RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C SOP4P39543 234 aaPredicted RBP3.9□□□□□ -1.78
CTF18YMR078C NRM1P53718 249 aa3.9□□□□□ -1.78
CTF18YMR078C SNX41Q04053 625 aa3.9□□□□□ -1.78
CTF18YMR078C BSC6Q08280 497 aa3.9□□□□□ -1.78
CTF18YMR078C RPC40P07703 335 aaKnown RBP3.9□□□□□ -1.79
CTF18YMR078C ASP3-2P0CX77 362 aa3.9□□□□□ -1.79
CTF18YMR078C ASP3-3P0CX78 362 aa3.9□□□□□ -1.79
CTF18YMR078C ASP3-4P0CX79 362 aa3.9□□□□□ -1.79
CTF18YMR078C ASP3-1P0CZ17 362 aa3.9□□□□□ -1.79
CTF18YMR078C PUT4P15380 627 aa3.9□□□□□ -1.79
CTF18YMR078C MEK1P24719 497 aaPredicted RBP3.9□□□□□ -1.79
CTF18YMR078C RPC25P35718 212 aa3.9□□□□□ -1.79
CTF18YMR078C GGC1P38988 300 aa3.9□□□□□ -1.79
CTF18YMR078C RRT13P40042 185 aa3.9□□□□□ -1.79
CTF18YMR078C SED5Q01590 340 aa3.9□□□□□ -1.79
CTF18YMR078C APC9Q12107 265 aa3.9□□□□□ -1.79
CTF18YMR078C YAL067W-AQ8TGK6 75 aa3.9□□□□□ -1.79
CTF18YMR078C GPI12P23797 304 aa3.89□□□□□ -1.79
CTF18YMR078C SPS19P32573 292 aaKnown RBP3.89□□□□□ -1.79
CTF18YMR078C VHS1Q03785 461 aa3.89□□□□□ -1.79
CTF18YMR078C APC4Q04601 652 aa3.89□□□□□ -1.79
CTF18YMR078C GAL7P08431 366 aa3.89□□□□□ -1.79
CTF18YMR078C MCH2P36032 473 aa3.89□□□□□ -1.79
CTF18YMR078C SDS23P53172 527 aa3.89□□□□□ -1.79
CTF18YMR078C YPQ1Q12010 308 aa3.89□□□□□ -1.79
CTF18YMR078C SIA1Q12212 622 aa3.89□□□□□ -1.79
CTF18YMR078C EPT1P22140 391 aa3.88□□□□□ -1.79
CTF18YMR078C DBP7P36120 742 aaKnown RBP3.88□□□□□ -1.79
CTF18YMR078C YPC1P38298 316 aa3.88□□□□□ -1.79
CTF18YMR078C RRG9P40156 214 aa3.88□□□□□ -1.79
CTF18YMR078C YOL029CQ08187 201 aa3.88□□□□□ -1.79
CTF18YMR078C YKL070WP36087 169 aa3.87□□□□□ -1.79
CTF18YMR078C YGR266WP53326 701 aa3.87□□□□□ -1.79
CTF18YMR078C EGD1Q02642 157 aaKnown RBP3.87□□□□□ -1.79
CTF18YMR078C RNY1Q02933 434 aaKnown RBP3.87□□□□□ -1.79
CTF18YMR078C RRP36Q12481 300 aaPredicted RBP3.87□□□□□ -1.79
CTF18YMR078C RAD7P06779 565 aa3.87□□□□□ -1.79
CTF18YMR078C RPL31AP0C2H8 113 aaKnown RBP3.87□□□□□ -1.79
CTF18YMR078C EFM1P38732 585 aa3.87□□□□□ -1.79
CTF18YMR078C GDS1P41913 522 aa3.87□□□□□ -1.79
CTF18YMR078C COX16P47081 118 aa3.87□□□□□ -1.79
CTF18YMR078C YMR244WQ04018 355 aa3.87□□□□□ -1.79
CTF18YMR078C INP2Q03824 705 aa3.86□□□□□ -1.79
CTF18YMR078C VTI1Q04338 217 aa3.86□□□□□ -1.79
CTF18YMR078C ERD1P16151 362 aa3.86□□□□□ -1.79
CTF18YMR078C MRPL20P22354 195 aaPredicted RBP3.86□□□□□ -1.79
CTF18YMR078C YKL187CP34231 750 aa3.86□□□□□ -1.79
CTF18YMR078C YBR062CP38239 180 aa3.86□□□□□ -1.79
CTF18YMR078C GTO1P48239 356 aa3.86□□□□□ -1.79
CTF18YMR078C YNR066CP53752 436 aa3.86□□□□□ -1.79
CTF18YMR078C MCH1Q07376 486 aa3.86□□□□□ -1.79
CTF18YMR078C UTP23Q12339 254 aaKnown RBP3.86□□□□□ -1.79
CTF18YMR078C MRPS9P38120 278 aa3.85□□□□□ -1.79
CTF18YMR078C ECM34P38728 170 aa3.85□□□□□ -1.79
CTF18YMR078C RTT105P40063 208 aa3.85□□□□□ -1.79
CTF18YMR078C UBC13P52490 153 aa3.85□□□□□ -1.79
CTF18YMR078C DTD1Q07648 150 aaKnown RBP3.85□□□□□ -1.79
CTF18YMR078C YIL002W-AQ3E7Z5 69 aa3.85□□□□□ -1.79
CTF18YMR078C BI3Q9ZZW7 517 aa3.85□□□□□ -1.79
CTF18YMR078C ATP6P00854 259 aa3.85□□□□□ -1.79
CTF18YMR078C OM45P16547 393 aa3.85□□□□□ -1.79
CTF18YMR078C CTM1P38818 585 aa3.85□□□□□ -1.79
CTF18YMR078C YNL260CP53846 198 aa3.85□□□□□ -1.79
CTF18YMR078C INP1Q03694 420 aa3.85□□□□□ -1.79
CTF18YMR078C HPR1P17629 752 aaKnown RBP3.84□□□□□ -1.79
CTF18YMR078C GPX1P36014 167 aa3.84□□□□□ -1.79
CTF18YMR078C MID2P36027 376 aa3.84□□□□□ -1.79
CTF18YMR078C SWD2P36104 329 aaPredicted RBP3.84□□□□□ -1.79
CTF18YMR078C MND1P53102 219 aa3.84□□□□□ -1.79
CTF18YMR078C STE2D6VTK4 431 aa3.83□□□□□ -1.8
CTF18YMR078C TDH1P00360 332 aaKnown RBP3.83□□□□□ -1.8
CTF18YMR078C FRS2P15625 503 aaKnown RBP3.83□□□□□ -1.8
CTF18YMR078C FMP48P53233 369 aa3.83□□□□□ -1.8
CTF18YMR078C ECM19Q06011 112 aa3.83□□□□□ -1.8
CTF18YMR078C YLR446WQ06204 433 aa3.83□□□□□ -1.8
CTF18YMR078C CSM1P25651 190 aa3.83□□□□□ -1.8
CTF18YMR078C RFT1P38206 574 aaPredicted RBP3.83□□□□□ -1.8
CTF18YMR078C FMP33P46998 180 aa3.83□□□□□ -1.8
CTF18YMR078C YNL050CP53952 270 aa3.83□□□□□ -1.8
CTF18YMR078C TAZ1Q06510 381 aa3.83□□□□□ -1.8
CTF18YMR078C YDL012CQ12489 107 aa3.83□□□□□ -1.8
CTF18YMR078C YBL111CQ3E7Y5 667 aa3.83□□□□□ -1.8
CTF18YMR078C FLO11P08640 1367 aa3.83□□□□□ -1.8
CTF18YMR078C RPL16BP26785 198 aaKnown RBP3.82□□□□□ -1.8
CTF18YMR078C RIB7P33312 244 aa3.82□□□□□ -1.8
CTF18YMR078C HIS2P38635 335 aa3.82□□□□□ -1.8
CTF18YMR078C YGR067CP53243 804 aa3.82□□□□□ -1.8
CTF18YMR078C YOR292CQ08743 309 aa3.82□□□□□ -1.8
CTF18YMR078C YPL245WQ12179 454 aaKnown RBP3.82□□□□□ -1.8
CTF18YMR078C FMP16Q12497 93 aa3.82□□□□□ -1.8
CTF18YMR078C TDH3P00359 332 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CTF18YMR078C COX10P21592 462 aa3.82□□□□□ -1.8
CTF18YMR078C INO2P26798 304 aa3.82□□□□□ -1.8
CTF18YMR078C RPB9P27999 122 aa3.82□□□□□ -1.8
CTF18YMR078C SHQ1P40486 507 aaPredicted RBP3.82□□□□□ -1.8
CTF18YMR078C AGP3P43548 558 aa3.82□□□□□ -1.8
CTF18YMR078C BCP1Q06338 283 aa3.82□□□□□ -1.8
CTF18YMR078C PRP46Q12417 451 aaPredicted RBP3.82□□□□□ -1.8
CTF18YMR078C INO80P53115 1489 aa3.81□□□□□ -1.8
CTF18YMR078C IMP3P32899 183 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms