RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W REX4Q08237 289 aa0.5□□□□□ -2.33
UTP20YBL004W ENB1Q08299 606 aa0.5□□□□□ -2.33
UTP20YBL004W FRE8Q12209 686 aa0.5□□□□□ -2.33
UTP20YBL004W PWP1P21304 576 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W MRPS28P21771 286 aa0.5□□□□□ -2.33
UTP20YBL004W TRX2P22803 104 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W CAT2P32796 670 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W MRP51Q02950 344 aa0.5□□□□□ -2.33
UTP20YBL004W ECI1Q05871 280 aa0.5□□□□□ -2.33
UTP20YBL004W IRC19Q07843 230 aa0.5□□□□□ -2.33
UTP20YBL004W YPR063CQ12160 140 aa0.5□□□□□ -2.33
UTP20YBL004W YOR343CQ12484 108 aa0.5□□□□□ -2.33
UTP20YBL004W RAD51P25454 400 aa0.49□□□□□ -2.33
UTP20YBL004W GPX1P36014 167 aa0.49□□□□□ -2.33
UTP20YBL004W SCO2P38072 301 aa0.49□□□□□ -2.33
UTP20YBL004W NPT1P39683 429 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W YGR045CP53229 120 aa0.49□□□□□ -2.33
UTP20YBL004W DIA1P54005 336 aa0.49□□□□□ -2.33
UTP20YBL004W YDR239CQ03780 787 aa0.49□□□□□ -2.33
UTP20YBL004W HPT1Q04178 221 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W DCS2Q12123 353 aa0.49□□□□□ -2.33
UTP20YBL004W YGR161W-CQ3E744 92 aa0.49□□□□□ -2.33
UTP20YBL004W NRP1P32770 719 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
UTP20YBL004W MFT1P33441 392 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W IST2P38250 946 aa0.49□□□□□ -2.33
UTP20YBL004W GTO1P48239 356 aa0.49□□□□□ -2.33
UTP20YBL004W YGR111WP53265 400 aa0.49□□□□□ -2.33
UTP20YBL004W NRD1P53617 575 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
UTP20YBL004W PSR2Q07949 397 aa0.49□□□□□ -2.33
UTP20YBL004W USV1Q12132 391 aa0.49□□□□□ -2.33
UTP20YBL004W RLM1Q12224 676 aa0.49□□□□□ -2.33
UTP20YBL004W ARF1P11076 181 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W ART10P18634 518 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W FES1P38260 290 aa0.49□□□□□ -2.33
UTP20YBL004W BMT2P38278 337 aa0.49□□□□□ -2.33
UTP20YBL004W WSS1P38838 269 aa0.49□□□□□ -2.33
UTP20YBL004W HXT7P39004 570 aa0.49□□□□□ -2.33
UTP20YBL004W EFM3P47163 339 aa0.49□□□□□ -2.33
UTP20YBL004W YMR166CQ03829 368 aa0.49□□□□□ -2.33
UTP20YBL004W HED1Q03937 162 aa0.49□□□□□ -2.33
UTP20YBL004W CSF1Q12150 2958 aa0.49□□□□□ -2.33
UTP20YBL004W GSH1P32477 678 aa0.49□□□□□ -2.33
UTP20YBL004W SRY1P36007 326 aa0.49□□□□□ -2.33
UTP20YBL004W PHO90P39535 881 aa0.49□□□□□ -2.33
UTP20YBL004W DCS1Q06151 350 aa0.49□□□□□ -2.33
UTP20YBL004W YNG1Q08465 219 aa0.49□□□□□ -2.33
UTP20YBL004W RAD28Q12021 506 aa0.49□□□□□ -2.33
UTP20YBL004W JLP1Q12358 412 aa0.49□□□□□ -2.33
UTP20YBL004W YCR087C-AP37263 153 aa0.49□□□□□ -2.33
UTP20YBL004W APL3P38065 1025 aa0.49□□□□□ -2.33
UTP20YBL004W DIA4P38705 446 aaPredicted RBP0.49□□□□□ -2.33
UTP20YBL004W SEC9P40357 651 aa0.49□□□□□ -2.33
UTP20YBL004W DIA3P52290 468 aa0.49□□□□□ -2.33
UTP20YBL004W YGL235WP53071 178 aa0.49□□□□□ -2.33
UTP20YBL004W YPL071CQ02864 156 aa0.49□□□□□ -2.33
UTP20YBL004W MIX17Q03667 156 aa0.49□□□□□ -2.33
UTP20YBL004W GPI17Q04080 534 aa0.49□□□□□ -2.33
UTP20YBL004W FPR4Q06205 392 aaPredicted RBP0.49□□□□□ -2.33
UTP20YBL004W NOP12Q08208 459 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W PDE2P06776 526 aa0.49□□□□□ -2.33
UTP20YBL004W GCD2P12754 651 aaPredicted RBP0.49□□□□□ -2.33
UTP20YBL004W MTC6P38849 526 aa0.49□□□□□ -2.33
UTP20YBL004W CPR6P53691 371 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W SVL3Q03088 825 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W GRC3Q07845 632 aa0.49□□□□□ -2.33
UTP20YBL004W USB1Q12208 290 aaKnown RBP0.49□□□□□ -2.33
UTP20YBL004W ATG34Q12292 412 aa0.49□□□□□ -2.33
UTP20YBL004W YPR1Q12458 312 aa0.49□□□□□ -2.33
UTP20YBL004W YMR105W-AQ8TGS8 64 aa0.49□□□□□ -2.33
UTP20YBL004W SPT3P06844 337 aa0.48□□□□□ -2.33
UTP20YBL004W ERG3P32353 365 aa0.48□□□□□ -2.33
UTP20YBL004W REC114P32841 428 aa0.48□□□□□ -2.33
UTP20YBL004W YGR210CP42942 411 aa0.48□□□□□ -2.33
UTP20YBL004W ATP25Q03153 612 aa0.48□□□□□ -2.33
UTP20YBL004W TY1A-DR2Q03964 440 aaKnown RBP0.48□□□□□ -2.33
UTP20YBL004W YEH2Q07950 538 aa0.48□□□□□ -2.33
UTP20YBL004W TY1A-BLQ12266 440 aa0.48□□□□□ -2.33
UTP20YBL004W ZRT2Q12436 422 aa0.48□□□□□ -2.33
UTP20YBL004W SEC53P07283 254 aaKnown RBP0.48□□□□□ -2.33
UTP20YBL004W YJL118WP47022 219 aa0.48□□□□□ -2.33
UTP20YBL004W IBD2P53892 351 aa0.48□□□□□ -2.33
UTP20YBL004W STE23Q06010 1027 aa0.48□□□□□ -2.33
UTP20YBL004W SEI1Q06058 285 aa0.48□□□□□ -2.33
UTP20YBL004W MET17P06106 444 aa0.48□□□□□ -2.33
UTP20YBL004W YML002WP0CF17 737 aa0.48□□□□□ -2.33
UTP20YBL004W ARP2P32381 391 aaKnown RBP0.48□□□□□ -2.33
UTP20YBL004W RRP1P35178 278 aaPredicted RBP0.48□□□□□ -2.33
UTP20YBL004W TMA19P35691 167 aaKnown RBP0.48□□□□□ -2.33
UTP20YBL004W YCR041WP37265 110 aa0.48□□□□□ -2.33
UTP20YBL004W OTU2P38747 307 aaKnown RBP0.48□□□□□ -2.33
UTP20YBL004W PHM8P40025 321 aa0.48□□□□□ -2.33
UTP20YBL004W YPL107WQ02873 248 aa0.48□□□□□ -2.33
UTP20YBL004W SPO19Q03029 223 aa0.48□□□□□ -2.33
UTP20YBL004W NRG1Q03125 231 aa0.48□□□□□ -2.33
UTP20YBL004W NHP10Q03435 203 aa0.48□□□□□ -2.33
UTP20YBL004W ORT1Q12375 292 aa0.48□□□□□ -2.33
UTP20YBL004W YGR240C-AQ3E786 66 aa0.48□□□□□ -2.33
UTP20YBL004W CYC1P00044 109 aaPredicted RBP0.48□□□□□ -2.33
UTP20YBL004W PUT1P09368 476 aa0.48□□□□□ -2.33
UTP20YBL004W SNO3P43544 222 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms