RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC4	YFL009W	YCR099C	P25657	155 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	DTR1	P38125	572 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	YBR013C	P38215	129 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	EFM1	P38732	585 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	RFC4	P40339	323 aa	Known RBP	4.64	□□□□□ -1.67
CDC4	YFL009W	PKP1	P40530	394 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	RPL10	P41805	221 aa	Known RBP	4.64	□□□□□ -1.67
CDC4	YFL009W	SSU1	P41930	458 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	MEP2	P41948	499 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	PFA3	P42836	336 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	RMD8	P43620	662 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	TAD2	P47058	250 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	PEX31	P53203	462 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	TIM13	P53299	105 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	SAY1	P53324	424 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	MTQ1	P53944	314 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	ARA2	Q04212	335 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	UPC2	Q12151	913 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	AGC1	Q12482	902 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	YPR145C-A	Q2V2P0	78 aa		4.64	□□□□□ -1.67
CDC4	YFL009W	MEX67	Q99257	599 aa	Known RBP	4.64	□□□□□ -1.67
CDC4	YFL009W	HRP1	Q99383	534 aa	Known RBP	4.64	□□□□□ -1.67
CDC4	YFL009W	PHO5	P00635	467 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SST2	P11972	698 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	UNG1	P12887	359 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	AMD1	P15274	810 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	MET8	P15807	274 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	PET9	P18239	318 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	ERD2	P18414	219 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	STE50	P25344	346 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	RER1	P25560	188 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	GSP1	P32835	219 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	GSP2	P32836	220 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	ALY1	P36117	915 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SRO77	P38163	1010 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	AIM10	P39965	576 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	HMF1	P40037	129 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	MMF1	P40185	145 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	GTS1	P40956	396 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	AGX1	P43567	385 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SNG1	P46950	547 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	DPB11	P47027	764 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	UFD1	P53044	361 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SDT1	P53078	280 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	YGL101W	P53144	215 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	TIM21	P53220	239 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	COQ6	P53318	479 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	IGO1	P53897	168 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	MSS11	Q03825	758 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	YMR087W	Q04299	284 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	GAD1	Q04792	585 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	NDJ1	Q12366	352 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	QCR7	P00128	127 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SIR2	P06700	562 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	CBP1	P07252	654 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	PUT1	P09368	476 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	CKA1	P15790	372 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	FUN14	P18411	198 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	RRP7	P25368	297 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	DAL80	P26343	269 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	YUR1	P26725	428 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	CLB6	P32943	380 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	SDH4	P37298	181 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	RTC2	P38279	296 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	YJR149W	P47177	404 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	DAN1	P47178	298 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	MTL1	P53214	551 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	ARG5,6	Q01217	863 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	MET14	Q02196	202 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	LEE1	Q02799	301 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	CTK1	Q03957	528 aa	Known RBP	4.63	□□□□□ -1.67
CDC4	YFL009W	FRQ1	Q06389	190 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	AAD4	Q07747	329 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	PLB3	Q08108	686 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	YOR114W	Q12219	294 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	RRI1	Q12468	440 aa		4.63	□□□□□ -1.67
CDC4	YFL009W	OAC1	P32332	324 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	VPH1	P32563	840 aa	Known RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	RRN10	P38204	145 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	OPT1	P40897	799 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	VOA1	P53262	265 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	NRK1	P53915	240 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	SNO1	Q03144	224 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	RSM10	Q03201	203 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	YLR173W	Q06247	608 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	YPR127W	Q06494	345 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	ERG27	Q12452	347 aa	Known RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	MRX4	Q12467	430 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	MHT1	Q12525	324 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	PRE1	P22141	198 aa	Known RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	MIR1	P23641	311 aa	Known RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	YCP4	P25349	247 aa	Known RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	YPT7	P32939	208 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	SFK1	P35735	353 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	YHR054C	P38780	354 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	ASP1	P38986	381 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC4	YFL009W	SUR2	P38992	349 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	PRM9	P39551	298 aa		4.62	□□□□□ -1.67
CDC4	YFL009W	PRP39	P39682	629 aa	Known RBP	4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms