RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C IRC19Q07843 230 aa6.69□□□□□ -1.34
RRP43YCR035C YOL024WQ08172 172 aa6.69□□□□□ -1.34
RRP43YCR035C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RRP43YCR035C IES3Q12345 250 aa6.69□□□□□ -1.34
RRP43YCR035C SET6Q12529 373 aa6.69□□□□□ -1.34
RRP43YCR035C YGR161W-CQ3E744 92 aa6.69□□□□□ -1.34
RRP43YCR035C KIN28P06242 306 aa6.68□□□□□ -1.34
RRP43YCR035C AIM17P23180 465 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C RPL24BP24000 155 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C PAD1P33751 242 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
RRP43YCR035C CHK1P38147 527 aa6.68□□□□□ -1.34
RRP43YCR035C MAL32P38158 584 aa6.68□□□□□ -1.34
RRP43YCR035C VBA2P38358 474 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C NVJ1P38881 321 aa6.68□□□□□ -1.34
RRP43YCR035C SEC24P40482 926 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C PHB1P40961 287 aa6.68□□□□□ -1.34
RRP43YCR035C PPT1P53043 513 aa6.68□□□□□ -1.34
RRP43YCR035C YGR066CP53242 292 aa6.68□□□□□ -1.34
RRP43YCR035C YGR126WP53274 230 aa6.68□□□□□ -1.34
RRP43YCR035C MAL12P53341 584 aa6.68□□□□□ -1.34
RRP43YCR035C PDR16P53860 351 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C SDC1Q03323 175 aa6.68□□□□□ -1.34
RRP43YCR035C SCS7Q03529 384 aa6.68□□□□□ -1.34
RRP43YCR035C MGR3Q04472 501 aa6.68□□□□□ -1.34
RRP43YCR035C MRPL1Q04599 285 aa6.68□□□□□ -1.34
RRP43YCR035C GAL83Q04739 417 aa6.68□□□□□ -1.34
RRP43YCR035C FMP42Q04991 504 aa6.68□□□□□ -1.34
RRP43YCR035C YLR173WQ06247 608 aa6.68□□□□□ -1.34
RRP43YCR035C FRE5Q08908 694 aa6.68□□□□□ -1.34
RRP43YCR035C THP3Q12049 470 aaKnown RBP6.68□□□□□ -1.34
RRP43YCR035C YAL064W-BO13512 126 aa6.67□□□□□ -1.34
RRP43YCR035C PEP4P07267 405 aaKnown RBP6.67□□□□□ -1.34
RRP43YCR035C YFR010W-AP0C5N0 62 aa6.67□□□□□ -1.34
RRP43YCR035C CPR2P23285 205 aa6.67□□□□□ -1.34
RRP43YCR035C SCO1P23833 295 aa6.67□□□□□ -1.34
RRP43YCR035C SBA1P28707 216 aaKnown RBP6.67□□□□□ -1.34
RRP43YCR035C UTP11P34247 250 aaPredicted RBP6.67□□□□□ -1.34
RRP43YCR035C SDP1P40479 209 aa6.67□□□□□ -1.34
RRP43YCR035C HIS6P40545 261 aa6.67□□□□□ -1.34
RRP43YCR035C VOA1P53262 265 aa6.67□□□□□ -1.34
RRP43YCR035C PBP1P53297 722 aaKnown RBP6.67□□□□□ -1.34
RRP43YCR035C ATG4P53867 494 aa6.67□□□□□ -1.34
RRP43YCR035C NUP116Q02630 1113 aa6.67□□□□□ -1.34
RRP43YCR035C YPL039WQ03080 316 aa6.67□□□□□ -1.34
RRP43YCR035C MDM36Q06820 579 aa6.67□□□□□ -1.34
RRP43YCR035C MTR10Q99189 972 aa6.67□□□□□ -1.34
RRP43YCR035C GPM1P00950 247 aaKnown RBP6.66□□□□□ -1.34
RRP43YCR035C YGL041W-AP0C5N3 154 aa6.66□□□□□ -1.34
RRP43YCR035C NFT1P0CE68 1218 aa6.66□□□□□ -1.34
RRP43YCR035C SEC12P11655 471 aa6.66□□□□□ -1.34
RRP43YCR035C PDX1P16451 410 aa6.66□□□□□ -1.34
RRP43YCR035C ECT1P33412 323 aa6.66□□□□□ -1.34
RRP43YCR035C YPK3P38070 525 aa6.66□□□□□ -1.34
RRP43YCR035C CHS7P38843 316 aa6.66□□□□□ -1.34
RRP43YCR035C MLH1P38920 769 aa6.66□□□□□ -1.34
RRP43YCR035C PCL6P40038 420 aa6.66□□□□□ -1.34
RRP43YCR035C PFS2P42841 465 aaKnown RBP6.66□□□□□ -1.34
RRP43YCR035C FDC1Q03034 503 aa6.66□□□□□ -1.34
RRP43YCR035C SRL4Q03085 281 aa6.66□□□□□ -1.34
RRP43YCR035C GRX3Q03835 250 aa6.66□□□□□ -1.34
RRP43YCR035C RRP17Q04031 235 aaPredicted RBP6.66□□□□□ -1.34
RRP43YCR035C YPR147CQ06522 304 aaKnown RBP6.66□□□□□ -1.34
RRP43YCR035C YOR378WQ08902 515 aa6.66□□□□□ -1.34
RRP43YCR035C YOL114CQ12322 202 aa6.66□□□□□ -1.34
RRP43YCR035C CLB2P24869 491 aa6.65□□□□□ -1.34
RRP43YCR035C COS9P36034 407 aa6.65□□□□□ -1.34
RRP43YCR035C SDS22P36047 338 aa6.65□□□□□ -1.34
RRP43YCR035C DTR1P38125 572 aa6.65□□□□□ -1.34
RRP43YCR035C MOH1P38191 138 aa6.65□□□□□ -1.34
RRP43YCR035C FMP23P38231 175 aa6.65□□□□□ -1.34
RRP43YCR035C RPS26AP39938 119 aaKnown RBP6.65□□□□□ -1.34
RRP43YCR035C RPS26BP39939 119 aaKnown RBP6.65□□□□□ -1.34
RRP43YCR035C JLP2P40206 208 aa6.65□□□□□ -1.34
RRP43YCR035C RFC4P40339 323 aaKnown RBP6.65□□□□□ -1.34
RRP43YCR035C YIL169CP40442 995 aa6.65□□□□□ -1.34
RRP43YCR035C BPL1P48445 690 aaPredicted RBP6.65□□□□□ -1.34
RRP43YCR035C SAY1P53324 424 aa6.65□□□□□ -1.34
RRP43YCR035C SUR7P54003 302 aa6.65□□□□□ -1.34
RRP43YCR035C RBS1Q05672 457 aaKnown RBP6.65□□□□□ -1.34
RRP43YCR035C RRP9Q06506 573 aaKnown RBP6.65□□□□□ -1.34
RRP43YCR035C IPK1Q06667 281 aa6.65□□□□□ -1.34
RRP43YCR035C AIM6Q07716 390 aa6.65□□□□□ -1.34
RRP43YCR035C REP1P03871 373 aa6.64□□□□□ -1.35
RRP43YCR035C CDC9P04819 755 aa6.64□□□□□ -1.35
RRP43YCR035C RPL7AP05737 244 aaKnown RBP6.64□□□□□ -1.35
RRP43YCR035C STE12P13574 688 aa6.64□□□□□ -1.35
RRP43YCR035C MDH2P22133 377 aa6.64□□□□□ -1.35
RRP43YCR035C GIT1P25346 518 aa6.64□□□□□ -1.35
RRP43YCR035C NFS1P25374 497 aa6.64□□□□□ -1.35
RRP43YCR035C FUN19P28003 413 aaPredicted RBP6.64□□□□□ -1.35
RRP43YCR035C PPA2P28239 310 aa6.64□□□□□ -1.35
RRP43YCR035C FUN26P31381 517 aa6.64□□□□□ -1.35
RRP43YCR035C ATS1P31386 333 aa6.64□□□□□ -1.35
RRP43YCR035C MGE1P38523 228 aa6.64□□□□□ -1.35
RRP43YCR035C YER184CP39961 794 aa6.64□□□□□ -1.35
RRP43YCR035C PAM16P42949 149 aa6.64□□□□□ -1.35
RRP43YCR035C PRY1P47032 299 aa6.64□□□□□ -1.35
RRP43YCR035C YAE1P47118 141 aaPredicted RBP6.64□□□□□ -1.35
RRP43YCR035C YGL260WP53056 76 aa6.64□□□□□ -1.35
RRP43YCR035C NOG1Q02892 647 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms