RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W CBF5P33322 483 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SWM2YNR004W RFT1P38206 574 aaPredicted RBP2.02□□□□□ -2.09
SWM2YNR004W SWC5P38326 303 aa2.02□□□□□ -2.09
SWM2YNR004W TRR2P38816 342 aa2.02□□□□□ -2.09
SWM2YNR004W YCH1P42937 148 aa2.02□□□□□ -2.09
SWM2YNR004W GTO1P48239 356 aa2.02□□□□□ -2.09
SWM2YNR004W LIF1P53150 421 aa2.02□□□□□ -2.09
SWM2YNR004W OKP1P53298 406 aa2.02□□□□□ -2.09
SWM2YNR004W IES4Q08561 116 aa2.02□□□□□ -2.09
SWM2YNR004W TAF10Q12030 206 aa2.02□□□□□ -2.09
SWM2YNR004W RRP42Q12277 265 aaPredicted RBP2.02□□□□□ -2.09
SWM2YNR004W MDY2Q12285 212 aa2.02□□□□□ -2.09
SWM2YNR004W YOR012WQ12351 137 aa2.02□□□□□ -2.09
SWM2YNR004W RPN6Q12377 434 aa2.02□□□□□ -2.09
SWM2YNR004W YPR1Q12458 312 aa2.02□□□□□ -2.09
SWM2YNR004W ERD1P16151 362 aa2.01□□□□□ -2.09
SWM2YNR004W ZRT1P32804 376 aa2.01□□□□□ -2.09
SWM2YNR004W PDC2P32896 925 aa2.01□□□□□ -2.09
SWM2YNR004W MCH2P36032 473 aa2.01□□□□□ -2.09
SWM2YNR004W SMP1P38128 452 aa2.01□□□□□ -2.09
SWM2YNR004W TAE1P38340 232 aa2.01□□□□□ -2.09
SWM2YNR004W RRF1P38771 230 aa2.01□□□□□ -2.09
SWM2YNR004W YER184CP39961 794 aa2.01□□□□□ -2.09
SWM2YNR004W RRT13P40042 185 aa2.01□□□□□ -2.09
SWM2YNR004W SNX41Q04053 625 aa2.01□□□□□ -2.09
SWM2YNR004W UTP15Q04305 513 aaKnown RBP2.01□□□□□ -2.09
SWM2YNR004W API2Q04413 109 aa2.01□□□□□ -2.09
SWM2YNR004W RRG8Q06109 277 aa2.01□□□□□ -2.09
SWM2YNR004W TRM10Q12400 293 aa2.01□□□□□ -2.09
SWM2YNR004W PAA1Q12447 191 aaKnown RBP2.01□□□□□ -2.09
SWM2YNR004W SPO24Q3E752 67 aa2.01□□□□□ -2.09
SWM2YNR004W PUT4P15380 627 aa2□□□□□ -2.09
SWM2YNR004W FMT1P32785 401 aa2□□□□□ -2.09
SWM2YNR004W MRPL6P32904 214 aa2□□□□□ -2.09
SWM2YNR004W YKL063CP35725 167 aa2□□□□□ -2.09
SWM2YNR004W AIM29P36154 155 aa2□□□□□ -2.09
SWM2YNR004W SOP4P39543 234 aaPredicted RBP2□□□□□ -2.09
SWM2YNR004W FRT2P39734 528 aa2□□□□□ -2.09
SWM2YNR004W AIM20P40451 204 aa2□□□□□ -2.09
SWM2YNR004W YGR018CP53211 109 aa2□□□□□ -2.09
SWM2YNR004W HST4P53688 370 aa2□□□□□ -2.09
SWM2YNR004W RNY1Q02933 434 aaKnown RBP2□□□□□ -2.09
SWM2YNR004W SPO19Q03029 223 aa2□□□□□ -2.09
SWM2YNR004W INP2Q03824 705 aa2□□□□□ -2.09
SWM2YNR004W YLR446WQ06204 433 aa2□□□□□ -2.09
SWM2YNR004W MMT2Q08970 484 aa2□□□□□ -2.09
SWM2YNR004W BI3Q9ZZW7 517 aa2□□□□□ -2.09
SWM2YNR004W CAR2P07991 424 aaKnown RBP1.99□□□□□ -2.09
SWM2YNR004W RPL16BP26785 198 aaKnown RBP1.99□□□□□ -2.09
SWM2YNR004W INO2P26798 304 aa1.99□□□□□ -2.09
SWM2YNR004W SWD2P36104 329 aaPredicted RBP1.99□□□□□ -2.09
SWM2YNR004W YHI9P38765 294 aa1.99□□□□□ -2.09
SWM2YNR004W PEX18P38855 283 aa1.99□□□□□ -2.09
SWM2YNR004W ASP1P38986 381 aaPredicted RBP1.99□□□□□ -2.09
SWM2YNR004W PCL7P40186 285 aa1.99□□□□□ -2.09
SWM2YNR004W OSW5P40219 148 aa1.99□□□□□ -2.09
SWM2YNR004W SLM1P40485 686 aa1.99□□□□□ -2.09
SWM2YNR004W YFL064CP43540 174 aa1.99□□□□□ -2.09
SWM2YNR004W BUD13P46947 266 aaPredicted RBP1.99□□□□□ -2.09
SWM2YNR004W RIB4P50861 169 aaPredicted RBP1.99□□□□□ -2.09
SWM2YNR004W RSM27P53305 110 aa1.99□□□□□ -2.09
SWM2YNR004W ERV41Q04651 352 aa1.99□□□□□ -2.09
SWM2YNR004W ARC18Q05933 178 aaKnown RBP1.99□□□□□ -2.09
SWM2YNR004W STE23Q06010 1027 aa1.99□□□□□ -2.09
SWM2YNR004W CUR1Q06469 252 aa1.99□□□□□ -2.09
SWM2YNR004W BER1Q06688 274 aaKnown RBP1.99□□□□□ -2.09
SWM2YNR004W VAC14Q06708 880 aa1.99□□□□□ -2.09
SWM2YNR004W ERP3Q12403 225 aa1.99□□□□□ -2.09
SWM2YNR004W TFC7Q12415 435 aa1.99□□□□□ -2.09
SWM2YNR004W PFK27Q12471 397 aaPredicted RBP1.99□□□□□ -2.09
SWM2YNR004W AUS1Q08409 1394 aa1.98□□□□□ -2.09
SWM2YNR004W CUP2P15315 225 aa1.98□□□□□ -2.09
SWM2YNR004W HPR1P17629 752 aaKnown RBP1.98□□□□□ -2.09
SWM2YNR004W UGA1P17649 471 aa1.98□□□□□ -2.09
SWM2YNR004W SKG6P32900 734 aaPredicted RBP1.98□□□□□ -2.09
SWM2YNR004W MRPL40P36534 297 aa1.98□□□□□ -2.09
SWM2YNR004W FRM2P37261 193 aa1.98□□□□□ -2.09
SWM2YNR004W RCK1P38622 512 aa1.98□□□□□ -2.09
SWM2YNR004W HIS2P38635 335 aa1.98□□□□□ -2.09
SWM2YNR004W MRX5P47007 382 aa1.98□□□□□ -2.09
SWM2YNR004W COG7P53195 279 aa1.98□□□□□ -2.09
SWM2YNR004W YGR266WP53326 701 aa1.98□□□□□ -2.09
SWM2YNR004W YNL260CP53846 198 aa1.98□□□□□ -2.09
SWM2YNR004W CSI1Q04368 295 aa1.98□□□□□ -2.09
SWM2YNR004W YDR018CQ12185 396 aa1.98□□□□□ -2.09
SWM2YNR004W LAG2Q92325 660 aa1.98□□□□□ -2.09
SWM2YNR004W YOL085CQ99345 113 aa1.98□□□□□ -2.09
SWM2YNR004W TDH3P00359 332 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SWM2YNR004W ATP6P00854 259 aa1.97□□□□□ -2.09
SWM2YNR004W RPL24AP04449 155 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W RAD7P06779 565 aa1.97□□□□□ -2.09
SWM2YNR004W RPL31AP0C2H8 113 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W OSM1P21375 501 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W VPS1P21576 704 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W TPS2P31688 896 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W CYM1P32898 989 aa1.97□□□□□ -2.09
SWM2YNR004W FET3P38993 636 aa1.97□□□□□ -2.09
SWM2YNR004W YPT32P51996 222 aaKnown RBP1.97□□□□□ -2.09
SWM2YNR004W UBC13P52490 153 aa1.97□□□□□ -2.09
SWM2YNR004W YGL118CP53132 145 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 94.3 ms