RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W UGA1P17649 471 aa2.87□□□□□ -1.95
PRP18YGR006W RPL16BP26785 198 aaKnown RBP2.87□□□□□ -1.95
PRP18YGR006W ZRT3P34240 503 aa2.87□□□□□ -1.95
PRP18YGR006W FRM2P37261 193 aa2.87□□□□□ -1.95
PRP18YGR006W HSM3P38348 480 aa2.87□□□□□ -1.95
PRP18YGR006W TRR2P38816 342 aa2.87□□□□□ -1.95
PRP18YGR006W SPT8P38915 602 aa2.87□□□□□ -1.95
PRP18YGR006W FRT2P39734 528 aa2.87□□□□□ -1.95
PRP18YGR006W SLM1P40485 686 aa2.87□□□□□ -1.95
PRP18YGR006W NUP84P52891 726 aa2.87□□□□□ -1.95
PRP18YGR006W EGD1Q02642 157 aaKnown RBP2.87□□□□□ -1.95
PRP18YGR006W RNY1Q02933 434 aaKnown RBP2.87□□□□□ -1.95
PRP18YGR006W YMR244WQ04018 355 aa2.87□□□□□ -1.95
PRP18YGR006W YLR446WQ06204 433 aa2.87□□□□□ -1.95
PRP18YGR006W CLP1Q08685 445 aaPredicted RBP2.87□□□□□ -1.95
PRP18YGR006W DFM1Q12743 341 aaKnown RBP2.87□□□□□ -1.95
PRP18YGR006W LAG2Q92325 660 aa2.87□□□□□ -1.95
PRP18YGR006W TDH3P00359 332 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PRP18YGR006W MER1P16523 270 aa2.86□□□□□ -1.95
PRP18YGR006W DBP3P20447 523 aaKnown RBP2.86□□□□□ -1.95
PRP18YGR006W COX10P21592 462 aa2.86□□□□□ -1.95
PRP18YGR006W SKG6P32900 734 aaPredicted RBP2.86□□□□□ -1.95
PRP18YGR006W UBC13P52490 153 aa2.86□□□□□ -1.95
PRP18YGR006W PNC1P53184 216 aaKnown RBP2.86□□□□□ -1.95
PRP18YGR006W HST4P53688 370 aa2.86□□□□□ -1.95
PRP18YGR006W ERV41Q04651 352 aa2.86□□□□□ -1.95
PRP18YGR006W BCP1Q06338 283 aa2.86□□□□□ -1.95
PRP18YGR006W DIB1Q06819 143 aaPredicted RBP2.86□□□□□ -1.95
PRP18YGR006W RRP42Q12277 265 aaPredicted RBP2.86□□□□□ -1.95
PRP18YGR006W TRM10Q12400 293 aa2.86□□□□□ -1.95
PRP18YGR006W FAB1P34756 2278 aa2.85□□□□□ -1.95
PRP18YGR006W RPL31AP0C2H8 113 aaKnown RBP2.85□□□□□ -1.95
PRP18YGR006W MRPL25P23369 157 aa2.85□□□□□ -1.95
PRP18YGR006W NTG1P31378 399 aa2.85□□□□□ -1.95
PRP18YGR006W YUH1P35127 236 aa2.85□□□□□ -1.95
PRP18YGR006W BDH1P39714 382 aa2.85□□□□□ -1.95
PRP18YGR006W YIR035CP40579 254 aa2.85□□□□□ -1.95
PRP18YGR006W YNL260CP53846 198 aa2.85□□□□□ -1.95
PRP18YGR006W YPL077CQ02831 240 aa2.85□□□□□ -1.95
PRP18YGR006W ECM18Q04623 453 aa2.85□□□□□ -1.95
PRP18YGR006W ECM19Q06011 112 aa2.85□□□□□ -1.95
PRP18YGR006W YLR413WQ06689 675 aa2.85□□□□□ -1.95
PRP18YGR006W TFC7Q12415 435 aa2.85□□□□□ -1.95
PRP18YGR006W HPR1P17629 752 aaKnown RBP2.84□□□□□ -1.95
PRP18YGR006W GPI12P23797 304 aa2.84□□□□□ -1.95
PRP18YGR006W TPS2P31688 896 aaKnown RBP2.84□□□□□ -1.95
PRP18YGR006W VPH2P32341 215 aa2.84□□□□□ -1.95
PRP18YGR006W CAB3P36076 571 aa2.84□□□□□ -1.95
PRP18YGR006W TDA11P38854 504 aa2.84□□□□□ -1.95
PRP18YGR006W SMC2P38989 1170 aaKnown RBP2.84□□□□□ -1.95
PRP18YGR006W GTO1P48239 356 aa2.84□□□□□ -1.95
PRP18YGR006W YGL118CP53132 145 aa2.84□□□□□ -1.95
PRP18YGR006W YOR292CQ08743 309 aa2.84□□□□□ -1.95
PRP18YGR006W YDL211CQ12121 372 aa2.84□□□□□ -1.95
PRP18YGR006W GAL7P08431 366 aa2.83□□□□□ -1.96
PRP18YGR006W CUP2P15315 225 aa2.83□□□□□ -1.96
PRP18YGR006W CSM1P25651 190 aa2.83□□□□□ -1.96
PRP18YGR006W FMT1P32785 401 aa2.83□□□□□ -1.96
PRP18YGR006W MRPL6P32904 214 aa2.83□□□□□ -1.96
PRP18YGR006W COY1P34237 679 aa2.83□□□□□ -1.96
PRP18YGR006W YKL063CP35725 167 aa2.83□□□□□ -1.96
PRP18YGR006W YPC1P38298 316 aa2.83□□□□□ -1.96
PRP18YGR006W GCD14P46959 383 aaPredicted RBP2.83□□□□□ -1.96
PRP18YGR006W RAD17P48581 401 aa2.83□□□□□ -1.96
PRP18YGR006W RPN14P53196 417 aa2.83□□□□□ -1.96
PRP18YGR006W SMD1Q02260 146 aaPredicted RBP2.83□□□□□ -1.96
PRP18YGR006W SEC13Q04491 297 aaKnown RBP2.83□□□□□ -1.96
PRP18YGR006W ATG38Q05789 226 aaKnown RBP2.83□□□□□ -1.96
PRP18YGR006W BER1Q06688 274 aaKnown RBP2.83□□□□□ -1.96
PRP18YGR006W RRT8Q08219 342 aa2.83□□□□□ -1.96
PRP18YGR006W RUD3Q12234 484 aaKnown RBP2.83□□□□□ -1.96
PRP18YGR006W ERP3Q12403 225 aa2.83□□□□□ -1.96
PRP18YGR006W YPR064WQ12492 139 aa2.83□□□□□ -1.96
PRP18YGR006W ATP6P00854 259 aa2.82□□□□□ -1.96
PRP18YGR006W CPT1P17898 393 aa2.82□□□□□ -1.96
PRP18YGR006W RPB4P20433 221 aaPredicted RBP2.82□□□□□ -1.96
PRP18YGR006W GCG1P32656 232 aaKnown RBP2.82□□□□□ -1.96
PRP18YGR006W CDC13P32797 924 aaKnown RBP2.82□□□□□ -1.96
PRP18YGR006W IMP3P32899 183 aaPredicted RBP2.82□□□□□ -1.96
PRP18YGR006W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
PRP18YGR006W TPO5P36029 618 aa2.82□□□□□ -1.96
PRP18YGR006W RPC37P36121 282 aa2.82□□□□□ -1.96
PRP18YGR006W AIM29P36154 155 aa2.82□□□□□ -1.96
PRP18YGR006W HIS2P38635 335 aa2.82□□□□□ -1.96
PRP18YGR006W ASP1P38986 381 aaPredicted RBP2.82□□□□□ -1.96
PRP18YGR006W YER034WP40022 185 aaKnown RBP2.82□□□□□ -1.96
PRP18YGR006W GDS1P41913 522 aa2.82□□□□□ -1.96
PRP18YGR006W AGP3P43548 558 aa2.82□□□□□ -1.96
PRP18YGR006W CAX4P53223 239 aa2.82□□□□□ -1.96
PRP18YGR006W LSB1P53281 241 aa2.82□□□□□ -1.96
PRP18YGR006W GPN3Q06543 272 aa2.82□□□□□ -1.96
PRP18YGR006W ASR1Q06834 288 aa2.82□□□□□ -1.96
PRP18YGR006W MRPL23Q12487 163 aaPredicted RBP2.82□□□□□ -1.96
PRP18YGR006W MEK1P24719 497 aaPredicted RBP2.81□□□□□ -1.96
PRP18YGR006W RPB9P27999 122 aa2.81□□□□□ -1.96
PRP18YGR006W ARC19P33204 171 aaKnown RBP2.81□□□□□ -1.96
PRP18YGR006W CSE1P33307 960 aa2.81□□□□□ -1.96
PRP18YGR006W GPX1P36014 167 aa2.81□□□□□ -1.96
PRP18YGR006W PEX18P38855 283 aa2.81□□□□□ -1.96
PRP18YGR006W EDC2P40023 145 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 247.4 ms