RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C PPQ1P32945 549 aa2.68□□□□□ -1.98
RPF2YKR081C MED8P38304 223 aa2.68□□□□□ -1.98
RPF2YKR081C ASP1P38986 381 aaPredicted RBP2.68□□□□□ -1.98
RPF2YKR081C HSH155P49955 971 aaKnown RBP2.68□□□□□ -1.98
RPF2YKR081C TAF6P53040 516 aa2.68□□□□□ -1.98
RPF2YKR081C CUE3P53137 624 aaKnown RBP2.68□□□□□ -1.98
RPF2YKR081C PXR1P53335 271 aaPredicted RBP2.68□□□□□ -1.98
RPF2YKR081C YNL146WP53906 100 aa2.68□□□□□ -1.98
RPF2YKR081C RDL2Q08742 149 aaKnown RBP2.68□□□□□ -1.98
RPF2YKR081C SPO24Q3E752 67 aa2.68□□□□□ -1.98
RPF2YKR081C TAL1P15019 335 aaKnown RBP2.67□□□□□ -1.98
RPF2YKR081C DAL81P21657 970 aa2.67□□□□□ -1.98
RPF2YKR081C MRPL20P22354 195 aaPredicted RBP2.67□□□□□ -1.98
RPF2YKR081C ARO4P32449 370 aaKnown RBP2.67□□□□□ -1.98
RPF2YKR081C SMC2P38989 1170 aaKnown RBP2.67□□□□□ -1.98
RPF2YKR081C SHE4P51534 789 aa2.67□□□□□ -1.98
RPF2YKR081C YGL114WP53134 725 aa2.67□□□□□ -1.98
RPF2YKR081C YGL088WP53151 121 aa2.67□□□□□ -1.98
RPF2YKR081C YPL113CQ02961 396 aa2.67□□□□□ -1.98
RPF2YKR081C YPL245WQ12179 454 aaKnown RBP2.67□□□□□ -1.98
RPF2YKR081C NFI1Q12216 726 aa2.67□□□□□ -1.98
RPF2YKR081C SPS100P13130 326 aa2.66□□□□□ -1.98
RPF2YKR081C CSE1P33307 960 aa2.66□□□□□ -1.98
RPF2YKR081C SCC4P40090 624 aa2.66□□□□□ -1.98
RPF2YKR081C YIL089WP40500 205 aa2.66□□□□□ -1.98
RPF2YKR081C MIG1P27705 504 aa2.65□□□□□ -1.99
RPF2YKR081C POT1P27796 417 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
RPF2YKR081C VMA5P31412 392 aaKnown RBP2.65□□□□□ -1.99
RPF2YKR081C ACB1P31787 87 aa2.65□□□□□ -1.99
RPF2YKR081C SIF2P38262 535 aa2.65□□□□□ -1.99
RPF2YKR081C YFR045WP43617 309 aa2.65□□□□□ -1.99
RPF2YKR081C ACT1P60010 375 aaKnown RBP2.65□□□□□ -1.99
RPF2YKR081C RVB1Q03940 463 aaKnown RBP2.65□□□□□ -1.99
RPF2YKR081C YDR114CQ04597 100 aa2.65□□□□□ -1.99
RPF2YKR081C DXO1Q06349 442 aa2.65□□□□□ -1.99
RPF2YKR081C RLP24Q07915 199 aaKnown RBP2.65□□□□□ -1.99
RPF2YKR081C YLR012CQ07927 99 aa2.65□□□□□ -1.99
RPF2YKR081C FYV8P46949 817 aaKnown RBP2.64□□□□□ -1.99
RPF2YKR081C YNR066CP53752 436 aa2.64□□□□□ -1.99
RPF2YKR081C YDR262WQ12331 272 aa2.64□□□□□ -1.99
RPF2YKR081C IES3Q12345 250 aa2.64□□□□□ -1.99
RPF2YKR081C ERP3Q12403 225 aa2.64□□□□□ -1.99
RPF2YKR081C CBP2P03874 630 aaPredicted RBP2.63□□□□□ -1.99
RPF2YKR081C EDC2P40023 145 aaPredicted RBP2.63□□□□□ -1.99
RPF2YKR081C ECO1P43605 281 aa2.63□□□□□ -1.99
RPF2YKR081C YGR016WP53209 190 aa2.63□□□□□ -1.99
RPF2YKR081C YNL040WP53960 456 aaPredicted RBP2.63□□□□□ -1.99
RPF2YKR081C MET2P08465 486 aa2.62□□□□□ -1.99
RPF2YKR081C PDR16P53860 351 aaKnown RBP2.62□□□□□ -1.99
RPF2YKR081C UBX2Q04228 584 aa2.62□□□□□ -1.99
RPF2YKR081C BUR2Q05949 395 aa2.62□□□□□ -1.99
RPF2YKR081C PML1Q07930 204 aaPredicted RBP2.62□□□□□ -1.99
RPF2YKR081C YEL043WP32618 956 aa2.61□□□□□ -1.99
RPF2YKR081C SUR1P33300 382 aa2.61□□□□□ -1.99
RPF2YKR081C PET8P38921 284 aa2.61□□□□□ -1.99
RPF2YKR081C VIK1Q12045 647 aa2.61□□□□□ -1.99
RPF2YKR081C TDH2P00358 332 aaKnown RBP2.6□□□□□ -1.99
RPF2YKR081C TDH3P00359 332 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
RPF2YKR081C RNR2P09938 399 aaKnown RBP2.6□□□□□ -1.99
RPF2YKR081C ERD1P16151 362 aa2.6□□□□□ -1.99
RPF2YKR081C VPH2P32341 215 aa2.6□□□□□ -1.99
RPF2YKR081C YKR032WP36127 104 aa2.6□□□□□ -1.99
RPF2YKR081C YPL080CQ02826 108 aa2.6□□□□□ -1.99
RPF2YKR081C MRX4Q12467 430 aa2.6□□□□□ -1.99
RPF2YKR081C RSA4P25382 515 aaKnown RBP2.59□□□□□ -1.99
RPF2YKR081C AIM29P36154 155 aa2.59□□□□□ -1.99
RPF2YKR081C APE4P38821 490 aa2.59□□□□□ -1.99
RPF2YKR081C LIN1P38852 340 aaPredicted RBP2.59□□□□□ -1.99
RPF2YKR081C PSY3Q12318 242 aa2.59□□□□□ -1.99
RPF2YKR081C KRE1P17260 313 aa2.58□□□□□ -2
RPF2YKR081C SOP4P39543 234 aaPredicted RBP2.58□□□□□ -2
RPF2YKR081C UFD1P53044 361 aa2.58□□□□□ -2
RPF2YKR081C YGR168CP53293 376 aa2.58□□□□□ -2
RPF2YKR081C IRC4Q03036 179 aa2.58□□□□□ -2
RPF2YKR081C MIX17Q03667 156 aa2.58□□□□□ -2
RPF2YKR081C SEC13Q04491 297 aaKnown RBP2.58□□□□□ -2
RPF2YKR081C CLP1Q08685 445 aaPredicted RBP2.58□□□□□ -2
RPF2YKR081C YOR292CQ08743 309 aa2.58□□□□□ -2
RPF2YKR081C PES4P39684 611 aa2.57□□□□□ -2
RPF2YKR081C YFL040WP43562 540 aa2.57□□□□□ -2
RPF2YKR081C YOL163WP0CF20 169 aa2.56□□□□□ -2
RPF2YKR081C CDC42P19073 191 aa2.56□□□□□ -2
RPF2YKR081C PRE7P23724 241 aaKnown RBP2.56□□□□□ -2
RPF2YKR081C YHL044WP38727 235 aa2.56□□□□□ -2
RPF2YKR081C YHR035WP38769 630 aa2.56□□□□□ -2
RPF2YKR081C INA22P40576 216 aa2.56□□□□□ -2
RPF2YKR081C ARC18Q05933 178 aaKnown RBP2.56□□□□□ -2
RPF2YKR081C PEX30Q06169 523 aa2.56□□□□□ -2
RPF2YKR081C FEX1Q08913 375 aa2.56□□□□□ -2
RPF2YKR081C FEX2Q08991 375 aa2.56□□□□□ -2
RPF2YKR081C YAK1P14680 807 aa2.55□□□□□ -2
RPF2YKR081C MRPL6P32904 214 aa2.55□□□□□ -2
RPF2YKR081C UIP5P36137 443 aa2.55□□□□□ -2
RPF2YKR081C LIF1P53150 421 aa2.55□□□□□ -2
RPF2YKR081C SNX41Q04053 625 aa2.55□□□□□ -2
RPF2YKR081C LAG2Q92325 660 aa2.55□□□□□ -2
RPF2YKR081C RPL18AP0CX49 186 aaKnown RBP2.54□□□□□ -2
RPF2YKR081C RPL18BP0CX50 186 aaKnown RBP2.54□□□□□ -2
RPF2YKR081C GAL3P13045 520 aa2.54□□□□□ -2
RPF2YKR081C YER084WP40057 128 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms