RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
MSH6-201ENST00000234420 RASGRP4Q8TDF6 673 aa11.77□□□□□ -0.53
MSH6-201ENST00000234420 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.53
MSH6-201ENST00000234420 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.53
MSH6-201ENST00000234420 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.53
MSH6-201ENST00000234420 MTIF3Q9H2K0 278 aaKnown RBP11.77□□□□□ -0.53
MSH6-201ENST00000234420 RAB23Q9ULC3 237 aa11.77□□□□□ -0.53
MSH6-201ENST00000234420 PBLDP30039 288 aaPredicted RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 ARFIP2P53365 341 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 VEPH1Q14D04 833 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 MUC3BQ9H195 1237 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 PARVBQ9HBI1 364 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 DNAJB2P25686 324 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 DYNLL1P63167 89 aaKnown RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 EMBQ6PCB8 327 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 SYNE4Q8N205 404 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ANKRD49Q8WVL7 239 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 DNAJC9Q8WXX5 260 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 EYA1Q99502 592 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 SP110Q9HB58 689 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 GOLGA8MH3BSY2 632 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 TCF3P15923 654 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 AKR1D1P51857 326 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 PKP1Q13835 747 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 NAA30Q147X3 362 aaPredicted RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 ATAD3BQ5T9A4 648 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ZFP42Q96MM3 310 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 IMPDH2P12268 514 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 IL10P22301 178 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 GCKRQ14397 625 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 C10orf53Q8N6V4 93 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 CATSPER1Q8NEC5 780 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 DAPK1P53355 1430 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 PPP6R3Q5H9R7 873 aaPredicted RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 KLC3Q6P597 504 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 YME1L1Q96TA2 773 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 MYBL1P10243 752 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 KDSRQ06136 332 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 ATXN7L3BQ96GX2 97 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 PBKQ96KB5 322 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
MSH6-201ENST00000234420 SPTLC3Q9NUV7 552 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
MSH6-201ENST00000234420 RGS5O15539 181 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SOX11P35716 441 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 ARL4AP40617 200 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 HIC1Q14526 733 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 THNSL1Q8IYQ7 743 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 RUBCNLQ9H714 662 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 MPP6Q9NZW5 540 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 MEFVO15553 781 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 C6orf222P0C671 652 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 ADORA2BP29275 332 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 MAPRE1Q15691 268 aaKnown RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 EXOC3L4Q17RC7 722 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TRIM63Q969Q1 353 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 OSBPL10Q9BXB5 764 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 EPC1Q9H2F5 836 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 ZMYND8Q9ULU4 1186 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 ENO1P06733 434 aaKnown RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 YY1P25490 414 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TAF1CQ15572 869 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 ALFQ53S48 1182 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TTC23LQ6PF05 361 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 SPATA33Q96N06 139 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 GTF2A1LQ9UNN4 478 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 CUL1Q13616 776 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 GTF2H3Q13889 308 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SPDYE7PQ495Y7 208 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SAYSD1Q9NPB0 183 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TAF4O00268 1085 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 STRNO43815 780 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 OR1G1P47890 313 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
MSH6-201ENST00000234420 PHKG1Q16816 387 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TRIM69Q86WT6 500 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms