RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 NTC20P38302 140 aaPredicted RBP-2.31□□□□□ -2.78
snR53snR53 YHR022CP38763 256 aa-2.31□□□□□ -2.78
snR53snR53 SPL2P38839 148 aa-2.31□□□□□ -2.78
snR53snR53 PMT4P46971 762 aa-2.31□□□□□ -2.78
snR53snR53 GON7P46984 123 aa-2.31□□□□□ -2.78
snR53snR53 ERG25P53045 309 aa-2.31□□□□□ -2.78
snR53snR53 YMR130WQ04223 302 aa-2.31□□□□□ -2.78
snR53snR53 NAT4Q04751 285 aa-2.31□□□□□ -2.78
snR53snR53 VTA1Q06263 330 aa-2.31□□□□□ -2.78
snR53snR53 SCM3Q12334 223 aa-2.31□□□□□ -2.78
snR53snR53 PAN1P32521 1480 aa-2.32□□□□□ -2.78
snR53snR53 MSB2P32334 1306 aa-2.32□□□□□ -2.78
snR53snR53 INM1P38710 295 aa-2.32□□□□□ -2.78
snR53snR53 RIO2P40160 425 aaKnown RBP-2.32□□□□□ -2.78
snR53snR53 OST3P48439 350 aa-2.32□□□□□ -2.78
snR53snR53 RPN9Q04062 393 aaKnown RBP-2.32□□□□□ -2.78
snR53snR53 MIM1Q08176 113 aa-2.32□□□□□ -2.78
snR53snR53 SAS5Q99314 248 aa-2.32□□□□□ -2.78
snR53snR53 UBA3Q99344 299 aa-2.32□□□□□ -2.78
snR53snR53 DDI2P0CH63 225 aa-2.33□□□□□ -2.78
snR53snR53 DDI3P0CH64 225 aa-2.33□□□□□ -2.78
snR53snR53 GPI10P30777 616 aa-2.33□□□□□ -2.78
snR53snR53 PES4P39684 611 aa-2.33□□□□□ -2.78
snR53snR53 TIF34P40217 347 aaKnown RBP-2.33□□□□□ -2.78
snR53snR53 YGL138CP53122 345 aa-2.33□□□□□ -2.78
snR53snR53 APC5Q08683 685 aa-2.33□□□□□ -2.78
snR53snR53 RNH203Q12338 110 aa-2.33□□□□□ -2.78
snR53snR53 FKS1P38631 1876 aaKnown RBP-2.33□□□□□ -2.78
snR53snR53 NUP157P40064 1391 aaKnown RBP-2.34□□□□□ -2.78
snR53snR53 RPL12AP0CX53 165 aaKnown RBP-2.34□□□□□ -2.78
snR53snR53 RPL12BP0CX54 165 aa-2.34□□□□□ -2.78
snR53snR53 YHR212W-AP0CX91 67 aa-2.34□□□□□ -2.78
snR53snR53 FZF1P32805 299 aa-2.34□□□□□ -2.78
snR53snR53 SUR1P33300 382 aa-2.34□□□□□ -2.78
snR53snR53 CIK1Q01649 594 aa-2.34□□□□□ -2.78
snR53snR53 NNT1Q05874 261 aa-2.34□□□□□ -2.78
snR53snR53 YLL007CQ07799 665 aa-2.34□□□□□ -2.78
snR53snR53 SUR2P38992 349 aa-2.35□□□□□ -2.79
snR53snR53 YNL320WP42840 284 aa-2.35□□□□□ -2.79
snR53snR53 PRP3Q03338 469 aaPredicted RBP-2.35□□□□□ -2.79
snR53snR53 PRP42Q03776 544 aaKnown RBP-2.35□□□□□ -2.79
snR53snR53 GYL1Q04322 720 aa-2.35□□□□□ -2.79
snR53snR53 ARC18Q05933 178 aaKnown RBP-2.35□□□□□ -2.79
snR53snR53 YPL162CQ12042 273 aa-2.35□□□□□ -2.79
snR53snR53 VIK1Q12045 647 aa-2.35□□□□□ -2.79
snR53snR53 DET1Q99288 334 aaKnown RBP-2.35□□□□□ -2.79
snR53snR53 TAO3P40468 2376 aa-2.35□□□□□ -2.79
snR53snR53 RSR1P13856 272 aa-2.36□□□□□ -2.79
snR53snR53 AIM29P36154 155 aa-2.36□□□□□ -2.79
snR53snR53 KEL2P50090 882 aa-2.36□□□□□ -2.79
snR53snR53 MAL13P53338 473 aa-2.36□□□□□ -2.79
snR53snR53 VPS75P53853 264 aa-2.36□□□□□ -2.79
snR53snR53 MRPS8Q03799 155 aa-2.36□□□□□ -2.79
snR53snR53 TVP15Q03860 143 aa-2.36□□□□□ -2.79
snR53snR53 YMR114CQ04471 368 aaKnown RBP-2.36□□□□□ -2.79
snR53snR53 DCS1Q06151 350 aa-2.36□□□□□ -2.79
snR53snR53 PRM3Q08931 133 aa-2.36□□□□□ -2.79
snR53snR53 RUP1Q12242 671 aa-2.36□□□□□ -2.79
snR53snR53 SFI1Q12369 946 aa-2.36□□□□□ -2.79
snR53snR53 STP22P25604 385 aa-2.37□□□□□ -2.79
snR53snR53 MUD2P36084 527 aaKnown RBP-2.37□□□□□ -2.79
snR53snR53 EFM4P40516 257 aa-2.37□□□□□ -2.79
snR53snR53 REP1P03871 373 aa-2.38□□□□□ -2.79
snR53snR53 GAL7P08431 366 aa-2.38□□□□□ -2.79
snR53snR53 MAS1P10507 462 aa-2.38□□□□□ -2.79
snR53snR53 RNA1P11745 407 aaKnown RBP-2.38□□□□□ -2.79
snR53snR53 STN1P38960 494 aa-2.38□□□□□ -2.79
snR53snR53 YDR541CQ03049 344 aa-2.38□□□□□ -2.79
snR53snR53 DON1Q05610 365 aa-2.38□□□□□ -2.79
snR53snR53 OPY2Q06810 360 aa-2.38□□□□□ -2.79
snR53snR53 SHS1Q07657 551 aa-2.38□□□□□ -2.79
snR53snR53 MTR10Q99189 972 aa-2.38□□□□□ -2.79
snR53snR53 MRPL8P22353 238 aa-2.39□□□□□ -2.79
snR53snR53 TOM40P23644 387 aaKnown RBP-2.39□□□□□ -2.79
snR53snR53 OCA4P25366 362 aa-2.39□□□□□ -2.79
snR53snR53 RPL16BP26785 198 aaKnown RBP-2.39□□□□□ -2.79
snR53snR53 MCM10P32354 571 aa-2.39□□□□□ -2.79
snR53snR53 YSC83P32792 385 aa-2.39□□□□□ -2.79
snR53snR53 NOP4P37838 685 aaKnown RBP-2.39□□□□□ -2.79
snR53snR53 PHO88P38264 188 aaPredicted RBP-2.39□□□□□ -2.79
snR53snR53 OTU2P38747 307 aaKnown RBP-2.39□□□□□ -2.79
snR53snR53 YHR182WP38870 785 aa-2.39□□□□□ -2.79
snR53snR53 YJR079WP47126 109 aa-2.39□□□□□ -2.79
snR53snR53 SML1Q04964 104 aa-2.39□□□□□ -2.79
snR53snR53 PTH2P34222 208 aa-2.4□□□□□ -2.79
snR53snR53 DIG2Q03373 323 aaKnown RBP-2.4□□□□□ -2.79
snR53snR53 PEX12Q04370 399 aa-2.4□□□□□ -2.79
snR53snR53 URC2Q04411 772 aa-2.4□□□□□ -2.79
snR53snR53 YDL144CQ07589 356 aa-2.4□□□□□ -2.79
snR53snR53 YHR139C-AO13536 103 aa-2.41□□□□□ -2.8
snR53snR53 GCN4P03069 281 aa-2.41□□□□□ -2.8
snR53snR53 HSP104P31539 908 aaKnown RBP-2.41□□□□□ -2.8
snR53snR53 VPH2P32341 215 aa-2.41□□□□□ -2.8
snR53snR53 YIL012WP40551 113 aa-2.41□□□□□ -2.8
snR53snR53 JJJ1P53863 590 aa-2.41□□□□□ -2.8
snR53snR53 SPH1Q06160 661 aa-2.41□□□□□ -2.8
snR53snR53 RRI2Q12348 645 aa-2.41□□□□□ -2.8
snR53snR53 POX1P13711 748 aa-2.42□□□□□ -2.8
snR53snR53 ARO3P14843 370 aaKnown RBP-2.42□□□□□ -2.8
snR53snR53 NRP1P32770 719 aaKnown RBP RIP-Chip data-2.42□□□□□ -2.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms