RNA–Protein interactions for RNA: YOR056C

NOB1, Transcript of Protein involved in proteasomal and 40S ribosomal subunit biogenesis, yeast

Gene NOB1, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOB1	YOR056C	LOT5	P34234	306 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	YOR062C	P36025	268 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	NSG1	P38837	291 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	YER010C	P40011	234 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	PXR1	P53335	271 aa	Predicted RBP	4.77	□□□□□ -1.65
NOB1	YOR056C	TMA20	P89886	181 aa	Predicted RBP	4.77	□□□□□ -1.65
NOB1	YOR056C	YDR249C	Q03787	373 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	ORM2	Q06144	216 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	COS7	Q07788	383 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	LOT6	Q07923	191 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	USV1	Q12132	391 aa		4.77	□□□□□ -1.65
NOB1	YOR056C	YRA1	Q12159	226 aa	Known RBP	4.77	□□□□□ -1.65
NOB1	YOR056C	YOR097C	Q12274	175 aa	Predicted RBP	4.77	□□□□□ -1.65
NOB1	YOR056C	RPS21B	Q3E754	87 aa	Known RBP	4.77	□□□□□ -1.65
NOB1	YOR056C	CBS1	P14066	229 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	PBN1	P25580	416 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YPT7	P32939	208 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YBR241C	P38142	488 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	SSZ1	P38788	538 aa	Known RBP	4.76	□□□□□ -1.65
NOB1	YOR056C	PTH1	P38876	190 aa	Known RBP	4.76	□□□□□ -1.65
NOB1	YOR056C	YHR218W	P38899	603 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	SWD1	P39706	426 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YRB2	P40517	327 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	SMK1	P41808	388 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YFR054C	P43622	192 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	LSG1	P53145	640 aa	Known RBP	4.76	□□□□□ -1.65
NOB1	YOR056C	YGR066C	P53242	292 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YNR068C	P53754	272 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YNL095C	P53932	642 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	YMR099C	Q03161	297 aa	Known RBP	4.76	□□□□□ -1.65
NOB1	YOR056C	HRI1	Q05905	244 aa	Known RBP	4.76	□□□□□ -1.65
NOB1	YOR056C	BUR2	Q05949	395 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	ARO10	Q06408	635 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	DCI1	Q08558	271 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	VCX1	Q99385	411 aa		4.76	□□□□□ -1.65
NOB1	YOR056C	CBP6	P07253	162 aa	Predicted RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	RAP1	P11938	827 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	KSS1	P14681	368 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	POL4	P25615	582 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	SAC1	P32368	623 aa	Known RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	SEC66	P33754	206 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	ZTA1	P38230	334 aa	Known RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	YBR138C	P38277	524 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	ECM34	P38728	170 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	GOS1	P38736	223 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	SHO1	P40073	367 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	DBP6	P53734	629 aa	Known RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	APM1	Q00776	475 aa	Predicted RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	SPR6	Q01684	191 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	RAD33	Q04231	177 aa		4.75	□□□□□ -1.65
NOB1	YOR056C	YMR226C	Q05016	267 aa	Known RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	DTD1	Q07648	150 aa	Known RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	FMP40	Q08968	688 aa	Predicted RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	FOL3	Q12676	427 aa	Predicted RBP	4.75	□□□□□ -1.65
NOB1	YOR056C	THP2	O13539	261 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	FBA1	P14540	359 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	PDX1	P16451	410 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	MER1	P16523	270 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	LHP1	P33399	275 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	MTR2	P34232	184 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	TEF4	P36008	412 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	YMR262W	P38430	313 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	MTW1	P39731	289 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	AVT6	P40074	448 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	IMO32	P53219	342 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	RHO5	P53879	331 aa	Known RBP	4.74	□□□□□ -1.65
NOB1	YOR056C	MMT1	Q03218	510 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	RSN1	Q03516	953 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	EKI1	Q03764	534 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	YDR239C	Q03780	787 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	SNX41	Q04053	625 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	ARR1	Q06596	294 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	GPI11	Q06636	219 aa		4.74	□□□□□ -1.65
NOB1	YOR056C	PUT2	P07275	575 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	MET2	P08465	486 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	MDH2	P22133	377 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	CMK2	P22517	447 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	YCK1	P23291	538 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	UBC8	P28263	218 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	NPL6	P32832	435 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	UTP11	P34247	250 aa	Predicted RBP	4.73	□□□□□ -1.65
NOB1	YOR056C	RCK1	P38622	512 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	NIT2	P47016	307 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	MSY1	P48527	492 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	YGR054W	P53235	642 aa	Known RBP	4.73	□□□□□ -1.65
NOB1	YOR056C	SVL3	Q03088	825 aa	Known RBP	4.73	□□□□□ -1.65
NOB1	YOR056C	CTL1	Q03220	320 aa	Known RBP	4.73	□□□□□ -1.65
NOB1	YOR056C	RIM13	Q03792	727 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	PEX12	Q04370	399 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	COX20	Q04935	205 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	FMP42	Q04991	504 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	VIK1	Q12045	647 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	MSH5	Q12175	901 aa		4.73	□□□□□ -1.65
NOB1	YOR056C	NCE102	Q12207	173 aa	RIP-Chip data	4.73	□□□□□ -1.65	not detected
NOB1	YOR056C	PFK27	Q12471	397 aa	Predicted RBP	4.73	□□□□□ -1.65
NOB1	YOR056C	CDC36	P06100	191 aa	Predicted RBP	4.72	□□□□□ -1.65
NOB1	YOR056C	HEM4	P06174	275 aa		4.72	□□□□□ -1.65
NOB1	YOR056C	RAD7	P06779	565 aa		4.72	□□□□□ -1.65
NOB1	YOR056C	GAL3	P13045	520 aa		4.72	□□□□□ -1.65
NOB1	YOR056C	FAR1	P21268	830 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms