RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	SPO19	Q03029	223 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	NUP53	Q03790	475 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	VPS20	Q04272	221 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	PLB3	Q08108	686 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	GRE1	Q08969	168 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	TY1B-H	O13535	1793 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	RPO31	P04051	1460 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	HEM15	P16622	393 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	PCL1	P24867	279 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	PEP1	P32319	1579 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	ARO4	P32449	370 aa	Known RBP	1.11	□□□□□ -2.23
YCS4	YLR272C	STH1	P32597	1359 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	RTR1	P40084	226 aa	Predicted RBP	1.11	□□□□□ -2.23
YCS4	YLR272C	DIM1	P41819	318 aa	Known RBP	1.11	□□□□□ -2.23
YCS4	YLR272C	AIM23	P47015	356 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	NIF3	P53081	288 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	MNT4	P53745	580 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	ECM5	Q03214	1411 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	MRX8	Q05473	314 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	KAP95	Q06142	861 aa	Known RBP	1.11	□□□□□ -2.23
YCS4	YLR272C	SFH1	Q06168	426 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	LOT6	Q07923	191 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	GPM2	Q12008	311 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	RFM1	Q12192	310 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	EMP46	Q12396	444 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	YNL162W-A	Q3E7A8	72 aa		1.11	□□□□□ -2.23
YCS4	YLR272C	MSI1	P13712	422 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	AST1	P35183	429 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	MIG3	P39943	394 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	HAT2	P39984	401 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	SIM1	P40472	476 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	AVT7	P40501	490 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	RRT5	P43607	289 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	LOH1	P47055	219 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	ARK1	P53974	638 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	GOT1	Q03554	138 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	CCH1	P50077	2039 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	ATG2	P53855	1592 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	MDS3	P53094	1487 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	YEL009C-A	A0A023PZF2	135 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	RPS28B	P0C0X0	67 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	TFS1	P14306	219 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	AAT2	P23542	418 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	RFT1	P38206	574 aa	Predicted RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YHR035W	P38769	630 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	PET8	P38921	284 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	AST2	P39945	430 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YGL262W	P53054	175 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	SLI1	P53304	468 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	CUS2	P53830	285 aa	Predicted RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	SLG1	P54867	378 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	PPT2	Q12036	173 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YHR214C-E	Q8TGK0	99 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	YOR1	P53049	1477 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	HTB1	P02293	131 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	HTB2	P02294	131 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	RPL12A	P0CX53	165 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	RPL12B	P0CX54	165 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	MRPL25	P23369	157 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	RNA15	P25299	296 aa	Predicted RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	LOS1	P33418	1100 aa	Predicted RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	PRY2	P36110	329 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	YHB1	P39676	399 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	THO1	P40040	218 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	RPL10	P41805	221 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	VMA13	P41807	478 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	ADO1	P47143	340 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YJR154W	P47181	346 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	YGL039W	P53183	348 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	MAL13	P53338	473 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	BOR1	P53838	576 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	ATG38	Q05789	226 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YPR098C	Q06089	161 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	ETT1	Q08421	412 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	ATP16	Q12165	160 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	NCE102	Q12207	173 aa	RIP-Chip data	1.1	□□□□□ -2.23	not detected
YCS4	YLR272C	RUP1	Q12242	671 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	TPT1	Q12272	230 aa	Known RBP	1.1	□□□□□ -2.23
YCS4	YLR272C	YBL008W-A	Q3E821	79 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	PDR10	P51533	1564 aa		1.1	□□□□□ -2.23
YCS4	YLR272C	YPR170W-B	P0C5R9	85 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	GIT1	P25346	518 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	ZIP1	P31111	875 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	SPO23	P33757	523 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	SCC4	P40090	624 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	YJL016W	P47072	561 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	LSG1	P53145	640 aa	Known RBP	1.09	□□□□□ -2.23
YCS4	YLR272C	CLD1	P53264	445 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	ERV41	Q04651	352 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	YPR011C	Q12251	326 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	BI3	Q9ZZW7	517 aa		1.09	□□□□□ -2.23
YCS4	YLR272C	TOP2	P06786	1428 aa	Known RBP	1.09	□□□□□ -2.23
YCS4	YLR272C	POL30	P15873	258 aa	Known RBP	1.09	□□□□□ -2.24
YCS4	YLR272C	ILV6	P25605	309 aa	Known RBP	1.09	□□□□□ -2.24
YCS4	YLR272C	GPI18	P38211	433 aa		1.09	□□□□□ -2.24
YCS4	YLR272C	TAE1	P38340	232 aa		1.09	□□□□□ -2.24
YCS4	YLR272C	CUE1	P38428	203 aa		1.09	□□□□□ -2.24
YCS4	YLR272C	YAP3	P38749	330 aa		1.09	□□□□□ -2.24
YCS4	YLR272C	SEO1	P39709	593 aa		1.09	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 141.1 ms