RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YPR114W	Q06107	315 aa		3.94	□□□□□ -1.78
SHE1	YBL031W	UIP4	Q08926	304 aa		3.94	□□□□□ -1.78
SHE1	YBL031W	GSC2	P40989	1895 aa		3.94	□□□□□ -1.78
SHE1	YBL031W	RAS2	P01120	322 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	DBP3	P20447	523 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	YCR099C	P25657	155 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	SPS19	P32573	292 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	SOR1	P35497	357 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	ZTA1	P38230	334 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	URA8	P38627	578 aa	Predicted RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	FCY21	P40039	528 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	SHO1	P40073	367 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	YIP1	P53039	248 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	ARO8	P53090	500 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	LSG1	P53145	640 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	PCP1	P53259	346 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	YNL140C	P53910	189 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	MRP51	Q02950	344 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	ODC1	Q03028	310 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	GOT1	Q03554	138 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	YMR111C	Q04461	462 aa	Predicted RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	ERP1	Q05359	219 aa	Known RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	SOR2	Q07786	357 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	REX4	Q08237	289 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	SMF3	Q12078	473 aa	Predicted RBP	3.93	□□□□□ -1.78
SHE1	YBL031W	PEX11	Q12462	236 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	YCL012C	Q8J0M4	134 aa		3.93	□□□□□ -1.78
SHE1	YBL031W	STE3	P06783	470 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	CPA1	P07258	411 aa	Known RBP	3.92	□□□□□ -1.78
SHE1	YBL031W	MAS1	P10507	462 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	MRS3	P10566	314 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	TFS1	P14306	219 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	RCN1	P36054	211 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	YCR041W	P37265	110 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	ECM8	P38246	354 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	AVT6	P40074	448 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	YIF1	P53845	314 aa	Known RBP	3.92	□□□□□ -1.78
SHE1	YBL031W	PEX10	Q05568	337 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	YHC1	Q05900	231 aa	Known RBP	3.92	□□□□□ -1.78
SHE1	YBL031W	YLR456W	Q06199	204 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	MDM36	Q06820	579 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	DAP1	Q12091	152 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	JLP1	Q12358	412 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	YDL199C	Q12407	687 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	RMD5	Q12508	421 aa		3.92	□□□□□ -1.78
SHE1	YBL031W	DCP1	Q12517	231 aa	Predicted RBP	3.92	□□□□□ -1.78
SHE1	YBL031W	MDM35	O60200	86 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	RHO1	P06780	209 aa	Known RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	RPL20A	P0CX23	172 aa	Known RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	RPL20B	P0CX24	172 aa	Predicted RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	CBS2	P14905	389 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	GIT1	P25346	518 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	CTR86	P25355	563 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	PUT3	P25502	979 aa	Predicted RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	YCR100C	P25606	316 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	UBC8	P28263	218 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	SSO1	P32867	290 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	ASC1	P38011	319 aa	Known RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	RCK1	P38622	512 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	ARN2	P38724	620 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	TVP23	P38962	199 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	SOP4	P39543	234 aa	Predicted RBP	3.91	□□□□□ -1.78
SHE1	YBL031W	YAL037W	P39728	267 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	MTW1	P39731	289 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	YGR201C	P42936	225 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	YJR149W	P47177	404 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	YGR168C	P53293	376 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	VAC7	P53950	1165 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	SPR6	Q01684	191 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	GPI17	Q04080	534 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	SKS1	Q12505	502 aa		3.91	□□□□□ -1.78
SHE1	YBL031W	RPL15A	P05748	204 aa	Known RBP	3.9	□□□□□ -1.79
SHE1	YBL031W	RPL1A	P0CX43	217 aa	Known RBP	3.9	□□□□□ -1.79
SHE1	YBL031W	RPL1B	P0CX44	217 aa	Known RBP	3.9	□□□□□ -1.79
SHE1	YBL031W	CAP2	P13517	287 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	DAL81	P21657	970 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
SHE1	YBL031W	ITR2	P30606	609 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	NTG1	P31378	399 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	PMU1	P36069	295 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	YBR063C	P38083	404 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	MDM31	P38880	579 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	SPO73	P40031	143 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	PAN6	P40459	309 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	PMT4	P46971	762 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	HOC1	P47124	396 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	ZRG17	P53735	605 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	PRM1	P53835	661 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	EOS1	P53938	366 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	IMP4	P53941	290 aa	Known RBP	3.9	□□□□□ -1.79
SHE1	YBL031W	GPI15	P53961	229 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	CRZ1	P53968	678 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	RNY1	Q02933	434 aa	Known RBP	3.9	□□□□□ -1.79
SHE1	YBL031W	GIP3	Q03016	1276 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	PIR3	Q03180	325 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	YMR010W	Q03687	405 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	TRM82	Q03774	444 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	MGR3	Q04472	501 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	APC4	Q04601	652 aa		3.9	□□□□□ -1.79
SHE1	YBL031W	SPO77	Q06134	477 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms