W LDB7P38210 180 aa1.7□□□□□ -2.14
HSH155YMR288W SEC72P39742 193 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W ERG28P40030 148 aa1.7□□□□□ -2.14
HSH155YMR288W YIL152WP40455 235 aa1.7□□□□□ -2.14
HSH155YMR288W MRX5P47007 382 aa1.7□□□□□ -2.14
HSH155YMR288W SNX4P47057 423 aa1.7□□□□□ -2.14
HSH155YMR288W YJR056CP47115 236 aa1.7□□□□□ -2.14
HSH155YMR288W CWC23P52868 283 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W RRN9P53437 365 aa1.7□□□□□ -2.14
HSH155YMR288W SSU72P53538 206 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W SMM1P53720 384 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W CRZ1P53968 678 aa1.7□□□□□ -2.14
HSH155YMR288W SPP2Q02521 185 aa1.7□□□□□ -2.14
HSH155YMR288W YMR226CQ05016 267 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W DCR2Q05924 578 aa1.7□□□□□ -2.14
HSH155YMR288W YOR365CQ08844 703 aa1.7□□□□□ -2.14
HSH155YMR288W PER33Q12144 273 aa1.7□□□□□ -2.14
HSH155YMR288W PRP46Q12417 451 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W SEY1Q99287 776 aa1.7□□□□□ -2.14
HSH155YMR288W UBA3Q99344 299 aa1.7□□□□□ -2.14
HSH155YMR288W GDH1P07262 454 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W SNF6P18888 332 aa1.7□□□□□ -2.14
HSH155YMR288W NAM9P27929 486 aa1.7□□□□□ -2.14
HSH155YMR288W PPA2P28239 310 aa1.7□□□□□ -2.14
HSH155YMR288W SOL2P37262 315 aa1.7□□□□□ -2.14
HSH155YMR288W RPL32P38061 130 aaKnown RBP1.7□□□□□ -2.14
HSH155YMR288W BNA4P38169 460 aa1.7□□□□□ -2.14
HSH155YMR288W TSC10P38342 320 aa1.7□□□□□ -2.14
HSH155YMR288W BIG1P38813 335 aa1.7□□□□□ -2.14
HSH155YMR288W FET3P38993 636 aa1.7□□□□□ -2.14
HSH155YMR288W END3P39013 349 aa1.7□□□□□ -2.14
HSH155YMR288W CIN4P39110 191 aa1.7□□□□□ -2.14
HSH155YMR288W LCP5P40079 357 aaPredicted RBP1.7□□□□□ -2.14
HSH155YMR288W YKE4P40544 346 aa1.7□□□□□ -2.14
HSH155YMR288W HIT1P46973 164 aa1.7□□□□□ -2.14
HSH155YMR288W IBA57P47158 497 aa1.7□□□□□ -2.14
HSH155YMR288W ROG1P53118 685 aa1.7□□□□□ -2.14
HSH155YMR288W YIP3P53633 176 aa1.7□□□□□ -2.14
HSH155YMR288W YNL140CP53910 189 aa1.7□□□□□ -2.14
HSH155YMR288W VPS74Q06385 345 aa1.7□□□□□ -2.14
HSH155YMR288W NDE2Q07500 545 aa1.7□□□□□ -2.14
HSH155YMR288W PLB3Q08108 686 aa1.7□□□□□ -2.14
HSH155YMR288W BLM10P43583 2143 aa1.69□□□□□ -2.14
HSH155YMR288W THP2O13539 261 aaKnown RBP1.69□□□□□ -2.14
HSH155YMR288W SCEIP03882 235 aa1.69□□□□□ -2.14
HSH155YMR288W PAB1P04147 577 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
HSH155YMR288W RAD1P06777 1100 aa1.69□□□□□ -2.14
HSH155YMR288W NHP6BP11633 99 aaKnown RBP1.69□□□□□ -2.14
HSH155YMR288W GPI12P23797 304 aa1.69□□□□□ -2.14
HSH155YMR288W UBC8P28263 218 aa1.69□□□□□ -2.14
HSH155YMR288W VMA6P32366 345 aaKnown RBP1.69□□□□□ -2.14
HSH155YMR288W PHD1P36093 366 aa1.69□□□□□ -2.14
HSH155YMR288W BMT2P38278 337 aa1.69□□□□□ -2.14
HSH155YMR288W PHO90P39535 881 aa1.69□□□□□ -2.14
HSH155YMR288W YER130CP39959 443 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms