RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YAT2P40017 923 aa1.81□□□□□ -2.12
RTT101YJL047C GAT1P43574 510 aa1.81□□□□□ -2.12
RTT101YJL047C YJL043WP47053 257 aa1.81□□□□□ -2.12
RTT101YJL047C ORC5P50874 479 aa1.81□□□□□ -2.12
RTT101YJL047C MST27P53176 234 aa1.81□□□□□ -2.12
RTT101YJL047C MSO1P53604 210 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C MRS2Q01926 470 aa1.81□□□□□ -2.12
RTT101YJL047C YPL077CQ02831 240 aa1.81□□□□□ -2.12
RTT101YJL047C SNO1Q03144 224 aa1.81□□□□□ -2.12
RTT101YJL047C ECM11Q04110 302 aa1.81□□□□□ -2.12
RTT101YJL047C YMR114CQ04471 368 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C TAZ1Q06510 381 aa1.81□□□□□ -2.12
RTT101YJL047C POM152P39685 1337 aa1.81□□□□□ -2.12
RTT101YJL047C SIR4P11978 1358 aa1.81□□□□□ -2.12
RTT101YJL047C ILV1P00927 576 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C PUT1P09368 476 aa1.81□□□□□ -2.12
RTT101YJL047C TUB1P09733 447 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C RPL20AP0CX23 172 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C RPL20BP0CX24 172 aaPredicted RBP1.81□□□□□ -2.12
RTT101YJL047C URA6P15700 204 aa1.81□□□□□ -2.12
RTT101YJL047C SPO11P23179 398 aa1.81□□□□□ -2.12
RTT101YJL047C NAM9P27929 486 aa1.81□□□□□ -2.12
RTT101YJL047C NTF2P33331 125 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C YOX1P34161 385 aa1.81□□□□□ -2.12
RTT101YJL047C YKL063CP35725 167 aa1.81□□□□□ -2.12
RTT101YJL047C FRE2P36033 711 aa1.81□□□□□ -2.12
RTT101YJL047C RIB5P38145 238 aa1.81□□□□□ -2.12
RTT101YJL047C YHK8P38776 514 aa1.81□□□□□ -2.12
RTT101YJL047C TRM5P38793 499 aa1.81□□□□□ -2.12
RTT101YJL047C GEP4P38812 185 aa1.81□□□□□ -2.12
RTT101YJL047C HAT2P39984 401 aa1.81□□□□□ -2.12
RTT101YJL047C COX15P40086 486 aa1.81□□□□□ -2.12
RTT101YJL047C AGE2P40529 298 aa1.81□□□□□ -2.12
RTT101YJL047C RPL10P41805 221 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C YJR149WP47177 404 aa1.81□□□□□ -2.12
RTT101YJL047C MAL13P53338 473 aa1.81□□□□□ -2.12
RTT101YJL047C ECI1Q05871 280 aa1.81□□□□□ -2.12
RTT101YJL047C ARC18Q05933 178 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C BNA5Q05979 453 aa1.81□□□□□ -2.12
RTT101YJL047C MRPL51Q06090 140 aaPredicted RBP1.81□□□□□ -2.12
RTT101YJL047C CTR3Q06686 241 aa1.81□□□□□ -2.12
RTT101YJL047C YAP7Q08182 245 aa1.81□□□□□ -2.12
RTT101YJL047C PER33Q12144 273 aa1.81□□□□□ -2.12
RTT101YJL047C ACF2Q12168 779 aa1.81□□□□□ -2.12
RTT101YJL047C JLP1Q12358 412 aa1.81□□□□□ -2.12
RTT101YJL047C WTM1Q12363 437 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C PAB1P04147 577 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
RTT101YJL047C QCR2P07257 368 aa1.8□□□□□ -2.12
RTT101YJL047C SPS100P13130 326 aa1.8□□□□□ -2.12
RTT101YJL047C AMD1P15274 810 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C CPT1P17898 393 aa1.8□□□□□ -2.12
RTT101YJL047C CDC10P25342 322 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C HOM6P31116 359 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C TPS2P31688 896 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C YMC1P32331 307 aa1.8□□□□□ -2.12
RTT101YJL047C YEF1P32622 495 aa1.8□□□□□ -2.12
RTT101YJL047C TIR2P33890 251 aa1.8□□□□□ -2.12
RTT101YJL047C POP7P38291 140 aa1.8□□□□□ -2.12
RTT101YJL047C OSH3P38713 996 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C YHR035WP38769 630 aa1.8□□□□□ -2.12
RTT101YJL047C VPS52P39904 641 aa1.8□□□□□ -2.12
RTT101YJL047C PAC2P39937 518 aa1.8□□□□□ -2.12
RTT101YJL047C JLP2P40206 208 aa1.8□□□□□ -2.12
RTT101YJL047C YJR030CP47101 745 aa1.8□□□□□ -2.12
RTT101YJL047C MIC26P50087 233 aa1.8□□□□□ -2.12
RTT101YJL047C MNN10P50108 393 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C YNR048WP53740 393 aa1.8□□□□□ -2.12
RTT101YJL047C YLR460CP54007 376 aa1.8□□□□□ -2.12
RTT101YJL047C SNX41Q04053 625 aa1.8□□□□□ -2.12
RTT101YJL047C TPO3Q06451 622 aa1.8□□□□□ -2.12
RTT101YJL047C YPR147CQ06522 304 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C BSC1Q12140 328 aa1.8□□□□□ -2.12
RTT101YJL047C RIO1Q12196 484 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C RPN6Q12377 434 aa1.8□□□□□ -2.12
RTT101YJL047C DCN1Q12395 269 aa1.8□□□□□ -2.12
RTT101YJL047C RPL28P02406 149 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C YCR100CP25606 316 aa1.8□□□□□ -2.12
RTT101YJL047C SPT4P32914 102 aaPredicted RBP1.8□□□□□ -2.12
RTT101YJL047C PHD1P36093 366 aa1.8□□□□□ -2.12
RTT101YJL047C ECM8P38246 354 aa1.8□□□□□ -2.12
RTT101YJL047C FZO1P38297 855 aa1.8□□□□□ -2.12
RTT101YJL047C TDA11P38854 504 aa1.8□□□□□ -2.12
RTT101YJL047C VAB2P40003 282 aa1.8□□□□□ -2.12
RTT101YJL047C YIA6P40556 373 aa1.8□□□□□ -2.12
RTT101YJL047C MRPL49P40858 161 aaPredicted RBP1.8□□□□□ -2.12
RTT101YJL047C TES1P41903 349 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C PMT4P46971 762 aa1.8□□□□□ -2.12
RTT101YJL047C ASG7P46993 209 aa1.8□□□□□ -2.12
RTT101YJL047C YJR012CP47087 207 aa1.8□□□□□ -2.12
RTT101YJL047C YJR141WP47172 347 aaPredicted RBP1.8□□□□□ -2.12
RTT101YJL047C UBC13P52490 153 aa1.8□□□□□ -2.12
RTT101YJL047C USE1P53146 245 aa1.8□□□□□ -2.12
RTT101YJL047C PEX31P53203 462 aa1.8□□□□□ -2.12
RTT101YJL047C VHT1P53241 593 aa1.8□□□□□ -2.12
RTT101YJL047C YMR206WQ03695 313 aa1.8□□□□□ -2.12
RTT101YJL047C YMR166CQ03829 368 aa1.8□□□□□ -2.12
RTT101YJL047C YDL144CQ07589 356 aa1.8□□□□□ -2.12
RTT101YJL047C YLR012CQ07927 99 aa1.8□□□□□ -2.12
RTT101YJL047C YOL073CQ08232 322 aa1.8□□□□□ -2.12
RTT101YJL047C SGT1Q08446 395 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms