RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C CKS1P20486 150 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C NFS1P25374 497 aa3.74□□□□□ -1.81
PTA1YAL043C ADE1P27616 306 aa3.74□□□□□ -1.81
PTA1YAL043C PUB1P32588 453 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
PTA1YAL043C SUI1P32911 108 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C CPR5P35176 225 aa3.74□□□□□ -1.81
PTA1YAL043C TCD2P36101 447 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C POA1P38218 177 aa3.74□□□□□ -1.81
PTA1YAL043C MSS4P38994 779 aa3.74□□□□□ -1.81
PTA1YAL043C BAP3P41815 604 aa3.74□□□□□ -1.81
PTA1YAL043C SFH5P47008 294 aa3.74□□□□□ -1.81
PTA1YAL043C YHC3P47040 408 aa3.74□□□□□ -1.81
PTA1YAL043C UBX6P47049 396 aa3.74□□□□□ -1.81
PTA1YAL043C VHT1P53241 593 aa3.74□□□□□ -1.81
PTA1YAL043C TPC1P53257 314 aa3.74□□□□□ -1.81
PTA1YAL043C RBG2P53295 368 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C BIO5P53744 561 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C PDR16P53860 351 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C TAZ1Q06510 381 aa3.74□□□□□ -1.81
PTA1YAL043C HRT1Q08273 121 aa3.74□□□□□ -1.81
PTA1YAL043C TPO4Q12256 659 aa3.74□□□□□ -1.81
PTA1YAL043C INP53Q12271 1107 aa3.74□□□□□ -1.81
PTA1YAL043C RRP12Q12754 1228 aaKnown RBP3.74□□□□□ -1.81
PTA1YAL043C RPS14AP06367 137 aaKnown RBP3.73□□□□□ -1.81
PTA1YAL043C YPK2P18961 677 aa3.73□□□□□ -1.81
PTA1YAL043C RNQ1P25367 405 aa3.73□□□□□ -1.81
PTA1YAL043C PUT3P25502 979 aaPredicted RBP3.73□□□□□ -1.81
PTA1YAL043C AHC2P25649 128 aa3.73□□□□□ -1.81
PTA1YAL043C YMC1P32331 307 aa3.73□□□□□ -1.81
PTA1YAL043C SRB5P32585 307 aa3.73□□□□□ -1.81
PTA1YAL043C RML2P32611 393 aa3.73□□□□□ -1.81
PTA1YAL043C VPS17P32913 551 aa3.73□□□□□ -1.81
PTA1YAL043C YKL097CP34245 136 aa3.73□□□□□ -1.81
PTA1YAL043C YKL069WP36088 180 aa3.73□□□□□ -1.81
PTA1YAL043C OMA1P36163 345 aa3.73□□□□□ -1.81
PTA1YAL043C MAL32P38158 584 aa3.73□□□□□ -1.81
PTA1YAL043C YMR262WP38430 313 aa3.73□□□□□ -1.81
PTA1YAL043C YHR097CP38809 366 aaKnown RBP3.73□□□□□ -1.81
PTA1YAL043C LYS1P38998 373 aaRIP-Chip data3.73□□□□□ -1.81not detected
PTA1YAL043C RPS14BP39516 138 aaKnown RBP3.73□□□□□ -1.81
PTA1YAL043C YER184CP39961 794 aa3.73□□□□□ -1.81
PTA1YAL043C MMF1P40185 145 aaKnown RBP3.73□□□□□ -1.81
PTA1YAL043C TAD2P47058 250 aa3.73□□□□□ -1.81
PTA1YAL043C MAL12P53341 584 aa3.73□□□□□ -1.81
PTA1YAL043C TDA1Q03533 586 aa3.73□□□□□ -1.81
PTA1YAL043C AIM36Q03798 255 aa3.73□□□□□ -1.81
PTA1YAL043C OPI10Q08202 246 aa3.73□□□□□ -1.81
PTA1YAL043C SYC1Q08553 188 aaPredicted RBP3.73□□□□□ -1.81
PTA1YAL043C FRE3Q08905 711 aa3.73□□□□□ -1.81
PTA1YAL043C FDH1Q08911 376 aa3.73□□□□□ -1.81
PTA1YAL043C YOL163WP0CF20 169 aa3.73□□□□□ -1.81
PTA1YAL043C HAP4P14064 554 aa3.73□□□□□ -1.81
PTA1YAL043C MGR1P25573 417 aa3.73□□□□□ -1.81
PTA1YAL043C CTS1P29029 562 aa3.73□□□□□ -1.81
PTA1YAL043C ANR2P36090 516 aaPredicted RBP3.73□□□□□ -1.81
PTA1YAL043C VPS52P39904 641 aa3.73□□□□□ -1.81
PTA1YAL043C BIT61P47041 543 aa3.73□□□□□ -1.81
PTA1YAL043C NIT3P49954 291 aa3.73□□□□□ -1.81
PTA1YAL043C UBC9P50623 157 aaPredicted RBP3.73□□□□□ -1.81
PTA1YAL043C PMT5P52867 743 aa3.73□□□□□ -1.81
PTA1YAL043C CCE1Q03702 353 aa3.73□□□□□ -1.81
PTA1YAL043C YFT2Q06676 274 aa3.73□□□□□ -1.81
PTA1YAL043C YOL073CQ08232 322 aa3.73□□□□□ -1.81
PTA1YAL043C YDL177CQ12257 170 aa3.73□□□□□ -1.81
PTA1YAL043C RTN2Q12443 393 aa3.73□□□□□ -1.81
PTA1YAL043C TMA7Q3E764 64 aaKnown RBP3.73□□□□□ -1.81
PTA1YAL043C STE18P18852 110 aa3.72□□□□□ -1.81
PTA1YAL043C PTP1P25044 335 aa3.72□□□□□ -1.81
PTA1YAL043C CNE1P27825 502 aa3.72□□□□□ -1.81
PTA1YAL043C MDH3P32419 343 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PTA1YAL043C MSS1P32559 526 aaPredicted RBP3.72□□□□□ -1.81
PTA1YAL043C PDR3P33200 976 aa3.72□□□□□ -1.81
PTA1YAL043C CCT6P39079 546 aa3.72□□□□□ -1.81
PTA1YAL043C SSO2P39926 295 aa3.72□□□□□ -1.81
PTA1YAL043C MOB1P40484 314 aa3.72□□□□□ -1.81
PTA1YAL043C SNM1P40993 198 aa3.72□□□□□ -1.81
PTA1YAL043C PSA1P41940 361 aaKnown RBP3.72□□□□□ -1.81
PTA1YAL043C MTO1P53070 669 aa3.72□□□□□ -1.81
PTA1YAL043C FLC3P53121 802 aa3.72□□□□□ -1.81
PTA1YAL043C IMP4P53941 290 aaKnown RBP3.72□□□□□ -1.81
PTA1YAL043C RTT103Q05543 409 aa3.72□□□□□ -1.81
PTA1YAL043C SNA4Q07549 140 aa3.72□□□□□ -1.81
PTA1YAL043C RDR1Q08904 546 aa3.72□□□□□ -1.81
PTA1YAL043C VPS68Q12016 184 aa3.72□□□□□ -1.81
PTA1YAL043C SET6Q12529 373 aa3.72□□□□□ -1.81
PTA1YAL043C MEX67Q99257 599 aaKnown RBP3.72□□□□□ -1.81
PTA1YAL043C YBR085C-AO43137 85 aa3.71□□□□□ -1.81
PTA1YAL043C MCK1P21965 375 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C DBP2P24783 546 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C MXR2P25566 168 aa3.71□□□□□ -1.81
PTA1YAL043C ERG24P32462 438 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C SUR1P33300 382 aa3.71□□□□□ -1.81
PTA1YAL043C NAT2P37293 288 aa3.71□□□□□ -1.81
PTA1YAL043C GPP1P41277 250 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C MCM22P47167 239 aa3.71□□□□□ -1.81
PTA1YAL043C YNR014WP53719 212 aa3.71□□□□□ -1.81
PTA1YAL043C CAF40P53829 373 aa3.71□□□□□ -1.81
PTA1YAL043C CUZ1P53899 274 aa3.71□□□□□ -1.81
PTA1YAL043C YMR265CQ03508 461 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C TY1A-DR2Q03964 440 aaKnown RBP3.71□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms