RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	ALG11	P53954	548 aa	Known RBP	4.12	□□□□□ -1.75
SKI8	YGL213C	VBA1	Q04301	562 aa		4.12	□□□□□ -1.75
SKI8	YGL213C	GMC1	Q04399	608 aa		4.12	□□□□□ -1.75
SKI8	YGL213C	ADH6	Q04894	360 aa	Known RBP	4.12	□□□□□ -1.75
SKI8	YGL213C	TAZ1	Q06510	381 aa		4.12	□□□□□ -1.75
SKI8	YGL213C	HIS1	P00498	297 aa	Known RBP	4.11	□□□□□ -1.75
SKI8	YGL213C	ASP3-2	P0CX77	362 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	ASP3-3	P0CX78	362 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	ASP3-4	P0CX79	362 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	ASP3-1	P0CZ17	362 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	CDC42	P19073	191 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	IFM1	P25038	676 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	SPT4	P32914	102 aa	Predicted RBP	4.11	□□□□□ -1.75
SKI8	YGL213C	GPI18	P38211	433 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	TAD2	P47058	250 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	TIS11	P47977	285 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	PET117	Q02771	107 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	ADD37	Q03233	198 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	BOP2	Q06150	570 aa		4.11	□□□□□ -1.75
SKI8	YGL213C	RRT12	P25381	491 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	YEL045C	P32616	141 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	CSE1	P33307	960 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	SDT1	P53078	280 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	YNR066C	P53752	436 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	RMI1	Q02685	241 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	RPL21A	Q02753	160 aa	Known RBP	4.1	□□□□□ -1.75
SKI8	YGL213C	OST6	Q03723	332 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	PEX30	Q06169	523 aa		4.1	□□□□□ -1.75
SKI8	YGL213C	COX4	P04037	155 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	MRPL6	P32904	214 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	SHE3	P38272	425 aa	Known RBP	4.09	□□□□□ -1.75
SKI8	YGL213C	HSM3	P38348	480 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	EFM1	P38732	585 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	FMC1	P40491	155 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	YPT32	P51996	222 aa	Known RBP	4.09	□□□□□ -1.75
SKI8	YGL213C	SDS23	P53172	527 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	DPP1	Q05521	289 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	MIM1	Q08176	113 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	VIK1	Q12045	647 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	PER33	Q12144	273 aa		4.09	□□□□□ -1.75
SKI8	YGL213C	FOL3	Q12676	427 aa	Predicted RBP	4.09	□□□□□ -1.75
SKI8	YGL213C	ARO4	P32449	370 aa	Known RBP	4.08	□□□□□ -1.76
SKI8	YGL213C	YKL187C	P34231	750 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SKI8	YGL213C	SDS24	P38314	527 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	BIG1	P38813	335 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	GGC1	P38988	300 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	VEL1	P53058	206 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	PEX31	P53203	462 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	SRL4	Q03085	281 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	YOR029W	Q12243	111 aa		4.08	□□□□□ -1.76
SKI8	YGL213C	CFT1	Q06632	1357 aa	Known RBP	4.07	□□□□□ -1.76
SKI8	YGL213C	POF1	P25576	258 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	YCR016W	P25617	290 aa	Known RBP	4.07	□□□□□ -1.76
SKI8	YGL213C	CDC13	P32797	924 aa	Known RBP	4.07	□□□□□ -1.76
SKI8	YGL213C	CYM1	P32898	989 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	TCD1	P38756	429 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	DDI1	P40087	428 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	KTR6	P54070	446 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	TPS1	Q00764	495 aa	Known RBP	4.07	□□□□□ -1.76
SKI8	YGL213C	INP2	Q03824	705 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	SFH1	Q06168	426 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	CTR3	Q06686	241 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	SGT2	Q12118	346 aa	Known RBP	4.07	□□□□□ -1.76
SKI8	YGL213C	YBL111C	Q3E7Y5	667 aa		4.07	□□□□□ -1.76
SKI8	YGL213C	EPT1	P22140	391 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	PRS1	P32895	427 aa	Known RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	MSN4	P33749	630 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	PRS4	P38063	326 aa	Predicted RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	RFT1	P38206	574 aa	Predicted RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	YGL039W	P53183	348 aa	Known RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	TIM21	P53220	239 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	MRPL50	P53724	139 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	YNL040W	P53960	456 aa	Predicted RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	CWC21	Q03375	135 aa	Known RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	GRX3	Q03835	250 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	TAF9	Q05027	157 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	PAM18	Q07914	168 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	SDO1	Q07953	250 aa	Known RBP	4.06	□□□□□ -1.76
SKI8	YGL213C	YOR292C	Q08743	309 aa		4.06	□□□□□ -1.76
SKI8	YGL213C	NTG1	P31378	399 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	SRB4	P32569	687 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	SPS19	P32573	292 aa	Known RBP	4.05	□□□□□ -1.76
SKI8	YGL213C	SUA5	P32579	426 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	YBR062C	P38239	180 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	VAB2	P40003	282 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	FMP48	P53233	369 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	CDC14	Q00684	551 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	MRPS16	Q02608	121 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	API2	Q04413	109 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	SEC13	Q04491	297 aa	Known RBP	4.05	□□□□□ -1.76
SKI8	YGL213C	SCW10	Q04951	389 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	TMC1	Q08422	150 aa	Predicted RBP	4.05	□□□□□ -1.76
SKI8	YGL213C	YOR114W	Q12219	294 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	ATG31	Q12421	196 aa		4.05	□□□□□ -1.76
SKI8	YGL213C	AEP1	P32493	518 aa		4.04	□□□□□ -1.76
SKI8	YGL213C	GPX1	P36014	167 aa		4.04	□□□□□ -1.76
SKI8	YGL213C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	RIP-Chip
SKI8	YGL213C	NPT1	P39683	429 aa	Known RBP	4.04	□□□□□ -1.76
SKI8	YGL213C	YGL262W	P53054	175 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms