RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MEX67Q99257 599 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W RPL20AP0CX23 172 aaKnown RBP2.04□□□□□ -2.08
VPS16YPL045W RPL20BP0CX24 172 aaPredicted RBP2.04□□□□□ -2.08
VPS16YPL045W HEM15P16622 393 aa2.04□□□□□ -2.08
VPS16YPL045W RAD51P25454 400 aa2.04□□□□□ -2.08
VPS16YPL045W PUT3P25502 979 aaPredicted RBP2.04□□□□□ -2.08
VPS16YPL045W PRR1P28708 518 aa2.04□□□□□ -2.08
VPS16YPL045W BIG1P38813 335 aa2.04□□□□□ -2.08
VPS16YPL045W COA1P40452 197 aa2.04□□□□□ -2.08
VPS16YPL045W RAD17P48581 401 aa2.04□□□□□ -2.08
VPS16YPL045W LSG1P53145 640 aaKnown RBP2.04□□□□□ -2.08
VPS16YPL045W MYO5Q04439 1219 aaKnown RBP2.04□□□□□ -2.08
VPS16YPL045W YLR283WQ05867 314 aa2.04□□□□□ -2.08
VPS16YPL045W PAM18Q07914 168 aa2.04□□□□□ -2.08
VPS16YPL045W SDO1Q07953 250 aaKnown RBP2.04□□□□□ -2.08
VPS16YPL045W DSE3Q08729 430 aa2.04□□□□□ -2.08
VPS16YPL045W YNL162W-AQ3E7A8 72 aa2.04□□□□□ -2.08
VPS16YPL045W JIP3O13555 125 aa2.03□□□□□ -2.08
VPS16YPL045W TDH2P00358 332 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W RPL15AP05748 204 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W MER1P16523 270 aa2.03□□□□□ -2.08
VPS16YPL045W SRB4P32569 687 aa2.03□□□□□ -2.08
VPS16YPL045W MUD1P32605 298 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W PRS4P38063 326 aaPredicted RBP2.03□□□□□ -2.08
VPS16YPL045W SIP3P38717 1229 aa2.03□□□□□ -2.08
VPS16YPL045W YHR035WP38769 630 aa2.03□□□□□ -2.08
VPS16YPL045W MTC6P38849 526 aa2.03□□□□□ -2.08
VPS16YPL045W COX14P39103 70 aa2.03□□□□□ -2.08
VPS16YPL045W YIL169CP40442 995 aa2.03□□□□□ -2.08
VPS16YPL045W CGR1P53188 120 aa2.03□□□□□ -2.08
VPS16YPL045W IBD2P53892 351 aa2.03□□□□□ -2.08
VPS16YPL045W ERP1Q05359 219 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W THI7Q05998 598 aa2.03□□□□□ -2.08
VPS16YPL045W ASR1Q06834 288 aa2.03□□□□□ -2.08
VPS16YPL045W NDE2Q07500 545 aa2.03□□□□□ -2.08
VPS16YPL045W LOT6Q07923 191 aa2.03□□□□□ -2.08
VPS16YPL045W RPN6Q12377 434 aa2.03□□□□□ -2.08
VPS16YPL045W YBL111CQ3E7Y5 667 aa2.03□□□□□ -2.08
VPS16YPL045W CDC36P06100 191 aaPredicted RBP2.03□□□□□ -2.08
VPS16YPL045W PIS1P06197 220 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W RPL31AP0C2H8 113 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W HPR1P17629 752 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W DAL82P21705 255 aa2.03□□□□□ -2.08
VPS16YPL045W PTP1P25044 335 aa2.03□□□□□ -2.08
VPS16YPL045W SEC1P30619 724 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W ZIP1P31111 875 aa2.03□□□□□ -2.08
VPS16YPL045W AGA1P32323 725 aa2.03□□□□□ -2.08
VPS16YPL045W MEI5P32489 222 aa2.03□□□□□ -2.08
VPS16YPL045W KAR9P32526 644 aa2.03□□□□□ -2.08
VPS16YPL045W YKL063CP35725 167 aa2.03□□□□□ -2.08
VPS16YPL045W YKL071WP36086 256 aa2.03□□□□□ -2.08
VPS16YPL045W AVT5P38176 459 aa2.03□□□□□ -2.08
VPS16YPL045W YBP1P38315 674 aa2.03□□□□□ -2.08
VPS16YPL045W ARC40P38328 384 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W YND1P40009 630 aa2.03□□□□□ -2.08
VPS16YPL045W WWM1P43582 211 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W LCB3P47013 409 aa2.03□□□□□ -2.08
VPS16YPL045W MRM2P53123 320 aa2.03□□□□□ -2.08
VPS16YPL045W NUP116Q02630 1113 aa2.03□□□□□ -2.08
VPS16YPL045W YPL077CQ02831 240 aa2.03□□□□□ -2.08
VPS16YPL045W ENT5Q03769 411 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W FMP42Q04991 504 aa2.03□□□□□ -2.08
VPS16YPL045W DIB1Q06819 143 aaPredicted RBP2.03□□□□□ -2.08
VPS16YPL045W THP3Q12049 470 aaKnown RBP2.03□□□□□ -2.08
VPS16YPL045W UTP10P42945 1769 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W CYC3P06182 269 aa2.02□□□□□ -2.09
VPS16YPL045W MATALPHA1P0CY06 175 aa2.02□□□□□ -2.09
VPS16YPL045W HMLALPHA1P0CY07 175 aa2.02□□□□□ -2.09
VPS16YPL045W MET16P18408 261 aaPredicted RBP2.02□□□□□ -2.09
VPS16YPL045W VPS1P21576 704 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W CHA1P25379 360 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W RPL16AP26784 199 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W RAD5P32849 1169 aaPredicted RBP2.02□□□□□ -2.09
VPS16YPL045W RPH1P39956 796 aa2.02□□□□□ -2.09
VPS16YPL045W PCI8P40512 444 aa2.02□□□□□ -2.09
VPS16YPL045W DFG10P40526 253 aa2.02□□□□□ -2.09
VPS16YPL045W CIN2P46670 268 aa2.02□□□□□ -2.09
VPS16YPL045W TIS11P47977 285 aa2.02□□□□□ -2.09
VPS16YPL045W GIM3P53900 129 aa2.02□□□□□ -2.09
VPS16YPL045W ALG11P53954 548 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W KTR6P54070 446 aa2.02□□□□□ -2.09
VPS16YPL045W TDA1Q03533 586 aa2.02□□□□□ -2.09
VPS16YPL045W VBA1Q04301 562 aa2.02□□□□□ -2.09
VPS16YPL045W GTO3Q04806 366 aa2.02□□□□□ -2.09
VPS16YPL045W ADH6Q04894 360 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W YOR387CQ08910 206 aa2.02□□□□□ -2.09
VPS16YPL045W SLM3Q12093 417 aa2.02□□□□□ -2.09
VPS16YPL045W REP1P03871 373 aa2.02□□□□□ -2.09
VPS16YPL045W CPR1P14832 162 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W DAL81P21657 970 aa2.02□□□□□ -2.09
VPS16YPL045W YCR043CP25361 127 aa2.02□□□□□ -2.09
VPS16YPL045W RPS5P26783 225 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W MGM101P32787 269 aaKnown RBP2.02□□□□□ -2.09
VPS16YPL045W SPO23P33757 523 aa2.02□□□□□ -2.09
VPS16YPL045W ASK1P35734 292 aa2.02□□□□□ -2.09
VPS16YPL045W AIM29P36154 155 aa2.02□□□□□ -2.09
VPS16YPL045W ECM8P38246 354 aa2.02□□□□□ -2.09
VPS16YPL045W TDA11P38854 504 aa2.02□□□□□ -2.09
VPS16YPL045W MET30P39014 640 aa2.02□□□□□ -2.09
VPS16YPL045W YNL320WP42840 284 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 96.9 ms