RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	TFS1	P14306	219 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	ACB1	P31787	87 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	MIG2	P53035	382 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	UFD1	P53044	361 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	YGR168C	P53293	376 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	SEC13	Q04491	297 aa	Known RBP	0.92	□□□□□ -2.26
ATG31	YDR022C	DBP9	Q06218	594 aa	Known RBP	0.92	□□□□□ -2.26
ATG31	YDR022C	YLR012C	Q07927	99 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	TIM22	Q12328	207 aa		0.92	□□□□□ -2.26
ATG31	YDR022C	PFK27	Q12471	397 aa	Predicted RBP	0.92	□□□□□ -2.26
ATG31	YDR022C	TAL1	P15019	335 aa	Known RBP	0.91	□□□□□ -2.26
ATG31	YDR022C	SCO1	P23833	295 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	IMP1	P28627	190 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	CDC13	P32797	924 aa	Known RBP	0.91	□□□□□ -2.26
ATG31	YDR022C	DAN1	P47178	298 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	RSM27	P53305	110 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	ALG9	P53868	555 aa	Known RBP	0.91	□□□□□ -2.26
ATG31	YDR022C	IRC4	Q03036	179 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	RDS3	Q06835	107 aa	Predicted RBP	0.91	□□□□□ -2.26
ATG31	YDR022C	NFI1	Q12216	726 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	LAG2	Q92325	660 aa		0.91	□□□□□ -2.26
ATG31	YDR022C	RRT12	P25381	491 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	ZRT1	P32804	376 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	SOP4	P39543	234 aa	Predicted RBP	0.9	□□□□□ -2.27
ATG31	YDR022C	YIL089W	P40500	205 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	PRP24	P49960	444 aa	Known RBP	0.9	□□□□□ -2.27
ATG31	YDR022C	SSU72	P53538	206 aa	Predicted RBP	0.9	□□□□□ -2.27
ATG31	YDR022C	OSH6	Q02201	448 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	RCF1	Q03713	159 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	SNX41	Q04053	625 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	NNT1	Q05874	261 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	VPS68	Q12016	184 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	YDR262W	Q12331	272 aa		0.9	□□□□□ -2.27
ATG31	YDR022C	UTP23	Q12339	254 aa	Known RBP	0.9	□□□□□ -2.27
ATG31	YDR022C	RPL18A	P0CX49	186 aa	Known RBP	0.89	□□□□□ -2.27
ATG31	YDR022C	RPL18B	P0CX50	186 aa	Known RBP	0.89	□□□□□ -2.27
ATG31	YDR022C	GPX1	P36014	167 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	YBR062C	P38239	180 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	YHL044W	P38727	235 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	KRE29	P40026	464 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	SYS1	P41544	203 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	YFL064C	P43540	174 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	YFL040W	P43562	540 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	PIR5	P46999	287 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	BIO4	P53630	237 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	PML1	Q07930	204 aa	Predicted RBP	0.89	□□□□□ -2.27
ATG31	YDR022C	PRR2	Q12310	699 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	DCP1	Q12517	231 aa	Predicted RBP	0.89	□□□□□ -2.27
ATG31	YDR022C	YAL063C-A	Q3E791	96 aa		0.89	□□□□□ -2.27
ATG31	YDR022C	RNR2	P09938	399 aa	Known RBP	0.88	□□□□□ -2.27
ATG31	YDR022C	IFM1	P25038	676 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	VPH2	P32341	215 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	MRPL3	P36516	390 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	MBA1	P38300	278 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	YLR446W	Q06204	433 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	SAM4	Q08985	325 aa	Known RBP	0.88	□□□□□ -2.27
ATG31	YDR022C	YHR086W-A	Q3E746	53 aa		0.88	□□□□□ -2.27
ATG31	YDR022C	HIS3	P06633	220 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	YCR025C	P25352	136 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	RPL16B	P26785	198 aa	Known RBP	0.87	□□□□□ -2.27
ATG31	YDR022C	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
ATG31	YDR022C	TPO5	P36029	618 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	SIF2	P38262	535 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	YHR035W	P38769	630 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	AVT6	P40074	448 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	LIF1	P53150	421 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	YGR266W	P53326	701 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	SWT21	P53873	357 aa	Predicted RBP	0.87	□□□□□ -2.27
ATG31	YDR022C	MRS2	Q01926	470 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	YMR166C	Q03829	368 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	SUE1	Q06524	206 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	PBP4	Q07362	185 aa	Known RBP	0.87	□□□□□ -2.27
ATG31	YDR022C	RTC5	Q12108	567 aa	Known RBP	0.87	□□□□□ -2.27
ATG31	YDR022C	YPL150W	Q12152	901 aa		0.87	□□□□□ -2.27
ATG31	YDR022C	PAN1	P32521	1480 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	NUP157	P40064	1391 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	RPL26A	P05743	127 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	GAL3	P13045	520 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	SMI1	P32566	505 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	GCG1	P32656	232 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	MCH2	P36032	473 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	TRM7	P38238	310 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	UTP25	P40498	721 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	RPE1	P46969	238 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	YJR141W	P47172	347 aa	Predicted RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	SWC4	P53201	476 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	RPL26B	P53221	127 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	GRH1	Q04410	372 aa	Known RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	YLL007C	Q07799	665 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	RRP42	Q12277	265 aa	Predicted RBP	0.86	□□□□□ -2.27
ATG31	YDR022C	YPR1	Q12458	312 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	IZH4	Q99393	312 aa		0.86	□□□□□ -2.27
ATG31	YDR022C	VPH1	P32563	840 aa	Known RBP	0.85	□□□□□ -2.27
ATG31	YDR022C	COY1	P34237	679 aa		0.85	□□□□□ -2.27
ATG31	YDR022C	YKL162C	P36052	402 aa		0.85	□□□□□ -2.27
ATG31	YDR022C	YPC1	P38298	316 aa		0.85	□□□□□ -2.27
ATG31	YDR022C	SPL2	P38839	148 aa		0.85	□□□□□ -2.27
ATG31	YDR022C	OKP1	P53298	406 aa		0.85	□□□□□ -2.27
ATG31	YDR022C	PDR16	P53860	351 aa	Known RBP	0.85	□□□□□ -2.27
ATG31	YDR022C	TVP15	Q03860	143 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms