RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W RRG7Q08774 242 aaPredicted RBP1.27□□□□□ -2.21
SMC4YLR086W SIA1Q12212 622 aa1.27□□□□□ -2.21
SMC4YLR086W DET1Q99288 334 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W UNG1P12887 359 aa1.27□□□□□ -2.21
SMC4YLR086W FRS2P15625 503 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W PET123P17558 318 aa1.27□□□□□ -2.21
SMC4YLR086W MIR1P23641 311 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W MEK1P24719 497 aaPredicted RBP1.27□□□□□ -2.21
SMC4YLR086W CIN8P27895 1000 aa1.27□□□□□ -2.21
SMC4YLR086W GCG1P32656 232 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W PDC2P32896 925 aa1.27□□□□□ -2.21
SMC4YLR086W YKL097CP34245 136 aa1.27□□□□□ -2.21
SMC4YLR086W RTC2P38279 296 aa1.27□□□□□ -2.21
SMC4YLR086W SPT8P38915 602 aa1.27□□□□□ -2.21
SMC4YLR086W MEP1P40260 492 aa1.27□□□□□ -2.21
SMC4YLR086W YIL067CP40514 678 aa1.27□□□□□ -2.21
SMC4YLR086W YFR057WP43625 151 aa1.27□□□□□ -2.21
SMC4YLR086W YJR085CP47131 105 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W PHB2P50085 310 aa1.27□□□□□ -2.21
SMC4YLR086W RRP46P53256 223 aaPredicted RBP1.27□□□□□ -2.21
SMC4YLR086W LSB1P53281 241 aa1.27□□□□□ -2.21
SMC4YLR086W YNL260CP53846 198 aa1.27□□□□□ -2.21
SMC4YLR086W RPL22BP56628 122 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W TRM82Q03774 444 aa1.27□□□□□ -2.21
SMC4YLR086W TSA2Q04120 196 aa1.27□□□□□ -2.21
SMC4YLR086W ARR1Q06596 294 aa1.27□□□□□ -2.21
SMC4YLR086W TY3A-GQ12173 290 aa1.27□□□□□ -2.21
SMC4YLR086W RPN6Q12377 434 aa1.27□□□□□ -2.21
SMC4YLR086W APC2Q12440 853 aa1.27□□□□□ -2.21
SMC4YLR086W TY3A-IQ99219 290 aa1.27□□□□□ -2.21
SMC4YLR086W SAL1D6W196 494 aa1.27□□□□□ -2.21
SMC4YLR086W TPI1P00942 248 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W NUP2P32499 720 aa1.27□□□□□ -2.21
SMC4YLR086W MCH2P36032 473 aa1.27□□□□□ -2.21
SMC4YLR086W SHE10P53075 577 aa1.27□□□□□ -2.21
SMC4YLR086W WSC2P53832 503 aa1.27□□□□□ -2.21
SMC4YLR086W GOR1P53839 350 aa1.27□□□□□ -2.21
SMC4YLR086W REX2P54964 269 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W YPL077CQ02831 240 aa1.27□□□□□ -2.21
SMC4YLR086W SCS7Q03529 384 aa1.27□□□□□ -2.21
SMC4YLR086W KAP95Q06142 861 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W RDL2Q08742 149 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W YDL109CQ12103 647 aa1.27□□□□□ -2.21
SMC4YLR086W YOR012WQ12351 137 aa1.27□□□□□ -2.21
SMC4YLR086W WTM1Q12363 437 aaKnown RBP1.27□□□□□ -2.21
SMC4YLR086W RPS19AP07280 144 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W RPS19BP07281 144 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W YLL053CP0CD98 152 aa1.26□□□□□ -2.21
SMC4YLR086W RPL23AP0CX41 137 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W RPL23BP0CX42 137 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W RPL18AP0CX49 186 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W RPL18BP0CX50 186 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W CKA2P19454 339 aa1.26□□□□□ -2.21
SMC4YLR086W CSE2P33308 149 aa1.26□□□□□ -2.21
SMC4YLR086W TIP20P33891 701 aa1.26□□□□□ -2.21
SMC4YLR086W VPS21P36017 210 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W CAB3P36076 571 aa1.26□□□□□ -2.21
SMC4YLR086W RPC37P36121 282 aa1.26□□□□□ -2.21
SMC4YLR086W SMF2P38778 549 aa1.26□□□□□ -2.21
SMC4YLR086W ATG7P38862 630 aa1.26□□□□□ -2.21
SMC4YLR086W HMF1P40037 129 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W CTK3P46963 296 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W LCB3P47013 409 aa1.26□□□□□ -2.21
SMC4YLR086W SEH1P53011 349 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W SHY1P53266 389 aa1.26□□□□□ -2.21
SMC4YLR086W PXR1P53335 271 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W YLR152CP54072 576 aa1.26□□□□□ -2.21
SMC4YLR086W PRP38Q00723 242 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W FRE8Q12209 686 aa1.26□□□□□ -2.21
SMC4YLR086W HRT3Q12347 344 aa1.26□□□□□ -2.21
SMC4YLR086W IZH2Q12442 317 aa1.26□□□□□ -2.21
SMC4YLR086W UTP10P42945 1769 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W REP1P03871 373 aa1.26□□□□□ -2.21
SMC4YLR086W IFM1P25038 676 aa1.26□□□□□ -2.21
SMC4YLR086W DEG1P31115 442 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W YPS1P32329 569 aa1.26□□□□□ -2.21
SMC4YLR086W PRS1P32895 427 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W CSE1P33307 960 aa1.26□□□□□ -2.21
SMC4YLR086W RCK1P38622 512 aa1.26□□□□□ -2.21
SMC4YLR086W YPT35P38815 214 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W VAB2P40003 282 aa1.26□□□□□ -2.21
SMC4YLR086W KAP114P53067 1004 aa1.26□□□□□ -2.21
SMC4YLR086W YNL247WP53852 767 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W NUP116Q02630 1113 aa1.26□□□□□ -2.21
SMC4YLR086W TRM44Q02648 567 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W SRL4Q03085 281 aa1.26□□□□□ -2.21
SMC4YLR086W YET2Q04210 160 aa1.26□□□□□ -2.21
SMC4YLR086W YHC1Q05900 231 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W RIO1Q12196 484 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W EFG1Q3E705 233 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W JIP3O13555 125 aa1.26□□□□□ -2.21
SMC4YLR086W CBP6P07253 162 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W SNA3P14359 133 aa1.26□□□□□ -2.21
SMC4YLR086W AAT2P23542 418 aaKnown RBP1.26□□□□□ -2.21
SMC4YLR086W YKL162CP36052 402 aa1.26□□□□□ -2.21
SMC4YLR086W YKL070WP36087 169 aa1.26□□□□□ -2.21
SMC4YLR086W RFT1P38206 574 aaPredicted RBP1.26□□□□□ -2.21
SMC4YLR086W MIC19P43594 170 aa1.26□□□□□ -2.21
SMC4YLR086W LIF1P53150 421 aa1.26□□□□□ -2.21
SMC4YLR086W YGR015CP53208 328 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms