RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C COX2P00410 251 aa1.88□□□□□ -2.11
UBP11YKR098C STE7P06784 515 aa1.88□□□□□ -2.11
UBP11YKR098C MSF1P08425 469 aa1.88□□□□□ -2.11
UBP11YKR098C POL30P15873 258 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C ZRC1P20107 442 aa1.88□□□□□ -2.11
UBP11YKR098C CMK2P22517 447 aa1.88□□□□□ -2.11
UBP11YKR098C YSR3P23501 404 aa1.88□□□□□ -2.11
UBP11YKR098C RPL16BP26785 198 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C URA10P30402 227 aa1.88□□□□□ -2.11
UBP11YKR098C DEP1P31385 405 aa1.88□□□□□ -2.11
UBP11YKR098C GCG1P32656 232 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C IMP3P32899 183 aaPredicted RBP1.88□□□□□ -2.11
UBP11YKR098C YPC1P38298 316 aa1.88□□□□□ -2.11
UBP11YKR098C OM14P38325 134 aa1.88□□□□□ -2.11
UBP11YKR098C PET8P38921 284 aa1.88□□□□□ -2.11
UBP11YKR098C YAR1P46683 200 aa1.88□□□□□ -2.11
UBP11YKR098C UBC13P52490 153 aa1.88□□□□□ -2.11
UBP11YKR098C YGR015CP53208 328 aa1.88□□□□□ -2.11
UBP11YKR098C TPC1P53257 314 aa1.88□□□□□ -2.11
UBP11YKR098C ENT5Q03769 411 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C COX20Q04935 205 aa1.88□□□□□ -2.11
UBP11YKR098C YLR173WQ06247 608 aa1.88□□□□□ -2.11
UBP11YKR098C RSA1Q08932 381 aa1.88□□□□□ -2.11
UBP11YKR098C TY3A-GQ12173 290 aa1.88□□□□□ -2.11
UBP11YKR098C YOL107WQ12239 342 aa1.88□□□□□ -2.11
UBP11YKR098C WTM1Q12363 437 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C TY3A-IQ99219 290 aa1.88□□□□□ -2.11
UBP11YKR098C IZH4Q99393 312 aa1.88□□□□□ -2.11
UBP11YKR098C SSK22P25390 1331 aaPredicted RBP1.88□□□□□ -2.11
UBP11YKR098C YKL071WP36086 256 aa1.88□□□□□ -2.11
UBP11YKR098C RPC37P36121 282 aa1.88□□□□□ -2.11
UBP11YKR098C SHE1P38200 338 aa1.88□□□□□ -2.11
UBP11YKR098C SPT8P38915 602 aa1.88□□□□□ -2.11
UBP11YKR098C YJL118WP47022 219 aa1.88□□□□□ -2.11
UBP11YKR098C TIS11P47977 285 aa1.88□□□□□ -2.11
UBP11YKR098C KAP114P53067 1004 aa1.88□□□□□ -2.11
UBP11YKR098C GRX3Q03835 250 aa1.88□□□□□ -2.11
UBP11YKR098C GMC2Q06201 188 aa1.88□□□□□ -2.11
UBP11YKR098C GPN3Q06543 272 aa1.88□□□□□ -2.11
UBP11YKR098C RPN8Q08723 338 aaKnown RBP1.88□□□□□ -2.11
UBP11YKR098C RBD2Q12270 262 aa1.88□□□□□ -2.11
UBP11YKR098C ERD1P16151 362 aa1.87□□□□□ -2.11
UBP11YKR098C IME2P32581 645 aa1.87□□□□□ -2.11
UBP11YKR098C SKG6P32900 734 aaPredicted RBP1.87□□□□□ -2.11
UBP11YKR098C CBF5P33322 483 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
UBP11YKR098C YBR241CP38142 488 aa1.87□□□□□ -2.11
UBP11YKR098C PRM9P39551 298 aa1.87□□□□□ -2.11
UBP11YKR098C SWC4P53201 476 aa1.87□□□□□ -2.11
UBP11YKR098C VHT1P53241 593 aa1.87□□□□□ -2.11
UBP11YKR098C LIP2Q06005 328 aa1.87□□□□□ -2.11
UBP11YKR098C MHP1P43638 1398 aa1.87□□□□□ -2.11
UBP11YKR098C INO2P26798 304 aa1.86□□□□□ -2.11
UBP11YKR098C SOL2P37262 315 aa1.86□□□□□ -2.11
UBP11YKR098C WSC4P38739 605 aa1.86□□□□□ -2.11
UBP11YKR098C TDA11P38854 504 aa1.86□□□□□ -2.11
UBP11YKR098C YNL134CP53912 376 aaKnown RBP1.86□□□□□ -2.11
UBP11YKR098C RMI1Q02685 241 aa1.86□□□□□ -2.11
UBP11YKR098C YMR209CQ03648 457 aa1.86□□□□□ -2.11
UBP11YKR098C VBA1Q04301 562 aa1.86□□□□□ -2.11
UBP11YKR098C YLR446WQ06204 433 aa1.86□□□□□ -2.11
UBP11YKR098C CTS2Q06350 511 aa1.86□□□□□ -2.11
UBP11YKR098C TAZ1Q06510 381 aa1.86□□□□□ -2.11
UBP11YKR098C DTD1Q07648 150 aaKnown RBP1.86□□□□□ -2.11
UBP11YKR098C MIM1Q08176 113 aa1.86□□□□□ -2.11
UBP11YKR098C POM33Q12164 279 aa1.86□□□□□ -2.11
UBP11YKR098C RPL21BQ12672 160 aaKnown RBP1.86□□□□□ -2.11
UBP11YKR098C ILV1P00927 576 aaKnown RBP1.86□□□□□ -2.11
UBP11YKR098C TFS1P14306 219 aa1.86□□□□□ -2.11
UBP11YKR098C MRPL20P22354 195 aaPredicted RBP1.86□□□□□ -2.11
UBP11YKR098C BMT2P38278 337 aa1.86□□□□□ -2.11
UBP11YKR098C TAE1P38340 232 aa1.86□□□□□ -2.11
UBP11YKR098C ALD5P40047 520 aaKnown RBP1.86□□□□□ -2.11
UBP11YKR098C COA1P40452 197 aa1.86□□□□□ -2.11
UBP11YKR098C STB1P42845 420 aa1.86□□□□□ -2.11
UBP11YKR098C IGD1P43598 195 aa1.86□□□□□ -2.11
UBP11YKR098C PGU1P47180 361 aa1.86□□□□□ -2.11
UBP11YKR098C ADD37Q03233 198 aa1.86□□□□□ -2.11
UBP11YKR098C YPR064WQ12492 139 aa1.86□□□□□ -2.11
UBP11YKR098C BI3Q9ZZW7 517 aa1.86□□□□□ -2.11
UBP11YKR098C SHE3P38272 425 aaKnown RBP1.85□□□□□ -2.11
UBP11YKR098C YPT32P51996 222 aaKnown RBP1.85□□□□□ -2.11
UBP11YKR098C CPD1P53314 239 aa1.85□□□□□ -2.11
UBP11YKR098C YNR066CP53752 436 aa1.85□□□□□ -2.11
UBP11YKR098C RNH201P53942 307 aa1.85□□□□□ -2.11
UBP11YKR098C YNL040WP53960 456 aaPredicted RBP1.85□□□□□ -2.11
UBP11YKR098C CDC14Q00684 551 aa1.85□□□□□ -2.11
UBP11YKR098C SRL4Q03085 281 aa1.85□□□□□ -2.11
UBP11YKR098C YDR115WQ04598 105 aa1.85□□□□□ -2.11
UBP11YKR098C BOP2Q06150 570 aa1.85□□□□□ -2.11
UBP11YKR098C BTS1Q12051 335 aa1.85□□□□□ -2.11
UBP11YKR098C RRP42Q12277 265 aaPredicted RBP1.85□□□□□ -2.11
UBP11YKR098C MED4Q12343 284 aa1.85□□□□□ -2.11
UBP11YKR098C BGL2P15703 313 aaKnown RBP1.85□□□□□ -2.11
UBP11YKR098C MET16P18408 261 aaPredicted RBP1.85□□□□□ -2.11
UBP11YKR098C RRT12P25381 491 aa1.85□□□□□ -2.11
UBP11YKR098C CWP1P28319 239 aa1.85□□□□□ -2.11
UBP11YKR098C YEL045CP32616 141 aa1.85□□□□□ -2.11
UBP11YKR098C SPT4P32914 102 aaPredicted RBP1.85□□□□□ -2.11
UBP11YKR098C YHR045WP38775 560 aa1.85□□□□□ -2.11
UBP11YKR098C NPT1P39683 429 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms