RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C MRH1Q12117 320 aaPredicted RBP4.53□□□□□ -1.68
CAF4YKR036C YOL114CQ12322 202 aa4.53□□□□□ -1.68
CAF4YKR036C AHA1Q12449 350 aaKnown RBP4.53□□□□□ -1.68
CAF4YKR036C SNF8Q12483 233 aa4.53□□□□□ -1.68
CAF4YKR036C MHT1Q12525 324 aa4.53□□□□□ -1.68
CAF4YKR036C HTA1P04911 132 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C PUT1P09368 476 aa4.52□□□□□ -1.69
CAF4YKR036C YOL163WP0CF20 169 aa4.52□□□□□ -1.69
CAF4YKR036C MATALPHA1P0CY06 175 aa4.52□□□□□ -1.69
CAF4YKR036C HMLALPHA1P0CY07 175 aa4.52□□□□□ -1.69
CAF4YKR036C CDC34P14682 295 aa4.52□□□□□ -1.69
CAF4YKR036C SEC22P22214 214 aa4.52□□□□□ -1.69
CAF4YKR036C DEG1P31115 442 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C CDC12P32468 407 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C MRP21P38175 177 aa4.52□□□□□ -1.69
CAF4YKR036C AIM3P38266 947 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C MTC4P38335 694 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C UIP3P39547 235 aa4.52□□□□□ -1.69
CAF4YKR036C GCV3P39726 170 aaPredicted RBP4.52□□□□□ -1.69
CAF4YKR036C GET2P40056 285 aa4.52□□□□□ -1.69
CAF4YKR036C KTR7P40504 517 aa4.52□□□□□ -1.69
CAF4YKR036C VMA21P41806 77 aa4.52□□□□□ -1.69
CAF4YKR036C IME4P41833 600 aa4.52□□□□□ -1.69
CAF4YKR036C AGX1P43567 385 aa4.52□□□□□ -1.69
CAF4YKR036C STE24P47154 453 aa4.52□□□□□ -1.69
CAF4YKR036C PHB2P50085 310 aa4.52□□□□□ -1.69
CAF4YKR036C VPS73P53142 486 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C VOA1P53262 265 aa4.52□□□□□ -1.69
CAF4YKR036C TPS1Q00764 495 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C RUB1Q03919 77 aa4.52□□□□□ -1.69
CAF4YKR036C ECM22Q05958 814 aaPredicted RBP4.52□□□□□ -1.69
CAF4YKR036C YLR173WQ06247 608 aa4.52□□□□□ -1.69
CAF4YKR036C ATG41Q12048 136 aa4.52□□□□□ -1.69
CAF4YKR036C MRX4Q12467 430 aa4.52□□□□□ -1.69
CAF4YKR036C EFG1Q3E705 233 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C YPR014CQ6B0W2 109 aa4.52□□□□□ -1.69
CAF4YKR036C RPP1BP10622 106 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C PET9P18239 318 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C FUN14P18411 198 aa4.52□□□□□ -1.69
CAF4YKR036C ZRC1P20107 442 aa4.52□□□□□ -1.69
CAF4YKR036C RRP7P25368 297 aaPredicted RBP4.52□□□□□ -1.69
CAF4YKR036C LRE1P25579 583 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C VBA3P25594 458 aa4.52□□□□□ -1.69
CAF4YKR036C GUT1P32190 709 aa4.52□□□□□ -1.69
CAF4YKR036C SUA5P32579 426 aa4.52□□□□□ -1.69
CAF4YKR036C DSS4P32601 143 aa4.52□□□□□ -1.69
CAF4YKR036C CLB6P32943 380 aa4.52□□□□□ -1.69
CAF4YKR036C MSN4P33749 630 aa4.52□□□□□ -1.69
CAF4YKR036C MRPL28P36527 147 aa4.52□□□□□ -1.69
CAF4YKR036C HTD2P38790 280 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C ALG8P40351 577 aa4.52□□□□□ -1.69
CAF4YKR036C SSU1P41930 458 aa4.52□□□□□ -1.69
CAF4YKR036C RMD8P43620 662 aa4.52□□□□□ -1.69
CAF4YKR036C DPB11P47027 764 aaPredicted RBP4.52□□□□□ -1.69
CAF4YKR036C YHC3P47040 408 aa4.52□□□□□ -1.69
CAF4YKR036C YJR111CP47148 283 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C TOM22P49334 152 aa4.52□□□□□ -1.69
CAF4YKR036C RHO4Q00246 291 aa4.52□□□□□ -1.69
CAF4YKR036C MET14Q02196 202 aa4.52□□□□□ -1.69
CAF4YKR036C TRS31Q03337 283 aa4.52□□□□□ -1.69
CAF4YKR036C GOT1Q03554 138 aa4.52□□□□□ -1.69
CAF4YKR036C RBS1Q05672 457 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C YLR346CQ06139 101 aa4.52□□□□□ -1.69
CAF4YKR036C HBT1Q07653 1046 aaKnown RBP4.52□□□□□ -1.69
CAF4YKR036C RDI1Q12434 202 aa4.52□□□□□ -1.69
CAF4YKR036C ERP4Q12450 207 aa4.52□□□□□ -1.69
CAF4YKR036C RAS2P01120 322 aaKnown RBP4.51□□□□□ -1.69
CAF4YKR036C DST1P07273 309 aa4.51□□□□□ -1.69
CAF4YKR036C FPR1P20081 114 aaKnown RBP4.51□□□□□ -1.69
CAF4YKR036C PRE7P23724 241 aaKnown RBP4.51□□□□□ -1.69
CAF4YKR036C RER1P25560 188 aa4.51□□□□□ -1.69
CAF4YKR036C YCR099CP25657 155 aa4.51□□□□□ -1.69
CAF4YKR036C ADE1P27616 306 aa4.51□□□□□ -1.69
CAF4YKR036C COQ3P27680 312 aa4.51□□□□□ -1.69
CAF4YKR036C PRE4P30657 266 aa4.51□□□□□ -1.69
CAF4YKR036C RTC2P38279 296 aa4.51□□□□□ -1.69
CAF4YKR036C EHT1P38295 451 aa4.51□□□□□ -1.69
CAF4YKR036C YHR122WP38829 231 aa4.51□□□□□ -1.69
CAF4YKR036C ASP1P38986 381 aaPredicted RBP4.51□□□□□ -1.69
CAF4YKR036C CFD1P40558 293 aa4.51□□□□□ -1.69
CAF4YKR036C CIN5P40917 295 aa4.51□□□□□ -1.69
CAF4YKR036C PAM16P42949 149 aa4.51□□□□□ -1.69
CAF4YKR036C LOH1P47055 219 aa4.51□□□□□ -1.69
CAF4YKR036C AIM25P47140 327 aa4.51□□□□□ -1.69
CAF4YKR036C ADO1P47143 340 aaKnown RBP4.51□□□□□ -1.69
CAF4YKR036C PAC10P48363 199 aa4.51□□□□□ -1.69
CAF4YKR036C YGL185CP53100 379 aa4.51□□□□□ -1.69
CAF4YKR036C SYF2P53277 215 aaPredicted RBP4.51□□□□□ -1.69
CAF4YKR036C YNR065CP53751 1116 aa4.51□□□□□ -1.69
CAF4YKR036C NUP100Q02629 959 aa4.51□□□□□ -1.69
CAF4YKR036C YTM1Q12024 460 aaPredicted RBP4.51□□□□□ -1.69
CAF4YKR036C PIN2Q12057 282 aa4.51□□□□□ -1.69
CAF4YKR036C TIR4Q12218 487 aaPredicted RBP4.51□□□□□ -1.69
CAF4YKR036C RRI1Q12468 440 aa4.51□□□□□ -1.69
CAF4YKR036C HTB1P02293 131 aaKnown RBP4.5□□□□□ -1.69
CAF4YKR036C HTB2P02294 131 aa4.5□□□□□ -1.69
CAF4YKR036C SEC12P11655 471 aa4.5□□□□□ -1.69
CAF4YKR036C EPT1P22140 391 aa4.5□□□□□ -1.69
CAF4YKR036C PRE9P23638 258 aaKnown RBP4.5□□□□□ -1.69
CAF4YKR036C YIH1P25637 258 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms