RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W SEC13Q04491 297 aaKnown RBP6.5□□□□□ -1.37
SNF4YGL115W YMR252CQ04814 134 aa6.5□□□□□ -1.37
SNF4YGL115W SPR28Q04921 423 aa6.5□□□□□ -1.37
SNF4YGL115W EAF1Q06337 982 aa6.5□□□□□ -1.37
SNF4YGL115W CDA2Q06703 312 aa6.5□□□□□ -1.37
SNF4YGL115W REX4Q08237 289 aa6.5□□□□□ -1.37
SNF4YGL115W YOR385WQ08909 290 aa6.5□□□□□ -1.37
SNF4YGL115W RTC5Q12108 567 aaKnown RBP6.5□□□□□ -1.37
SNF4YGL115W LYS21Q12122 440 aaKnown RBP6.5□□□□□ -1.37
SNF4YGL115W YDR524C-BQ3E6R4 66 aa6.5□□□□□ -1.37
SNF4YGL115W ARO3P14843 370 aaKnown RBP6.49□□□□□ -1.37
SNF4YGL115W APA2P22108 325 aa6.49□□□□□ -1.37
SNF4YGL115W NTH1P32356 751 aa6.49□□□□□ -1.37
SNF4YGL115W SUA5P32579 426 aa6.49□□□□□ -1.37
SNF4YGL115W MGM101P32787 269 aaKnown RBP6.49□□□□□ -1.37
SNF4YGL115W SFK1P35735 353 aa6.49□□□□□ -1.37
SNF4YGL115W YKL162CP36052 402 aa6.49□□□□□ -1.37
SNF4YGL115W BNA4P38169 460 aa6.49□□□□□ -1.37
SNF4YGL115W GCV3P39726 170 aaPredicted RBP6.49□□□□□ -1.37
SNF4YGL115W UTP25P40498 721 aaKnown RBP6.49□□□□□ -1.37
SNF4YGL115W SNN1P48232 102 aa6.49□□□□□ -1.37
SNF4YGL115W RAD17P48581 401 aa6.49□□□□□ -1.37
SNF4YGL115W RHO4Q00246 291 aa6.49□□□□□ -1.37
SNF4YGL115W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
SNF4YGL115W YKR011CQ02209 353 aa6.49□□□□□ -1.37
SNF4YGL115W PCC1Q3E833 88 aa6.49□□□□□ -1.37
SNF4YGL115W HOM3P10869 527 aa6.48□□□□□ -1.37
SNF4YGL115W STE50P25344 346 aa6.48□□□□□ -1.37
SNF4YGL115W YCR100CP25606 316 aa6.48□□□□□ -1.37
SNF4YGL115W SSH4P32343 579 aa6.48□□□□□ -1.37
SNF4YGL115W ORC2P32833 620 aa6.48□□□□□ -1.37
SNF4YGL115W PXA2P34230 853 aa6.48□□□□□ -1.37
SNF4YGL115W DOA1P36037 715 aa6.48□□□□□ -1.37
SNF4YGL115W FLO10P36170 1169 aa6.48□□□□□ -1.37
SNF4YGL115W MNT3P40549 630 aa6.48□□□□□ -1.37
SNF4YGL115W AZF1P41696 914 aa6.48□□□□□ -1.37
SNF4YGL115W MRX5P47007 382 aa6.48□□□□□ -1.37
SNF4YGL115W PHO23P50947 330 aa6.48□□□□□ -1.37
SNF4YGL115W EMC4P53073 190 aa6.48□□□□□ -1.37
SNF4YGL115W YGR026WP53217 278 aa6.48□□□□□ -1.37
SNF4YGL115W NRK1P53915 240 aa6.48□□□□□ -1.37
SNF4YGL115W MSC1Q03104 513 aa6.48□□□□□ -1.37
SNF4YGL115W BNA7Q04066 261 aa6.48□□□□□ -1.37
SNF4YGL115W CAC2Q04199 468 aa6.48□□□□□ -1.37
SNF4YGL115W GRC3Q07845 632 aa6.48□□□□□ -1.37
SNF4YGL115W CRT10Q08226 957 aa6.48□□□□□ -1.37
SNF4YGL115W ZEO1Q08245 113 aa6.48□□□□□ -1.37
SNF4YGL115W TMS1Q12116 473 aa6.48□□□□□ -1.37
SNF4YGL115W PDH1Q12428 516 aaKnown RBP6.48□□□□□ -1.37
SNF4YGL115W AHC1Q12433 566 aa6.48□□□□□ -1.37
SNF4YGL115W RRI1Q12468 440 aa6.48□□□□□ -1.37
SNF4YGL115W PRM4Q12498 284 aa6.48□□□□□ -1.37
SNF4YGL115W VMA9Q3E7B6 73 aa6.48□□□□□ -1.37
SNF4YGL115W YKL033W-AQ86ZR7 236 aa6.48□□□□□ -1.37
SNF4YGL115W CBS1P14066 229 aa6.47□□□□□ -1.37
SNF4YGL115W MCK1P21965 375 aaKnown RBP6.47□□□□□ -1.37
SNF4YGL115W PDE1P22434 369 aa6.47□□□□□ -1.37
SNF4YGL115W PUT3P25502 979 aaPredicted RBP6.47□□□□□ -1.37
SNF4YGL115W FUN19P28003 413 aaPredicted RBP6.47□□□□□ -1.37
SNF4YGL115W MCM10P32354 571 aa6.47□□□□□ -1.37
SNF4YGL115W MRP20P32387 263 aa6.47□□□□□ -1.37
SNF4YGL115W YKL077WP36081 392 aa6.47□□□□□ -1.37
SNF4YGL115W YPC1P38298 316 aa6.47□□□□□ -1.37
SNF4YGL115W MTC4P38335 694 aaKnown RBP6.47□□□□□ -1.37
SNF4YGL115W ARO9P38840 513 aaPredicted RBP6.47□□□□□ -1.37
SNF4YGL115W ASP1P38986 381 aaPredicted RBP6.47□□□□□ -1.37
SNF4YGL115W SMB1P40018 196 aaKnown RBP6.47□□□□□ -1.37
SNF4YGL115W PGD1P40356 397 aa6.47□□□□□ -1.37
SNF4YGL115W SDP1P40479 209 aa6.47□□□□□ -1.37
SNF4YGL115W ALK1P43633 760 aaKnown RBP6.47□□□□□ -1.37
SNF4YGL115W YGL159WP53110 370 aa6.47□□□□□ -1.37
SNF4YGL115W FYV6P53913 173 aa6.47□□□□□ -1.37
SNF4YGL115W YMR279CQ03263 540 aa6.47□□□□□ -1.37
SNF4YGL115W CYK3Q07533 885 aa6.47□□□□□ -1.37
SNF4YGL115W SUL2Q12325 893 aa6.47□□□□□ -1.37
SNF4YGL115W CMC2Q3E7A4 109 aa6.47□□□□□ -1.37
SNF4YGL115W HBN1Q96VH4 193 aa6.47□□□□□ -1.37
SNF4YGL115W CYC7P00045 113 aa6.46□□□□□ -1.38
SNF4YGL115W REV1P12689 985 aa6.46□□□□□ -1.38
SNF4YGL115W CWH43P25618 953 aa6.46□□□□□ -1.38
SNF4YGL115W ERG24P32462 438 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W YEF1P32622 495 aa6.46□□□□□ -1.38
SNF4YGL115W ARC19P33204 171 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W RRN10P38204 145 aa6.46□□□□□ -1.38
SNF4YGL115W IMD2P38697 523 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W BFR1P38934 470 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
SNF4YGL115W POG1P40473 351 aa6.46□□□□□ -1.38
SNF4YGL115W IBA57P47158 497 aa6.46□□□□□ -1.38
SNF4YGL115W SRB7P47822 140 aa6.46□□□□□ -1.38
SNF4YGL115W YGL235WP53071 178 aa6.46□□□□□ -1.38
SNF4YGL115W YGL204CP53089 101 aa6.46□□□□□ -1.38
SNF4YGL115W VHT1P53241 593 aa6.46□□□□□ -1.38
SNF4YGL115W CTL1Q03220 320 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W VBA4Q04602 768 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W YEH1Q07804 573 aa6.46□□□□□ -1.38
SNF4YGL115W SDO1Q07953 250 aaKnown RBP6.46□□□□□ -1.38
SNF4YGL115W XYL2Q07993 356 aa6.46□□□□□ -1.38
SNF4YGL115W YDL211CQ12121 372 aa6.46□□□□□ -1.38
SNF4YGL115W YPR063CQ12160 140 aa6.46□□□□□ -1.38
SNF4YGL115W EAF3Q12432 401 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms