RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	RSF2	P46974	1380 aa		2.75	□□□□□ -1.97
PEX6	YNL329C	RPL5	P26321	297 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	YUR1	P26725	428 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	POP5	P28005	173 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	ITR2	P30606	609 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	PHA2	P32452	334 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	TMT1	P32643	299 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	EBS1	Q03466	884 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	ECM18	Q04623	453 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	HMS1	Q12398	434 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	YBL059W	P34224	193 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	DED81	P38707	554 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	WSC4	P38739	605 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	PEX18	P38855	283 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	SHQ1	P40486	507 aa	Predicted RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	TRF5	P48561	642 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	PXR1	P53335	271 aa	Predicted RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	ARO80	Q04052	950 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	YMR317W	Q04893	1140 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	ATG38	Q05789	226 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	PBP4	Q07362	185 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	FCY22	Q12119	530 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	HHF1	P02309	103 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	RBK1	P25332	333 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	RPL16A	P26784	199 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	HXT1	P32465	570 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	SRB4	P32569	687 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	TOA2	P32774	122 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	VAM7	P32912	316 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	SDH3	P33421	198 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	FMP46	P36141	133 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	ECM4	P36156	370 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	YBR062C	P38239	180 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	TDA11	P38854	504 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	MAL13	P53338	473 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	GIM3	P53900	129 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	RRN11	Q04712	507 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	RTN1	Q04947	295 aa	Known RBP	2.74	□□□□□ -1.97
PEX6	YNL329C	YPR091C	Q06833	770 aa		2.74	□□□□□ -1.97
PEX6	YNL329C	RPL24A	P04449	155 aa	Known RBP	2.73	□□□□□ -1.97
PEX6	YNL329C	RAD3	P06839	778 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	MATALPHA2	P0CY08	210 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	HMLALPHA2	P0CY09	210 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	RNA14	P25298	677 aa	Known RBP	2.73	□□□□□ -1.97
PEX6	YNL329C	MKK1	P32490	508 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	YKL070W	P36087	169 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	IDP2	P41939	412 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	YFR057W	P43625	151 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	YPL080C	Q02826	108 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	CLP1	Q08685	445 aa	Predicted RBP	2.73	□□□□□ -1.97
PEX6	YNL329C	PHO13	P19881	312 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	DAL2	P25335	343 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	SPR1	P32603	445 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	ILM1	P47155	203 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	CWC21	Q03375	135 aa	Known RBP	2.73	□□□□□ -1.97
PEX6	YNL329C	NDD1	Q08887	554 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	UBA3	Q99344	299 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	FIG2	P25653	1609 aa		2.73	□□□□□ -1.97
PEX6	YNL329C	RPS14A	P06367	137 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	MMS21	P38632	267 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	RPS14B	P39516	138 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	YJR085C	P47131	105 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	BIR1	P47134	954 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	TAF6	P53040	516 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	RRN5	Q02983	363 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	CSM3	Q04659	317 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	YOL107W	Q12239	342 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	GPI12	P23797	304 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	RPC19	P28000	142 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	KRE6	P32486	720 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	ZRT1	P32804	376 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	ECT1	P33412	323 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	IST2	P38250	946 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	SMC2	P38989	1170 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	RIO2	P40160	425 aa	Known RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	YMR134W	P40207	237 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	GCD14	P46959	383 aa	Predicted RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	KTR6	P54070	446 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	YGK3	Q12222	375 aa	Predicted RBP	2.72	□□□□□ -1.97
PEX6	YNL329C	MRPS28	P21771	286 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	RPC37	P36121	282 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	SMF2	P38778	549 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	KRE9	P39005	276 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	MTM1	P53320	366 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	COS1	P53822	381 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	RIF2	Q06208	395 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	YDL109C	Q12103	647 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	TY3A-G	Q12173	290 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	TY3A-I	Q99219	290 aa		2.72	□□□□□ -1.97
PEX6	YNL329C	ARG80	P07249	177 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	MSS116	P15424	664 aa	Known RBP	2.71	□□□□□ -1.98
PEX6	YNL329C	FAR1	P21268	830 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	MEI5	P32489	222 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	KAR9	P32526	644 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	CSE2	P33308	149 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	LOH1	P47055	219 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	GTO1	P48239	356 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	KEL2	P50090	882 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	APC4	Q04601	652 aa		2.71	□□□□□ -1.98
PEX6	YNL329C	HRI1	Q05905	244 aa	Known RBP	2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 64 ms