RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeast

Gene SEC13, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC13	YLR208W	YVC1	Q12324	675 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	MAK32	P23060	363 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	HXT2	P23585	541 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	REC114	P32841	428 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SPP381	P38282	291 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC13	YLR208W	LNP1	P38878	278 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	PRP39	P39682	629 aa	Known RBP	4.93	□□□□□ -1.62
SEC13	YLR208W	UTP25	P40498	721 aa	Known RBP	4.93	□□□□□ -1.62
SEC13	YLR208W	YIL001W	P40560	513 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SWP82	P43554	623 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	YAR1	P46683	200 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	MUP1	P50276	574 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SPP2	Q02521	185 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SHR3	Q02774	210 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	YMR209C	Q03648	457 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	COX20	Q04935	205 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SEC10	Q06245	871 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	ATG17	Q06410	417 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	SDO1	Q07953	250 aa	Known RBP	4.93	□□□□□ -1.62
SEC13	YLR208W	MED7	Q08278	222 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	PEX27	Q08580	376 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	DAS2	Q12084	232 aa		4.93	□□□□□ -1.62
SEC13	YLR208W	PAA1	Q12447	191 aa	Known RBP	4.93	□□□□□ -1.62
SEC13	YLR208W	RHO2	P06781	192 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	MET3	P08536	511 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	IMA3	P0CW40	589 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	IMA4	P0CW41	589 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	SAM35	P14693	329 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	FEN2	P25621	512 aa	Known RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	SUI1	P32911	108 aa	Known RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	DOA1	P36037	715 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	ICS2	P38284	255 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	RCK2	P38623	610 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	SPC97	P38863	823 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	VPS52	P39904	641 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	PCL6	P40038	420 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	RPL10	P41805	221 aa	Known RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	PTR3	P43606	678 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	MRX5	P47007	382 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	YJL118W	P47022	219 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	SEH1	P53011	349 aa	Known RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	ROG1	P53118	685 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	YGR079W	P53249	370 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	SLX9	P53251	210 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	POS5	Q06892	414 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	IMA2	Q08295	589 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	SLF1	Q12034	447 aa	Known RBP	4.92	□□□□□ -1.62
SEC13	YLR208W	RUP1	Q12242	671 aa		4.92	□□□□□ -1.62
SEC13	YLR208W	MATALPHA1	P0CY06	175 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	HMLALPHA1	P0CY07	175 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	GAS1	P22146	559 aa	Known RBP	4.91	□□□□□ -1.62
SEC13	YLR208W	RHB1	P25378	209 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	CDC20	P26309	610 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	EMP70	P32802	667 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	MTR2	P34232	184 aa	Known RBP	4.91	□□□□□ -1.62
SEC13	YLR208W	RTC2	P38279	296 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	IMD2	P38697	523 aa	Known RBP	4.91	□□□□□ -1.62
SEC13	YLR208W	YHI9	P38765	294 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	YHR122W	P38829	231 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	YMR134W	P40207	237 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	HXT9	P40885	567 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	ECO1	P43605	281 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	FMP33	P46998	180 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	STE24	P47154	453 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	PXR1	P53335	271 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13	YLR208W	HXT11	P54862	567 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	GMC2	Q06201	188 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	SYO1	Q07395	620 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	RSA1	Q08932	381 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	NCE102	Q12207	173 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
SEC13	YLR208W	RGT2	Q12300	763 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	SWM1	Q12379	170 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	YER175W-A	Q8TGU4	54 aa		4.91	□□□□□ -1.62
SEC13	YLR208W	COX2	P00410	251 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	RPL35A	P0CX84	120 aa	Known RBP	4.9	□□□□□ -1.63
SEC13	YLR208W	RPL35B	P0CX85	120 aa	Known RBP	4.9	□□□□□ -1.63
SEC13	YLR208W	STE18	P18852	110 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	RAD57	P25301	460 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	PEX3	P28795	441 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	SNU114	P36048	1008 aa	Known RBP	4.9	□□□□□ -1.63
SEC13	YLR208W	SDH8	P38345	138 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	EFM1	P38732	585 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	NPT1	P39683	429 aa	Known RBP	4.9	□□□□□ -1.63
SEC13	YLR208W	APQ12	P40532	138 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	PAC11	P40960	533 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	YJL043W	P47053	257 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	MDM34	P53083	459 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	MRP51	Q02950	344 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	PRM15	Q03262	622 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	YLR040C	Q07988	224 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	RRP40	Q08285	240 aa	Known RBP	4.9	□□□□□ -1.63
SEC13	YLR208W	GEP3	Q08622	556 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	YOR029W	Q12243	111 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	YLR108C	Q12259	485 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	INP53	Q12271	1107 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	SPO24	Q3E752	67 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	UBA3	Q99344	299 aa		4.9	□□□□□ -1.63
SEC13	YLR208W	CYC7	P00045	113 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	TRP3	P00937	484 aa		4.89	□□□□□ -1.63
SEC13	YLR208W	COR1	P07256	457 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms