RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	AHA1	Q12449	350 aa	Known RBP	6.59	□□□□□ -1.35
CDC13	YDL220C	SLO1	Q3E784	85 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	MHF2	Q3E829	80 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	MYO1	P08964	1928 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	SST2	P11972	698 aa	Known RBP	6.59	□□□□□ -1.35
CDC13	YDL220C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	6.59	□□□□□ -1.35	not detected
CDC13	YDL220C	ADH7	P25377	361 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	URA10	P30402	227 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	SUA5	P32579	426 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	PPG1	P32838	368 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	ARP1	P38696	384 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	RPF1	P38805	295 aa	Known RBP	6.59	□□□□□ -1.35
CDC13	YDL220C	SFB3	P38810	929 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	GCV3	P39726	170 aa	Predicted RBP	6.59	□□□□□ -1.35
CDC13	YDL220C	SLZ1	P40167	298 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	FLX1	P40464	311 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	FIG4	P42837	879 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	THI12	P42883	340 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	THI5	P43534	340 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	RMD8	P43620	662 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	YNR061C	P53747	219 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	YPL077C	Q02831	240 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	CSM3	Q04659	317 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	ATG10	Q07879	167 aa		6.59	□□□□□ -1.35
CDC13	YDL220C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
CDC13	YDL220C	AIM17	P23180	465 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	CDC5	P32562	705 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	SDT1	P53078	280 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YGR035C	P53222	116 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	LSM3	P57743	89 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	TRM44	Q02648	567 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	MSS11	Q03825	758 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YMR130W	Q04223	302 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	INM2	Q05533	292 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YTM1	Q12024	460 aa	Predicted RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	BI3	Q9ZZW7	517 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YEL009C-A	A0A023PZF2	135 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	SAM35	P14693	329 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	SEC22	P22214	214 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	MIG1	P27705	504 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	NTF2	P33331	125 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	YPT31	P38555	223 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	FIR1	P40020	876 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	RRD1	P40454	393 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	SYS1	P41544	203 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	OST3	P48439	350 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YGR079W	P53249	370 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YAP1802	P53309	568 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	DIG2	Q03373	323 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	SPC19	Q03954	165 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	YDR444W	Q04093	687 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	RRP45	Q05636	305 aa	Known RBP	6.58	□□□□□ -1.36
CDC13	YDL220C	HRD3	Q05787	833 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	BSC6	Q08280	497 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	SUL2	Q12325	893 aa		6.58	□□□□□ -1.36
CDC13	YDL220C	RPS25B	P0C0T4	108 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	AME1	P38313	324 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	ARG2	P40360	574 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	NAS2	P40555	220 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	YJL171C	P46992	396 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	LCL3	P53153	274 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	SPP2	Q02521	185 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	PUS5	Q06244	254 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	TUM1	Q08686	304 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
CDC13	YDL220C	RPS25A	Q3E792	108 aa	Predicted RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	NHP6B	P11633	99 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	SCH9	P11792	824 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	CDC42	P19073	191 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	DOA1	P36037	715 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
CDC13	YDL220C	LSM2	P38203	95 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	FAA3	P39002	694 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	LSM5	P40089	93 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	SWM2	P40342	146 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	GDS1	P41913	522 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	YGL101W	P53144	215 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	FRE4	P53746	719 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	OAZ1	Q02803	292 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	PLB3	Q08108	686 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	CDC4	P07834	779 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	ERG20	P08524	352 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	YKL075C	P36083	450 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	ICS2	P38284	255 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	YHR210C	P38893	341 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	AXL2	P38928	823 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	PRP39	P39682	629 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	BMT5	P40493	336 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	IME4	P41833	600 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	TIM8	P57744	87 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	YDR132C	Q03900	495 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	ATC1	Q04005	294 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	NBP2	Q12163	236 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	SIA1	Q12212	622 aa		6.57	□□□□□ -1.36
CDC13	YDL220C	WTM1	Q12363	437 aa	Known RBP	6.57	□□□□□ -1.36
CDC13	YDL220C	NHP6A	P11632	93 aa	Known RBP	6.56	□□□□□ -1.36
CDC13	YDL220C	IRS4	P36115	615 aa	Known RBP	6.56	□□□□□ -1.36
CDC13	YDL220C	PAM16	P42949	149 aa		6.56	□□□□□ -1.36
CDC13	YDL220C	YDR415C	Q04033	374 aa	Predicted RBP	6.56	□□□□□ -1.36
CDC13	YDL220C	TMS1	Q12116	473 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms