RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	INO2	P26798	304 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	VMA6	P32366	345 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	IES6	P32617	166 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	SDH3	P33421	198 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	CUE2	P36075	443 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	PRS2	P38620	318 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	PFS1	P38872	237 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	MDM31	P38880	579 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	RPH1	P39956	796 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	YER034W	P40022	185 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	RFC4	P40339	323 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	CLD1	P53264	445 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	SCW4	P53334	386 aa	Known RBP	4.13	□□□□□ -1.75
UBC1	YDR177W	COS1	P53822	381 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	GRS2	Q06817	618 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	CSM4	Q08955	156 aa		4.13	□□□□□ -1.75
UBC1	YDR177W	LTE1	P07866	1435 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	SNQ2	P32568	1501 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	RPL15A	P05748	204 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	RPL23A	P0CX41	137 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	RPL23B	P0CX42	137 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	MATALPHA1	P0CY06	175 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	HMLALPHA1	P0CY07	175 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	STE18	P18852	110 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	OSM1	P21375	501 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	FUN26	P31381	517 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	PEX2	P32800	271 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	MCH2	P36032	473 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	RCK2	P38623	610 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	LSM12	P38828	187 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	MET30	P39014	640 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	SLM1	P40485	686 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	RPR2	P40571	144 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	TRM82	Q03774	444 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	VBA1	Q04301	562 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	THI7	Q05998	598 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	SPO77	Q06134	477 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	GAS2	Q06135	555 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	MRX9	Q07349	420 aa	Known RBP	4.12	□□□□□ -1.75
UBC1	YDR177W	ESA1	Q08649	445 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	YOR387C	Q08910	206 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	AI5_BETA	Q9ZZX0	354 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	MLP2	P40457	1679 aa		4.12	□□□□□ -1.75
UBC1	YDR177W	VPS15	P22219	1454 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	MYO4	P32492	1471 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	REP1	P03871	373 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	TFS1	P14306	219 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	LDS1	P31379	325 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	ASF2	P32448	525 aa	Predicted RBP	4.11	□□□□□ -1.75
UBC1	YDR177W	YBR137W	P38276	179 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	SLX1	P38324	304 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	YJL213W	P40896	331 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	IDP2	P41939	412 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	CTK3	P46963	296 aa	Predicted RBP	4.11	□□□□□ -1.75
UBC1	YDR177W	ASG7	P46993	209 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	YJR012C	P47087	207 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	TDA1	Q03533	586 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	SNA4	Q07549	140 aa		4.11	□□□□□ -1.75
UBC1	YDR177W	GEA2	P39993	1459 aa	Known RBP	4.11	□□□□□ -1.75
UBC1	YDR177W	TRP1	P00912	224 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	MRS3	P10566	314 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	RPB5	P20434	215 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	TPS2	P31688	896 aa	Known RBP	4.1	□□□□□ -1.75
UBC1	YDR177W	PDC2	P32896	925 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	MRX3	P38172	270 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	SOP4	P39543	234 aa	Predicted RBP	4.1	□□□□□ -1.75
UBC1	YDR177W	YNL208W	P40159	199 aa	Known RBP	4.1	□□□□□ -1.75
UBC1	YDR177W	PRM5	P40476	318 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	MOB2	P43563	287 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	CIN2	P46670	268 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	UBC13	P52490	153 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	LIF1	P53150	421 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	MSO1	P53604	210 aa	Known RBP	4.1	□□□□□ -1.75
UBC1	YDR177W	TMS1	Q12116	473 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	SPO14	P36126	1683 aa		4.1	□□□□□ -1.75
UBC1	YDR177W	THP2	O13539	261 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	RHO1	P06780	209 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	YPK2	P18961	677 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	DAL81	P21657	970 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	MIR1	P23641	311 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	RNA14	P25298	677 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	URA10	P30402	227 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	MRPL6	P32904	214 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	ARC19	P33204	171 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	GDS1	P41913	522 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	TIS11	P47977	285 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	CWC25	P53854	179 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	TRM44	Q02648	567 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	FSH2	Q05015	223 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	FRE8	Q12209	686 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	RPN6	Q12377	434 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	YDL199C	Q12407	687 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	YBL111C	Q3E7Y5	667 aa		4.09	□□□□□ -1.75
UBC1	YDR177W	PDR15	Q04182	1529 aa	Known RBP	4.09	□□□□□ -1.75
UBC1	YDR177W	HHF1	P02309	103 aa	Known RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	MSI1	P13712	422 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	CPR3	P25719	182 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	RPS5	P26783	225 aa	Known RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	STH1	P32597	1359 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms