RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP100	YPL174C	CUE3	P53137	624 aa	Known RBP	0.91	□□□□□ -2.26
NIP100	YPL174C	SYF2	P53277	215 aa	Predicted RBP	0.91	□□□□□ -2.26
NIP100	YPL174C	PXR1	P53335	271 aa	Predicted RBP	0.91	□□□□□ -2.26
NIP100	YPL174C	SCS7	Q03529	384 aa		0.91	□□□□□ -2.26
NIP100	YPL174C	YPL245W	Q12179	454 aa	Known RBP	0.91	□□□□□ -2.26
NIP100	YPL174C	RPN6	Q12377	434 aa		0.91	□□□□□ -2.26
NIP100	YPL174C	NBL1	Q3E7Y6	73 aa		0.91	□□□□□ -2.26
NIP100	YPL174C	SPA2	P23201	1466 aa	Known RBP	0.91	□□□□□ -2.26
NIP100	YPL174C	RPS16A	P0CX51	143 aa	Known RBP	0.9	□□□□□ -2.26
NIP100	YPL174C	RPS16B	P0CX52	143 aa	Known RBP	0.9	□□□□□ -2.26
NIP100	YPL174C	KRE1	P17260	313 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	DAL81	P21657	970 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	FAA1	P30624	700 aa	Known RBP	0.9	□□□□□ -2.26
NIP100	YPL174C	VMA5	P31412	392 aa	Known RBP	0.9	□□□□□ -2.26
NIP100	YPL174C	PUP2	P32379	260 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	DSK2	P48510	373 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	YGR168C	P53293	376 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	YPL278C	Q08990	100 aa		0.9	□□□□□ -2.26
NIP100	YPL174C	YKL187C	P34231	750 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	SDH4	P37298	181 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	YIL089W	P40500	205 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	SDS23	P53172	527 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	TPC1	P53257	314 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	RSM27	P53305	110 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	YNL040W	P53960	456 aa	Predicted RBP	0.9	□□□□□ -2.27
NIP100	YPL174C	YDR222W	Q04925	415 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	ECM19	Q06011	112 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	PEX30	Q06169	523 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	SGT2	Q12118	346 aa	Known RBP	0.9	□□□□□ -2.27
NIP100	YPL174C	YPL150W	Q12152	901 aa		0.9	□□□□□ -2.27
NIP100	YPL174C	PFK27	Q12471	397 aa	Predicted RBP	0.9	□□□□□ -2.27
NIP100	YPL174C	AIM45	Q12480	344 aa	Known RBP	0.9	□□□□□ -2.27
NIP100	YPL174C	RAD1	P06777	1100 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	DAP2	P18962	818 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	RRT12	P25381	491 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	RPB9	P27999	122 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	YPS1	P32329	569 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	AIM29	P36154	155 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	FYV8	P46949	817 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	HSH155	P49955	971 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	UTP6	Q02354	440 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	RVB1	Q03940	463 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	TRM10	Q12400	293 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	NUP157	P40064	1391 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	YAK1	P14680	807 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	RDS1	P25611	832 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	IMP1	P28627	190 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	ZRT1	P32804	376 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	MMS21	P38632	267 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	MED6	P38782	295 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	RRG9	P40156	214 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	BTT1	P40314	149 aa	Predicted RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	PMT4	P46971	762 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	RDL2	Q08742	149 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	SAM4	Q08985	325 aa	Known RBP	0.89	□□□□□ -2.27
NIP100	YPL174C	LAG2	Q92325	660 aa		0.89	□□□□□ -2.27
NIP100	YPL174C	YCH1	P42937	148 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	TAF6	P53040	516 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	YNL143C	P53908	130 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	RCF1	Q03713	159 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	NNT1	Q05874	261 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	YPL264C	Q08980	353 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	RRP42	Q12277	265 aa	Predicted RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	UTP23	Q12339	254 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	SFG1	Q12507	346 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	REP1	P03871	373 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	RSA4	P25382	515 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	DCC1	P25559	380 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	ARO4	P32449	370 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	CDC13	P32797	924 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	LAS1	P36146	502 aa	Predicted RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	SMC2	P38989	1170 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	ALG9	P53868	555 aa	Known RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	GTO3	Q04806	366 aa		0.88	□□□□□ -2.27
NIP100	YPL174C	DIB1	Q06819	143 aa	Predicted RBP	0.88	□□□□□ -2.27
NIP100	YPL174C	SAG1	P20840	650 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	ACB1	P31787	87 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	YMR134W	P40207	237 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	MIG2	P53035	382 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	RDS3	Q06835	107 aa	Predicted RBP	0.87	□□□□□ -2.27
NIP100	YPL174C	TY3A-G	Q12173	290 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	NFI1	Q12216	726 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	ERP3	Q12403	225 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	TY3A-I	Q99219	290 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	SPT7	P35177	1332 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	DNA2	P38859	1522 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	KRE29	P40026	464 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	PRP24	P49960	444 aa	Known RBP	0.87	□□□□□ -2.27
NIP100	YPL174C	YNR066C	P53752	436 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	IRC4	Q03036	179 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	YPR1	Q12458	312 aa		0.87	□□□□□ -2.27
NIP100	YPL174C	SMI1	P32566	505 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	YIA6	P40556	373 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	FEX1	Q08913	375 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	FEX2	Q08991	375 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	PRM4	Q12498	284 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	YOL163W	P0CF20	169 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	YFR045W	P43617	309 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	RPE1	P46969	238 aa		0.86	□□□□□ -2.27
NIP100	YPL174C	MNN5	P46982	586 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms