RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W SED5Q01590 340 aa1.29□□□□□ -2.2
HIT1YJR055W UTP15Q04305 513 aaKnown RBP1.29□□□□□ -2.2
HIT1YJR055W DBP9Q06218 594 aaKnown RBP1.29□□□□□ -2.2
HIT1YJR055W FLO11P08640 1367 aa1.29□□□□□ -2.2
HIT1YJR055W PMD1P32634 1753 aa1.29□□□□□ -2.2
HIT1YJR055W SEN1Q00416 2231 aaKnown RBP1.28□□□□□ -2.2
HIT1YJR055W ERD1P16151 362 aa1.28□□□□□ -2.2
HIT1YJR055W RBK1P25332 333 aa1.28□□□□□ -2.2
HIT1YJR055W PMT2P31382 759 aa1.28□□□□□ -2.2
HIT1YJR055W ALK2P32789 676 aaPredicted RBP1.28□□□□□ -2.2
HIT1YJR055W VAM7P32912 316 aa1.28□□□□□ -2.2
HIT1YJR055W MRPS5P33759 307 aa1.28□□□□□ -2.2
HIT1YJR055W GGC1P38988 300 aa1.28□□□□□ -2.2
HIT1YJR055W YJR054WP47114 497 aa1.28□□□□□ -2.2
HIT1YJR055W UTP6Q02354 440 aaKnown RBP1.28□□□□□ -2.2
HIT1YJR055W TRM82Q03774 444 aa1.28□□□□□ -2.2
HIT1YJR055W SPH1Q06160 661 aa1.28□□□□□ -2.2
HIT1YJR055W NOP6Q07623 225 aaKnown RBP1.28□□□□□ -2.2
HIT1YJR055W PML1Q07930 204 aaPredicted RBP1.28□□□□□ -2.2
HIT1YJR055W YOL029CQ08187 201 aa1.28□□□□□ -2.2
HIT1YJR055W FRE8Q12209 686 aa1.28□□□□□ -2.2
HIT1YJR055W SPO24Q3E752 67 aa1.28□□□□□ -2.2
HIT1YJR055W YLR419WQ06698 1435 aaKnown RBP1.28□□□□□ -2.2
HIT1YJR055W UTP10P42945 1769 aaKnown RBP1.27□□□□□ -2.21
HIT1YJR055W UTR1P21373 530 aa1.27□□□□□ -2.21
HIT1YJR055W TKL2P33315 681 aa1.27□□□□□ -2.21
HIT1YJR055W ADH5P38113 351 aaKnown RBP1.27□□□□□ -2.21
HIT1YJR055W IST2P38250 946 aa1.27□□□□□ -2.21
HIT1YJR055W SIF2P38262 535 aa1.27□□□□□ -2.21
HIT1YJR055W TAE1P38340 232 aa1.27□□□□□ -2.21
HIT1YJR055W SHC1P39000 512 aa1.27□□□□□ -2.21
HIT1YJR055W POP2P39008 433 aa1.27□□□□□ -2.21
HIT1YJR055W END3P39013 349 aa1.27□□□□□ -2.21
HIT1YJR055W CAJ1P39101 391 aa1.27□□□□□ -2.21
HIT1YJR055W BDH1P39714 382 aa1.27□□□□□ -2.21
HIT1YJR055W LCP5P40079 357 aaPredicted RBP1.27□□□□□ -2.21
HIT1YJR055W YIL054WP40524 105 aa1.27□□□□□ -2.21
HIT1YJR055W YFR018CP43599 363 aa1.27□□□□□ -2.21
HIT1YJR055W FYV8P46949 817 aaKnown RBP1.27□□□□□ -2.21
HIT1YJR055W ASG7P46993 209 aa1.27□□□□□ -2.21
HIT1YJR055W YGR168CP53293 376 aa1.27□□□□□ -2.21
HIT1YJR055W INP1Q03694 420 aa1.27□□□□□ -2.21
HIT1YJR055W API2Q04413 109 aa1.27□□□□□ -2.21
HIT1YJR055W MMT2Q08970 484 aa1.27□□□□□ -2.21
HIT1YJR055W SAM4Q08985 325 aaKnown RBP1.27□□□□□ -2.21
HIT1YJR055W YDL211CQ12121 372 aa1.27□□□□□ -2.21
HIT1YJR055W TFC7Q12415 435 aa1.27□□□□□ -2.21
HIT1YJR055W AIM45Q12480 344 aaKnown RBP1.27□□□□□ -2.21
HIT1YJR055W ADE6P38972 1358 aaKnown RBP1.26□□□□□ -2.21
HIT1YJR055W VPS63O13549 108 aa1.26□□□□□ -2.21
HIT1YJR055W RNR2P09938 399 aaKnown RBP1.26□□□□□ -2.21
HIT1YJR055W RPL40AP0CH08 128 aaKnown RBP1.26□□□□□ -2.21
HIT1YJR055W RPL40BP0CH09 128 aaKnown RBP1.26□□□□□ -2.21
HIT1YJR055W COX10P21592 462 aa1.26□□□□□ -2.21
HIT1YJR055W GRR1P24814 1151 aa1.26□□□□□ -2.21
HIT1YJR055W POT1P27796 417 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
HIT1YJR055W ICL1P28240 557 aaPredicted RBP1.26□□□□□ -2.21
HIT1YJR055W YPS1P32329 569 aa1.26□□□□□ -2.21
HIT1YJR055W ATG12P38316 186 aa1.26□□□□□ -2.21
HIT1YJR055W MMS21P38632 267 aa1.26□□□□□ -2.21
HIT1YJR055W YMR134WP40207 237 aa1.26□□□□□ -2.21
HIT1YJR055W NAS6P50086 228 aa1.26□□□□□ -2.21
HIT1YJR055W RVB1Q03940 463 aaKnown RBP1.26□□□□□ -2.21
HIT1YJR055W YDR286CQ05530 114 aa1.26□□□□□ -2.21
HIT1YJR055W YPR078CQ06813 372 aa1.26□□□□□ -2.21
HIT1YJR055W HKR1P41809 1802 aa1.26□□□□□ -2.21
HIT1YJR055W FLO1P32768 1537 aa1.25□□□□□ -2.21
HIT1YJR055W RAD1P06777 1100 aa1.25□□□□□ -2.21
HIT1YJR055W RPL18AP0CX49 186 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W RPL18BP0CX50 186 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W RPS16AP0CX51 143 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W RPS16BP0CX52 143 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W FAR1P21268 830 aa1.25□□□□□ -2.21
HIT1YJR055W INO2P26798 304 aa1.25□□□□□ -2.21
HIT1YJR055W ERG9P29704 444 aa1.25□□□□□ -2.21
HIT1YJR055W ACB1P31787 87 aa1.25□□□□□ -2.21
HIT1YJR055W YEL043WP32618 956 aa1.25□□□□□ -2.21
HIT1YJR055W ZRT1P32804 376 aa1.25□□□□□ -2.21
HIT1YJR055W EFM1P38732 585 aa1.25□□□□□ -2.21
HIT1YJR055W BTT1P40314 149 aaPredicted RBP1.25□□□□□ -2.21
HIT1YJR055W EFM3P47163 339 aa1.25□□□□□ -2.21
HIT1YJR055W TAF6P53040 516 aa1.25□□□□□ -2.21
HIT1YJR055W YGL118CP53132 145 aa1.25□□□□□ -2.21
HIT1YJR055W LSG1P53145 640 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W FMP48P53233 369 aa1.25□□□□□ -2.21
HIT1YJR055W PXR1P53335 271 aaPredicted RBP1.25□□□□□ -2.21
HIT1YJR055W RGM1Q00453 211 aa1.25□□□□□ -2.21
HIT1YJR055W IRC4Q03036 179 aa1.25□□□□□ -2.21
HIT1YJR055W MIX17Q03667 156 aa1.25□□□□□ -2.21
HIT1YJR055W CSM3Q04659 317 aa1.25□□□□□ -2.21
HIT1YJR055W YLR297WQ05899 129 aa1.25□□□□□ -2.21
HIT1YJR055W DTD1Q07648 150 aaKnown RBP1.25□□□□□ -2.21
HIT1YJR055W ALE1Q08548 619 aa1.25□□□□□ -2.21
HIT1YJR055W SLM3Q12093 417 aa1.25□□□□□ -2.21
HIT1YJR055W PSY3Q12318 242 aa1.25□□□□□ -2.21
HIT1YJR055W YPR1Q12458 312 aa1.25□□□□□ -2.21
HIT1YJR055W BEM2P39960 2167 aaKnown RBP1.24□□□□□ -2.21
HIT1YJR055W GAL3P13045 520 aa1.24□□□□□ -2.21
HIT1YJR055W SPS100P13130 326 aa1.24□□□□□ -2.21
HIT1YJR055W CUP2P15315 225 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms